Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300592

Identifier: 146300592

GI number: 146300592

Start: 3374954

End: 3375529

Strand: Reverse

Name: 146300592

Synonym: Fjoh_2842

Alternate gene names: NA

Gene position: 3375529-3374954 (Counterclockwise)

Preceding gene: 146300593

Following gene: 146300591

Centisome position: 55.36

GC content: 34.03

Gene sequence:

>576_bases
ATGTTCAGCCAATTCCGAAATAAATTCCCTTTAACCGATGAGAAATGGAACGAATACACCGGTTATTTCAATCGTATTGA
AGTTCCGGCCAAAACCGTTTTGATTGAAGAAGGAGAAGTTTCTAAAAAGCTTTTTATAATCGAAAAAGGCTGTATCAGGG
TTTGGTTTAATAATAATGGAAAAGATTTAACTTCACAGTTCTTTTTCGAAAATCAGAGCGTTGCTTCTATTGAAAGTTTT
ATTAAAAAATTCCCAAGTCCGGTTGTGGTTGAAACCATCGAGCCTTCTGTTTTGTGGTGGATTCATAAAAAAGATGTCGA
TACAATTTTGGAAGAAATAAAAGAAATCCCCGAACTTCGGGATCGTTTAATCAATATGCTTTTTCAAAGAACATTTGATT
ATATGAAACACTTTTTTTCTTTCATAAAAGACTCCCCTGCTCAGCGTTATCTTAGTTTAATTGAAGAAAAACCTCAAATA
ATCCAGCGTGTTCCGCAGCATTATATTGCTTCTTATCTTGGCGTTAGCACCGTTCATTTAAGCCGAATTAAAAGTAAATT
GGCACACAAAAAATAA

Upstream 100 bases:

>100_bases
ATTACAAAATAGAAATGTGGAAGGATGTTTTTTCAGATAGACACGTTTTAAAAAGATTTGAAAACTAAAAAATAGTTTTA
ATAGTCCCTTAGTAAAAATT

Downstream 100 bases:

>100_bases
CCTTTTTGAATTTGATAACAAATGTTATCGCCTGCCCGTAAACAGCCCTGTAATTTTGCTTCATAAAATTTAATAATCTT
AAAATTATGAAAGCAGCAGT

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: Catabolite Gene Activator Protein; Regulatory Protein

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MFSQFRNKFPLTDEKWNEYTGYFNRIEVPAKTVLIEEGEVSKKLFIIEKGCIRVWFNNNGKDLTSQFFFENQSVASIESF
IKKFPSPVVVETIEPSVLWWIHKKDVDTILEEIKEIPELRDRLINMLFQRTFDYMKHFFSFIKDSPAQRYLSLIEEKPQI
IQRVPQHYIASYLGVSTVHLSRIKSKLAHKK

Sequences:

>Translated_191_residues
MFSQFRNKFPLTDEKWNEYTGYFNRIEVPAKTVLIEEGEVSKKLFIIEKGCIRVWFNNNGKDLTSQFFFENQSVASIESF
IKKFPSPVVVETIEPSVLWWIHKKDVDTILEEIKEIPELRDRLINMLFQRTFDYMKHFFSFIKDSPAQRYLSLIEEKPQI
IQRVPQHYIASYLGVSTVHLSRIKSKLAHKK
>Mature_191_residues
MFSQFRNKFPLTDEKWNEYTGYFNRIEVPAKTVLIEEGEVSKKLFIIEKGCIRVWFNNNGKDLTSQFFFENQSVASIESF
IKKFPSPVVVETIEPSVLWWIHKKDVDTILEEIKEIPELRDRLINMLFQRTFDYMKHFFSFIKDSPAQRYLSLIEEKPQI
IQRVPQHYIASYLGVSTVHLSRIKSKLAHKK

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22712; Mature: 22712

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSQFRNKFPLTDEKWNEYTGYFNRIEVPAKTVLIEEGEVSKKLFIIEKGCIRVWFNNNG
CCCCCCCCCCCCCCCHHHHHCHHHHCCCCHHHEEEECCCCCCEEEEEECCEEEEEECCCC
KDLTSQFFFENQSVASIESFIKKFPSPVVVETIEPSVLWWIHKKDVDTILEEIKEIPELR
HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHH
DRLINMLFQRTFDYMKHFFSFIKDSPAQRYLSLIEEKPQIIQRVPQHYIASYLGVSTVHL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
SRIKSKLAHKK
HHHHHHHCCCC
>Mature Secondary Structure
MFSQFRNKFPLTDEKWNEYTGYFNRIEVPAKTVLIEEGEVSKKLFIIEKGCIRVWFNNNG
CCCCCCCCCCCCCCCHHHHHCHHHHCCCCHHHEEEECCCCCCEEEEEECCEEEEEECCCC
KDLTSQFFFENQSVASIESFIKKFPSPVVVETIEPSVLWWIHKKDVDTILEEIKEIPELR
HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHH
DRLINMLFQRTFDYMKHFFSFIKDSPAQRYLSLIEEKPQIIQRVPQHYIASYLGVSTVHL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
SRIKSKLAHKK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA