| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300223
Identifier: 146300223
GI number: 146300223
Start: 2955386
End: 2956063
Strand: Direct
Name: 146300223
Synonym: Fjoh_2468
Alternate gene names: NA
Gene position: 2955386-2956063 (Clockwise)
Preceding gene: 146300222
Following gene: 146300224
Centisome position: 48.47
GC content: 33.78
Gene sequence:
>678_bases ATGCTGAAAAAATCATTTAAAATTCTAGGCTGGACGCTTTTCGGAATTTTCAGTTTTCTTGCTTTGTATGTTACATCTGT TTTAATTATTTCTAAAATTACGGTCAATTCAGATATTGCGAAAGTCGAAGAACAAGATGCCGTTCCAATTTACATTCTTT CAAACGGAGTCCATACTGATATTGTTGTTCCAATAAAAAATGAGATTAAAGACTGGCGAAGTGAAATTCAATTTAATCAA ACACAATCAAAAGATTCTTTAATGAATTATATCGCTTTTGGCTGGGGAGATAAAGGATTTTATCTTGAAACTCCAGAATG GGCAGATTTAAAAGCAAGCACAGCATTTAAAGCTGCGTTTGGAATCAGTTCATCGGCTGTACATGCTACATTTTTTAAGC AGTTGAGAGAAGGCGATGATTGTAAACGTATTTTAGTTTCAAAAGATGATTATCAAAAGTTAGTGAACTATATTTCAAAT AGTTTTAGTGATCCAGTTCATCCCGAATGGATTCAGGGACACAGCTACGGAAAAAAAGATGCTTTTTATGAAGCCAAAGG AAGTTATAGTCTTTTTTATACCTGCAATACTTGGGCAAATAACGCGCTAAAAGCGGCGAACCAAAAAGCCAGCTTATGGA CCGTTTATGATAAAGGGATTTTCTATCATTATAAATAA
Upstream 100 bases:
>100_bases GTCCCATTTTGCAAACAAATTAACTGCTTAAAAATTTTTGGCTCAAAAATTGGTTAGTAAAAAATTAACCAATTACTAAT CTAAAATCAACCAAATTAAA
Downstream 100 bases:
>100_bases TGTATAAATACTGTCCTCATGGGACATTCTTCAGATGTTAGTTTTTTAGTTACCAATGTTGAATCTCTACGAGATTATTT CATAATGTATATTGTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLKKSFKILGWTLFGIFSFLALYVTSVLIISKITVNSDIAKVEEQDAVPIYILSNGVHTDIVVPIKNEIKDWRSEIQFNQ TQSKDSLMNYIAFGWGDKGFYLETPEWADLKASTAFKAAFGISSSAVHATFFKQLREGDDCKRILVSKDDYQKLVNYISN SFSDPVHPEWIQGHSYGKKDAFYEAKGSYSLFYTCNTWANNALKAANQKASLWTVYDKGIFYHYK
Sequences:
>Translated_225_residues MLKKSFKILGWTLFGIFSFLALYVTSVLIISKITVNSDIAKVEEQDAVPIYILSNGVHTDIVVPIKNEIKDWRSEIQFNQ TQSKDSLMNYIAFGWGDKGFYLETPEWADLKASTAFKAAFGISSSAVHATFFKQLREGDDCKRILVSKDDYQKLVNYISN SFSDPVHPEWIQGHSYGKKDAFYEAKGSYSLFYTCNTWANNALKAANQKASLWTVYDKGIFYHYK >Mature_225_residues MLKKSFKILGWTLFGIFSFLALYVTSVLIISKITVNSDIAKVEEQDAVPIYILSNGVHTDIVVPIKNEIKDWRSEIQFNQ TQSKDSLMNYIAFGWGDKGFYLETPEWADLKASTAFKAAFGISSSAVHATFFKQLREGDDCKRILVSKDDYQKLVNYISN SFSDPVHPEWIQGHSYGKKDAFYEAKGSYSLFYTCNTWANNALKAANQKASLWTVYDKGIFYHYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25673; Mature: 25673
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKSFKILGWTLFGIFSFLALYVTSVLIISKITVNSDIAKVEEQDAVPIYILSNGVHTD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCEE IVVPIKNEIKDWRSEIQFNQTQSKDSLMNYIAFGWGDKGFYLETPEWADLKASTAFKAAF EEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH GISSSAVHATFFKQLREGDDCKRILVSKDDYQKLVNYISNSFSDPVHPEWIQGHSYGKKD CCCCCHHHHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCC AFYEAKGSYSLFYTCNTWANNALKAANQKASLWTVYDKGIFYHYK CEEECCCCEEEEEEECCCCCHHHHHCCCCCEEEEEEECCEEEEEC >Mature Secondary Structure MLKKSFKILGWTLFGIFSFLALYVTSVLIISKITVNSDIAKVEEQDAVPIYILSNGVHTD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCEE IVVPIKNEIKDWRSEIQFNQTQSKDSLMNYIAFGWGDKGFYLETPEWADLKASTAFKAAF EEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH GISSSAVHATFFKQLREGDDCKRILVSKDDYQKLVNYISNSFSDPVHPEWIQGHSYGKKD CCCCCHHHHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCC AFYEAKGSYSLFYTCNTWANNALKAANQKASLWTVYDKGIFYHYK CEEECCCCEEEEEEECCCCCHHHHHCCCCCEEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA