| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300631
Identifier: 146300631
GI number: 146300631
Start: 3420825
End: 3421823
Strand: Reverse
Name: 146300631
Synonym: Fjoh_2882
Alternate gene names: NA
Gene position: 3421823-3420825 (Counterclockwise)
Preceding gene: 146300633
Following gene: 146300629
Centisome position: 56.12
GC content: 34.53
Gene sequence:
>999_bases ATGAAAAAAATCCAAATGAGACCAAAATTAATCGCTTTCGGTGCTTTAATTATTGGCTTTTTTATGCTATCATGGGGAAA TGTAGGCCATGAACGTATTAATAAAGCAGCTGTAATGGCTTTACCAAAACAATTGCAAATATTTTTCTACAATCACATTG ATTTTATTACACAGGAAGCTTCGGTTCCAGATATCCGAAAATATGCTTTAAATTATAAAGAAGAAGGTCCCAGACACTAT TTTGATATGGAAAACTTTGGTGCTGCTGACACTTATCCGCAGACACTAGAAGAAGCAAAACAAAAATACGATGCTAAATT TTTAAGTGATAACGGAATCCTGCCTTGGTACATCGAAGACATGATGGCAAAGCTGACTAAAGCTTTTAAGGAAAAAAACA GAGCCGAAATCTTATTTCTTGCAGCAGATTTAGGTCATTATGTAGGTGATGCACATATGCCATTGCATACATCTGCAAAT CACGACGGACAGTTAACGGATCAAAAAGGAATTCACTCTCTTTGGGAAAGCAGACTTCCTGAATTATTCGTTAAAAATTA CAAATTAAACGTTCCTGAGGCACAGTATTATACAGATGTTCATAAAGCAATCTGGGACATGATTAACGACACACACAGCT TTGCACAGCCTTTATTAGATATTGATAAAAGTTTAAGAACTGCAACTCCGCAGGACAAAGTATTTAAATTAGATGCTGAA GGTAAAGTATTGAAAAGCAAATATAACACAGCTGTTTTCTCTGATGAATATGCTAAAAAATTGCACGAACAATTAAATGG AATGGTAGAAACTCAAATGAGAAAAGCTATTACTGCAACGGCAAGTTTTTGGTATACTGCCTGGGTAAATGCAGGAAAAC CAGATTTAAGCGATTTAGATGCGCCAGCAGTTACACAAAGAAATTATCAATCTTTACAAGATGATTTAATACTGTATAAA AAAGGAGATTTATTCGGAATGAAAAATCAAAACGACTAA
Upstream 100 bases:
>100_bases TCAAAAATTAAAAATGTTAAAATAGTAGAATCTTATTAATACTATTCTTTGCGTTTTCTTTAATTAAAGCTAAATTTGCT CCCTCAAATAAAATTTACAA
Downstream 100 bases:
>100_bases AAAAGAGTTTTCAGTCTCCGTTTTGAGTTTTCAGTTTTGAAAATTAAACTTAAAAAAAGCCTCAAATTCAAATGAATTTG AGGCTTTTTTGATTGTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKKIQMRPKLIAFGALIIGFFMLSWGNVGHERINKAAVMALPKQLQIFFYNHIDFITQEASVPDIRKYALNYKEEGPRHY FDMENFGAADTYPQTLEEAKQKYDAKFLSDNGILPWYIEDMMAKLTKAFKEKNRAEILFLAADLGHYVGDAHMPLHTSAN HDGQLTDQKGIHSLWESRLPELFVKNYKLNVPEAQYYTDVHKAIWDMINDTHSFAQPLLDIDKSLRTATPQDKVFKLDAE GKVLKSKYNTAVFSDEYAKKLHEQLNGMVETQMRKAITATASFWYTAWVNAGKPDLSDLDAPAVTQRNYQSLQDDLILYK KGDLFGMKNQND
Sequences:
>Translated_332_residues MKKIQMRPKLIAFGALIIGFFMLSWGNVGHERINKAAVMALPKQLQIFFYNHIDFITQEASVPDIRKYALNYKEEGPRHY FDMENFGAADTYPQTLEEAKQKYDAKFLSDNGILPWYIEDMMAKLTKAFKEKNRAEILFLAADLGHYVGDAHMPLHTSAN HDGQLTDQKGIHSLWESRLPELFVKNYKLNVPEAQYYTDVHKAIWDMINDTHSFAQPLLDIDKSLRTATPQDKVFKLDAE GKVLKSKYNTAVFSDEYAKKLHEQLNGMVETQMRKAITATASFWYTAWVNAGKPDLSDLDAPAVTQRNYQSLQDDLILYK KGDLFGMKNQND >Mature_332_residues MKKIQMRPKLIAFGALIIGFFMLSWGNVGHERINKAAVMALPKQLQIFFYNHIDFITQEASVPDIRKYALNYKEEGPRHY FDMENFGAADTYPQTLEEAKQKYDAKFLSDNGILPWYIEDMMAKLTKAFKEKNRAEILFLAADLGHYVGDAHMPLHTSAN HDGQLTDQKGIHSLWESRLPELFVKNYKLNVPEAQYYTDVHKAIWDMINDTHSFAQPLLDIDKSLRTATPQDKVFKLDAE GKVLKSKYNTAVFSDEYAKKLHEQLNGMVETQMRKAITATASFWYTAWVNAGKPDLSDLDAPAVTQRNYQSLQDDLILYK KGDLFGMKNQND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38162; Mature: 38162
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIQMRPKLIAFGALIIGFFMLSWGNVGHERINKAAVMALPKQLQIFFYNHIDFITQEA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVPDIRKYALNYKEEGPRHYFDMENFGAADTYPQTLEEAKQKYDAKFLSDNGILPWYIED CCCHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCHHHHHH MMAKLTKAFKEKNRAEILFLAADLGHYVGDAHMPLHTSANHDGQLTDQKGIHSLWESRLP HHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ELFVKNYKLNVPEAQYYTDVHKAIWDMINDTHSFAQPLLDIDKSLRTATPQDKVFKLDAE HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC GKVLKSKYNTAVFSDEYAKKLHEQLNGMVETQMRKAITATASFWYTAWVNAGKPDLSDLD CHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC APAVTQRNYQSLQDDLILYKKGDLFGMKNQND CCHHHHHHHHHHHHCEEEEECCCEECCCCCCC >Mature Secondary Structure MKKIQMRPKLIAFGALIIGFFMLSWGNVGHERINKAAVMALPKQLQIFFYNHIDFITQEA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVPDIRKYALNYKEEGPRHYFDMENFGAADTYPQTLEEAKQKYDAKFLSDNGILPWYIED CCCHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCHHHHHH MMAKLTKAFKEKNRAEILFLAADLGHYVGDAHMPLHTSANHDGQLTDQKGIHSLWESRLP HHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ELFVKNYKLNVPEAQYYTDVHKAIWDMINDTHSFAQPLLDIDKSLRTATPQDKVFKLDAE HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC GKVLKSKYNTAVFSDEYAKKLHEQLNGMVETQMRKAITATASFWYTAWVNAGKPDLSDLD CHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC APAVTQRNYQSLQDDLILYKKGDLFGMKNQND CCHHHHHHHHHHHHCEEEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA