| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is cbh [H]
Identifier: 146300581
GI number: 146300581
Start: 3364541
End: 3365593
Strand: Reverse
Name: cbh [H]
Synonym: Fjoh_2831
Alternate gene names: 146300581
Gene position: 3365593-3364541 (Counterclockwise)
Preceding gene: 146300582
Following gene: 146300579
Centisome position: 55.2
GC content: 36.66
Gene sequence:
>1053_bases ATGAAATTAAAAAAGAGATTATCAGCAATTGCAGCTTTATTGAGTATTCTGTTTATGCAGGAAGCTTTTCCTTGTACTAG AATAGTTTACGAAGGTTTAAACGGCACTATTATAACTGCCCGTTCTATGGACTGGAAAGGCGAAATTCCAGCTAATTTAT GGCTTTTTCCAAGAGGAATAGAACGATTTGGCGAAGCAGGAAACAATTCGGTTACATGGAAATCAAAATACGGAAGTGTT GTAACTAGTTCTTGGGATATTGCTTCTTCTGACGGAATGAATGAAAAAGGTCTTGCCGGTAATCTTTTATGGCTGGTAGA ATCTGCATATCCTAAATTTGTAAAAAACGGCCCTGTAAAAGGACTTGCTGTTTCTTTATGGCTGCAGTACGTTTTGGATA ATTATTCAACCGTTGCCGAAGCCGTAAGCGCTTTAGAGAAAAAAGATTTTGTTGTGGCATCGTCACATATTCCGGGAACA GATATTTTTGCAACCGTGCATTTGTCTTTATCAGATTCAACTGGAGATAATGCTATTTTTGAATATATTAATGGAAATCT GGTTATTCATCATGATCGAAAATATGTTGCCATGACTAACTCCCCTATTTTTGATCACCAATTGGCAATTAATACCTATT GGCAGAGTATTCCGGGAACAATTATGCTGCCGGGAACAAATCGTGCGGCAGATCGTTTTGTAAGGGCTTCCTATTATATT GATGCAATCCCCAAAACAGATAATACAAGAACTGCCCTTGCCAGTGTTTTTGGTGTAATTAGAAATTGCTCTGTTCCGCT TGGAATTTCCTCAGAAACAGAACCTAATATTTCTTCTACAAGATGGAGAACTGTCGCAGATCATAAAAATCTGGTTTATT ATTTTGATAATGTACTAAACCCCAATGTAGTTTGGGTTGAGTTTAGTAAACTGGATTTTACTGAAAAAGGAAAAGTAAAA AAACTCAGCTTGGCGAATAACGAAAATTATTCTGGAGAATCGTCTATGAATTTTAAACCTACAGCAACATTCAAATTCGC CGGACTAGATTAA
Upstream 100 bases:
>100_bases AATTAAAATTACTGATATACTGTAAGTTATTACTTCTAAAATTATTAAATTAGCTGTGCTTAAGGCAAACAATCAAATTT TAAATTTTAATACCACCATT
Downstream 100 bases:
>100_bases ACGTTAACCATAAAATTATAAACCCCTCTAAAGTCTTATTTTAGAGGGGTTTTATTTATTCTCTTAATATCTTTTCCATT TTTCTGCCTTTTGCCAATTC
Product: choloylglycine hydrolase
Products: NA
Alternate protein names: Bile salt hydrolase; Conjugated bile acid hydrolase; CBAH [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKLKKRLSAIAALLSILFMQEAFPCTRIVYEGLNGTIITARSMDWKGEIPANLWLFPRGIERFGEAGNNSVTWKSKYGSV VTSSWDIASSDGMNEKGLAGNLLWLVESAYPKFVKNGPVKGLAVSLWLQYVLDNYSTVAEAVSALEKKDFVVASSHIPGT DIFATVHLSLSDSTGDNAIFEYINGNLVIHHDRKYVAMTNSPIFDHQLAINTYWQSIPGTIMLPGTNRAADRFVRASYYI DAIPKTDNTRTALASVFGVIRNCSVPLGISSETEPNISSTRWRTVADHKNLVYYFDNVLNPNVVWVEFSKLDFTEKGKVK KLSLANNENYSGESSMNFKPTATFKFAGLD
Sequences:
>Translated_350_residues MKLKKRLSAIAALLSILFMQEAFPCTRIVYEGLNGTIITARSMDWKGEIPANLWLFPRGIERFGEAGNNSVTWKSKYGSV VTSSWDIASSDGMNEKGLAGNLLWLVESAYPKFVKNGPVKGLAVSLWLQYVLDNYSTVAEAVSALEKKDFVVASSHIPGT DIFATVHLSLSDSTGDNAIFEYINGNLVIHHDRKYVAMTNSPIFDHQLAINTYWQSIPGTIMLPGTNRAADRFVRASYYI DAIPKTDNTRTALASVFGVIRNCSVPLGISSETEPNISSTRWRTVADHKNLVYYFDNVLNPNVVWVEFSKLDFTEKGKVK KLSLANNENYSGESSMNFKPTATFKFAGLD >Mature_350_residues MKLKKRLSAIAALLSILFMQEAFPCTRIVYEGLNGTIITARSMDWKGEIPANLWLFPRGIERFGEAGNNSVTWKSKYGSV VTSSWDIASSDGMNEKGLAGNLLWLVESAYPKFVKNGPVKGLAVSLWLQYVLDNYSTVAEAVSALEKKDFVVASSHIPGT DIFATVHLSLSDSTGDNAIFEYINGNLVIHHDRKYVAMTNSPIFDHQLAINTYWQSIPGTIMLPGTNRAADRFVRASYYI DAIPKTDNTRTALASVFGVIRNCSVPLGISSETEPNISSTRWRTVADHKNLVYYFDNVLNPNVVWVEFSKLDFTEKGKVK KLSLANNENYSGESSMNFKPTATFKFAGLD
Specific function: The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.24 [H]
Molecular weight: Translated: 38838; Mature: 38838
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKKRLSAIAALLSILFMQEAFPCTRIVYEGLNGTIITARSMDWKGEIPANLWLFPRGI CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECHHH ERFGEAGNNSVTWKSKYGSVVTSSWDIASSDGMNEKGLAGNLLWLVESAYPKFVKNGPVK HHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHCCCCC GLAVSLWLQYVLDNYSTVAEAVSALEKKDFVVASSHIPGTDIFATVHLSLSDSTGDNAIF HHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEECCCCCCCCEE EYINGNLVIHHDRKYVAMTNSPIFDHQLAINTYWQSIPGTIMLPGTNRAADRFVRASYYI EEECCCEEEEECCEEEEEECCCCCCCEEEHHHHHHCCCCEEEECCCCHHHHHHHEEEEEE DAIPKTDNTRTALASVFGVIRNCSVPLGISSETEPNISSTRWRTVADHKNLVYYFDNVLN EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCC PNVVWVEFSKLDFTEKGKVKKLSLANNENYSGESSMNFKPTATFKFAGLD CCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MKLKKRLSAIAALLSILFMQEAFPCTRIVYEGLNGTIITARSMDWKGEIPANLWLFPRGI CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECHHH ERFGEAGNNSVTWKSKYGSVVTSSWDIASSDGMNEKGLAGNLLWLVESAYPKFVKNGPVK HHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHCCCCC GLAVSLWLQYVLDNYSTVAEAVSALEKKDFVVASSHIPGTDIFATVHLSLSDSTGDNAIF HHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEECCCCCCCCEE EYINGNLVIHHDRKYVAMTNSPIFDHQLAINTYWQSIPGTIMLPGTNRAADRFVRASYYI EEECCCEEEEECCEEEEEECCCCCCCEEEHHHHHHCCCCEEEECCCCHHHHHHHEEEEEE DAIPKTDNTRTALASVFGVIRNCSVPLGISSETEPNISSTRWRTVADHKNLVYYFDNVLN EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCC PNVVWVEFSKLDFTEKGKVKKLSLANNENYSGESSMNFKPTATFKFAGLD CCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7618863; 11792842 [H]