| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is tetX [H]
Identifier: 146300573
GI number: 146300573
Start: 3358458
End: 3359573
Strand: Reverse
Name: tetX [H]
Synonym: Fjoh_2823
Alternate gene names: 146300573
Gene position: 3359573-3358458 (Counterclockwise)
Preceding gene: 146300574
Following gene: 146300572
Centisome position: 55.1
GC content: 35.84
Gene sequence:
>1116_bases ATGCTACTTACAAATAAAAAAACAGCCATTATAGGCGCCGGGCCGGTTGGTTTAACAATGGCCAGATTATTACAGCAAAA CGGAATTAATGTTACCGTTTACGAAAGAGACAAAGACCCAAAAGCAAGAATCTGGGGCGGTACGCTGGATTTACACAAAG GTTCTGGGCAAGATGCGATGCAAAAGGCGGGACTGCTTGAGGAATACTACAAAAAGGCAATTCCGATGGGGAGAATCATA ACCGATTATCTTGGAAATGTATTGTTTAGCAAAGAAACATCGGTCGAAGAACAATATGACGGCCCGGAAATCAACCGAAA CGACTTAAGAACATTACTAATCAACAGCTTAGAAAAAGATACTGTGATTTGGGATAGAAAACTGATTAAGGCCGAAGAAC AAAACAATAAATGGGTTTTACATTTTGAAAATGGCGAAATTGAAACCGCAGATTTTGTTATTGGAGCAAATGGCGGCATG ACTGCTATTAGAAAATATCTTACTGATGCAGCAGTAGAATTTACAGGAACTTATATGATACAAGGCGAAGTATCTGAACC AGAGATAAAATGCCCTGATTTTTACAAACTATGTGCTGATAAAATTTTAATGACTTCTAATAATGGGAATTTATTAGTTG CAAACCCTAAGAACAGTAATGTTTTGAGTTATAATGTGATTTTTAAAATGCCAGAAATACTTGAATTGGACTTTAAAAAT TCTGACTCTGTAATTGAGTTTATTTCAGAAAGATTTAAGGATTGGGACGCTGTTTACAAACAATTATTTCAAGCTGCTTC ATTTTTTACTGGTTTGCCCACAAAAAAAATATCAGTCGAGGAATGGAAAAATAATCGTCCCTTACCTATTACGCTTATTG GCGATGCAGCGCATTTAATGCCTCCTTTTGCGGGACAAGGAGCTAATATCGGGCTTCTGGATGCTTTAATTCTATCAGAA AACTTAACAAACAGAGATTTTAAAACCATAGAAGAAGCAGTTTTTGATTATGAACAGCAAATGCAGCTTTATGCACGCAA AGCACAAGAAGAAACCCGAATAAATGAAATTAAAATGCTGAAAAGGGATTTTACATTTTTAAAATTTGCCAATTAA
Upstream 100 bases:
>100_bases ACAGCGATTAAAAAGTTCAACAAATAAAAACGTCTGATTTTTACTATTTCATCCACTCCTTATTTTTCAATTTTGTAGCA TAATTCAAAGAATAAAACTT
Downstream 100 bases:
>100_bases ATATTTGGTATTTGTGATGAAAATAATTCTATCTTAGTAACAGAAAACGAACCTGATAATTTGATCTAAAATATGGAAAA CTCACAAAATCAATCTGATG
Product: FAD-binding monooxygenase
Products: H2O; 3-(2,3-dihydroxyphenyl)propionate; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MLLTNKKTAIIGAGPVGLTMARLLQQNGINVTVYERDKDPKARIWGGTLDLHKGSGQDAMQKAGLLEEYYKKAIPMGRII TDYLGNVLFSKETSVEEQYDGPEINRNDLRTLLINSLEKDTVIWDRKLIKAEEQNNKWVLHFENGEIETADFVIGANGGM TAIRKYLTDAAVEFTGTYMIQGEVSEPEIKCPDFYKLCADKILMTSNNGNLLVANPKNSNVLSYNVIFKMPEILELDFKN SDSVIEFISERFKDWDAVYKQLFQAASFFTGLPTKKISVEEWKNNRPLPITLIGDAAHLMPPFAGQGANIGLLDALILSE NLTNRDFKTIEEAVFDYEQQMQLYARKAQEETRINEIKMLKRDFTFLKFAN
Sequences:
>Translated_371_residues MLLTNKKTAIIGAGPVGLTMARLLQQNGINVTVYERDKDPKARIWGGTLDLHKGSGQDAMQKAGLLEEYYKKAIPMGRII TDYLGNVLFSKETSVEEQYDGPEINRNDLRTLLINSLEKDTVIWDRKLIKAEEQNNKWVLHFENGEIETADFVIGANGGM TAIRKYLTDAAVEFTGTYMIQGEVSEPEIKCPDFYKLCADKILMTSNNGNLLVANPKNSNVLSYNVIFKMPEILELDFKN SDSVIEFISERFKDWDAVYKQLFQAASFFTGLPTKKISVEEWKNNRPLPITLIGDAAHLMPPFAGQGANIGLLDALILSE NLTNRDFKTIEEAVFDYEQQMQLYARKAQEETRINEIKMLKRDFTFLKFAN >Mature_371_residues MLLTNKKTAIIGAGPVGLTMARLLQQNGINVTVYERDKDPKARIWGGTLDLHKGSGQDAMQKAGLLEEYYKKAIPMGRII TDYLGNVLFSKETSVEEQYDGPEINRNDLRTLLINSLEKDTVIWDRKLIKAEEQNNKWVLHFENGEIETADFVIGANGGM TAIRKYLTDAAVEFTGTYMIQGEVSEPEIKCPDFYKLCADKILMTSNNGNLLVANPKNSNVLSYNVIFKMPEILELDFKN SDSVIEFISERFKDWDAVYKQLFQAASFFTGLPTKKISVEEWKNNRPLPITLIGDAAHLMPPFAGQGANIGLLDALILSE NLTNRDFKTIEEAVFDYEQQMQLYARKAQEETRINEIKMLKRDFTFLKFAN
Specific function: Resistance to tetracycline via an oxidoreductase activity (Potential) [H]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI187960045, Length=330, Percent_Identity=24.2424242424242, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17562934, Length=385, Percent_Identity=25.7142857142857, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI28573964, Length=334, Percent_Identity=26.0479041916168, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR016040 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: 1.14.13.- [C]
Molecular weight: Translated: 42077; Mature: 42077
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTNKKTAIIGAGPVGLTMARLLQQNGINVTVYERDKDPKARIWGGTLDLHKGSGQDAM CCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCEEEEECCCCHHHH QKAGLLEEYYKKAIPMGRIITDYLGNVLFSKETSVEEQYDGPEINRNDLRTLLINSLEKD HHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCHHHCCCCCCCHHHHHHHHHHHCCCC TVIWDRKLIKAEEQNNKWVLHFENGEIETADFVIGANGGMTAIRKYLTDAAVEFTGTYMI HHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHEEEEEEEE QGEVSEPEIKCPDFYKLCADKILMTSNNGNLLVANPKNSNVLSYNVIFKMPEILELDFKN EECCCCCCCCCCHHHHHHHCCEEEECCCCCEEEECCCCCCEEEEEEEECCCHHEEECCCC SDSVIEFISERFKDWDAVYKQLFQAASFFTGLPTKKISVEEWKNNRPLPITLIGDAAHLM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCEEEEEECCHHHHC PPFAGQGANIGLLDALILSENLTNRDFKTIEEAVFDYEQQMQLYARKAQEETRINEIKML CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRDFTFLKFAN HHCCCEEEECC >Mature Secondary Structure MLLTNKKTAIIGAGPVGLTMARLLQQNGINVTVYERDKDPKARIWGGTLDLHKGSGQDAM CCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCEEEEECCCCHHHH QKAGLLEEYYKKAIPMGRIITDYLGNVLFSKETSVEEQYDGPEINRNDLRTLLINSLEKD HHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCHHHCCCCCCCHHHHHHHHHHHCCCC TVIWDRKLIKAEEQNNKWVLHFENGEIETADFVIGANGGMTAIRKYLTDAAVEFTGTYMI HHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHEEEEEEEE QGEVSEPEIKCPDFYKLCADKILMTSNNGNLLVANPKNSNVLSYNVIFKMPEILELDFKN EECCCCCCCCCCHHHHHHHCCEEEECCCCCEEEECCCCCCEEEEEEEECCCHHEEECCCC SDSVIEFISERFKDWDAVYKQLFQAASFFTGLPTKKISVEEWKNNRPLPITLIGDAAHLM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCEEEEEECCHHHHC PPFAGQGANIGLLDALILSENLTNRDFKTIEEAVFDYEQQMQLYARKAQEETRINEIKML CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRDFTFLKFAN HHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-(3-hydroxyphenyl)propionate; NADH; O2 [C]
Specific reaction: 3-(3-hydroxyphenyl)propionate + NADH + O2 = H2O + 3-(2,3-dihydroxyphenyl)propionate + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1846135 [H]