| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300593
Identifier: 146300593
GI number: 146300593
Start: 3375562
End: 3376023
Strand: Reverse
Name: 146300593
Synonym: Fjoh_2843
Alternate gene names: NA
Gene position: 3376023-3375562 (Counterclockwise)
Preceding gene: 146300594
Following gene: 146300592
Centisome position: 55.37
GC content: 27.06
Gene sequence:
>462_bases ATGATATTCAATCTTAATTTTACAACAGATTATGGGCAATTTTATCTAAATGATAAAGACGAAGGAGATACTGGTAGTGA AAATTTTTGGTCAGATCAAGCTCTTAATGATAAACTGGCTGTGGAAAAAGGAATTTTAGGAGTTTCTATTGAGAATACTG AAGGAATGGTTAAATGTGAACTTGAGATTTTAAATTCTAAAAGTCTTATTTCTGATTTTAGTAGTTTTGACCATGTAGTA GAAGCAAGTTTAGAAATAAAAACAGGCATTTTACAAGTTAATGATTGTCCATTTTCTATTATAGTTTTAGAAGAAAAAAT TGAAATTGGAAACTATAGGGTTCGAGTTTATTTCAATAATCTAAAATCTGCATATTTTGAAAATCCAAAAGATTATTACA AAATAGAAATGTGGAAGGATGTTTTTTCAGATAGACACGTTTTAAAAAGATTTGAAAACTAA
Upstream 100 bases:
>100_bases CAAGTTTAAACAAACGAATGATGAATTTGTTGATTGACAGACTGAAAAGTCAGGTGCAGTTGTTTGAGGTGGAATCTGAT TCTAAATAAAATATACTAAA
Downstream 100 bases:
>100_bases AAAATAGTTTTAATAGTCCCTTAGTAAAAATTATGTTCAGCCAATTCCGAAATAAATTCCCTTTAACCGATGAGAAATGG AACGAATACACCGGTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIFNLNFTTDYGQFYLNDKDEGDTGSENFWSDQALNDKLAVEKGILGVSIENTEGMVKCELEILNSKSLISDFSSFDHVV EASLEIKTGILQVNDCPFSIIVLEEKIEIGNYRVRVYFNNLKSAYFENPKDYYKIEMWKDVFSDRHVLKRFEN
Sequences:
>Translated_153_residues MIFNLNFTTDYGQFYLNDKDEGDTGSENFWSDQALNDKLAVEKGILGVSIENTEGMVKCELEILNSKSLISDFSSFDHVV EASLEIKTGILQVNDCPFSIIVLEEKIEIGNYRVRVYFNNLKSAYFENPKDYYKIEMWKDVFSDRHVLKRFEN >Mature_153_residues MIFNLNFTTDYGQFYLNDKDEGDTGSENFWSDQALNDKLAVEKGILGVSIENTEGMVKCELEILNSKSLISDFSSFDHVV EASLEIKTGILQVNDCPFSIIVLEEKIEIGNYRVRVYFNNLKSAYFENPKDYYKIEMWKDVFSDRHVLKRFEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17779; Mature: 17779
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNLNFTTDYGQFYLNDKDEGDTGSENFWSDQALNDKLAVEKGILGVSIENTEGMVKCE CEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEECCCCEEEEE LEILNSKSLISDFSSFDHVVEASLEIKTGILQVNDCPFSIIVLEEKIEIGNYRVRVYFNN EEEECCHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEC LKSAYFENPKDYYKIEMWKDVFSDRHVLKRFEN CCHHHCCCCCHHEEEHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MIFNLNFTTDYGQFYLNDKDEGDTGSENFWSDQALNDKLAVEKGILGVSIENTEGMVKCE CEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEECCCCEEEEE LEILNSKSLISDFSSFDHVVEASLEIKTGILQVNDCPFSIIVLEEKIEIGNYRVRVYFNN EEEECCHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEC LKSAYFENPKDYYKIEMWKDVFSDRHVLKRFEN CCHHHCCCCCHHEEEHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA