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The map label for this gene is 146300574

Identifier: 146300574

GI number: 146300574

Start: 3359647

End: 3360402

Strand: Reverse

Name: 146300574

Synonym: Fjoh_2824

Alternate gene names: NA

Gene position: 3360402-3359647 (Counterclockwise)

Preceding gene: 146300575

Following gene: 146300573

Centisome position: 55.12

GC content: 32.8

Gene sequence:

>756_bases
ATGAGTTTATTAATTCAATCCGCTTTACCAGATTCATCTATTTCGCATTTTGTACACAGCTTTTGGATGCTTGAAAACAA
TACCGGAAAAGATATTCCGTCGACGATACTGCCAAACGGAATGGTTGATCTTGCTTTAATGAATATGGGTTCTCAGAACT
GGGAAATATCAATTCGCGGTTTAGATACTGTACCAAGTGCAATAAATATTCCTGTTGCAACAAAAATGTTCTCTATTGGA
TTTAAGCTTCTGGCTGTAGAATATTTGCTTGGAGATTCTATTAAAGACGTTTTAAACGGTGGAAAAAACCTTTCAGATGA
AATATGGCAGTTTGAAGAGACTGATTTGAATACTTTTGAAAATTTTTGCAGCAAAGCCACACAAATAATTAAAGGAATTT
TTATTGAAAATATCGACAATAGAAAAACCAAACTGTTTGATTTAATTTATTCTTCAAAAGGTTCTTTGTCTGTTCAGGAA
CTTTCTGATAATGTGTTTTGGAGCAGTCGTCAAATTAACCGTTACTTTAATCAGCAATTTGGAATTTCGCTTAAGGCTTA
TTGCAATATTCTTCGTTTTGGATCGTCATTTAAACCCATCAGCGAAGGGAATCTTTTTCCTGATCAAAACTTTACAGATC
AGAATCATTTTATAAAAGAAATCAAGAAATATTCAGGCGTAACTCCAAAAGAACTCAGCAAAAATGTAGAAGATCGCTTT
ATGGATATTACAGCGATTAAAAAGTTCAACAAATAA

Upstream 100 bases:

>100_bases
GCCATTTTTCAAGGGTTTTTGAACAGCATATTGGTTTAAAACCGAAAAAATATTCCAGCTTATAACCTAAGTGATTAATT
TTGTATAAGATATTTAGAAA

Downstream 100 bases:

>100_bases
AAACGTCTGATTTTTACTATTTCATCCACTCCTTATTTTTCAATTTTGTAGCATAATTCAAAGAATAAAACTTATGCTAC
TTACAAATAAAAAAACAGCC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Helix-Turn-Helix- Domain Containing Protein AraC Type; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family; Helix-Turn-Helix AraC Domain Protein; Transcriptional Regulator

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSLLIQSALPDSSISHFVHSFWMLENNTGKDIPSTILPNGMVDLALMNMGSQNWEISIRGLDTVPSAINIPVATKMFSIG
FKLLAVEYLLGDSIKDVLNGGKNLSDEIWQFEETDLNTFENFCSKATQIIKGIFIENIDNRKTKLFDLIYSSKGSLSVQE
LSDNVFWSSRQINRYFNQQFGISLKAYCNILRFGSSFKPISEGNLFPDQNFTDQNHFIKEIKKYSGVTPKELSKNVEDRF
MDITAIKKFNK

Sequences:

>Translated_251_residues
MSLLIQSALPDSSISHFVHSFWMLENNTGKDIPSTILPNGMVDLALMNMGSQNWEISIRGLDTVPSAINIPVATKMFSIG
FKLLAVEYLLGDSIKDVLNGGKNLSDEIWQFEETDLNTFENFCSKATQIIKGIFIENIDNRKTKLFDLIYSSKGSLSVQE
LSDNVFWSSRQINRYFNQQFGISLKAYCNILRFGSSFKPISEGNLFPDQNFTDQNHFIKEIKKYSGVTPKELSKNVEDRF
MDITAIKKFNK
>Mature_250_residues
SLLIQSALPDSSISHFVHSFWMLENNTGKDIPSTILPNGMVDLALMNMGSQNWEISIRGLDTVPSAINIPVATKMFSIGF
KLLAVEYLLGDSIKDVLNGGKNLSDEIWQFEETDLNTFENFCSKATQIIKGIFIENIDNRKTKLFDLIYSSKGSLSVQEL
SDNVFWSSRQINRYFNQQFGISLKAYCNILRFGSSFKPISEGNLFPDQNFTDQNHFIKEIKKYSGVTPKELSKNVEDRFM
DITAIKKFNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28525; Mature: 28394

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLIQSALPDSSISHFVHSFWMLENNTGKDIPSTILPNGMVDLALMNMGSQNWEISIRG
CCCEECCCCCCHHHHHHHHHHHHEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCEEEEEE
LDTVPSAINIPVATKMFSIGFKLLAVEYLLGDSIKDVLNGGKNLSDEIWQFEETDLNTFE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCCHHHHH
NFCSKATQIIKGIFIENIDNRKTKLFDLIYSSKGSLSVQELSDNVFWSSRQINRYFNQQF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHCCCHHCCHHHHHHHHHHHH
GISLKAYCNILRFGSSFKPISEGNLFPDQNFTDQNHFIKEIKKYSGVTPKELSKNVEDRF
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHH
MDITAIKKFNK
HHHHHHHHCCC
>Mature Secondary Structure 
SLLIQSALPDSSISHFVHSFWMLENNTGKDIPSTILPNGMVDLALMNMGSQNWEISIRG
CCEECCCCCCHHHHHHHHHHHHEECCCCCCCCHHHCCCCHHHHHHHHCCCCCCEEEEEE
LDTVPSAINIPVATKMFSIGFKLLAVEYLLGDSIKDVLNGGKNLSDEIWQFEETDLNTFE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCCHHHHH
NFCSKATQIIKGIFIENIDNRKTKLFDLIYSSKGSLSVQELSDNVFWSSRQINRYFNQQF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHCCCHHCCHHHHHHHHHHHH
GISLKAYCNILRFGSSFKPISEGNLFPDQNFTDQNHFIKEIKKYSGVTPKELSKNVEDRF
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHH
MDITAIKKFNK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA