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The map label for this gene is rbn [C]

Identifier: 146300224

GI number: 146300224

Start: 2956334

End: 2957251

Strand: Direct

Name: rbn [C]

Synonym: Fjoh_2469

Alternate gene names: 146300224

Gene position: 2956334-2957251 (Clockwise)

Preceding gene: 146300223

Following gene: 146300225

Centisome position: 48.49

GC content: 32.57

Gene sequence:

>918_bases
ATGAAAATCAAAAATATCTTAAAAAAAATATGGTTTCTATTAAAGAATACTTTTTTAGAATTTAATGATGACAACGCTAT
TAAGCTCAGCGCGGCATTATCGTATTATACGATATTTGCACTGCCTCCGCTGTTAATTATTATCATTACTATTTGTGGTT
TCTTTTTTGGAGAAGATGCAGTAACCGGCCAGCTGTATGGTCAAATAAACGGAATGGTAGGAAATAGTGCCGCAATTCAA
ATTCAGGAAGCTATAAAAAATGTGCAATTGTCTGGAGATAATATGTTTGCAACTGTGTTTGGAATCGTGATGCTGTTAAT
TGGAGCATCTGGGGTTTTTGCAGAAATACAAAGTTCTATTAATTTTATTTGGGGATTACGCGCCAAACCAGATAAAGGCA
TTAAGAAATTCATTCAGAATCGATTAATGTCCTTTTCAATGATAGCATCTGTAGGCTTTTTAATGCTGGTGAGTTTACTC
GTAAATACAACATTAGATTTAGTGAGTTCGCGATTAAAAATCTACTTTCCGGAAAGTACCGTTTATTTGTTTTATGTTGT
TAATGTAGTGATTGTACTGGCAAGTATAACACTTCTTTTTACTATAATTTTTAGGACTTTACCAGACGGAAAAATAAGAT
GGAAAGATGCTTTTATAGGATCAGGAGTTACTGCGGTACTATTTATGATCGGGAAGTTTGCGATAGGTTTTTATTTAGGA
AGTTCAACTGTAGCTTCTGTTTATGGAGCGGCGGGATCTGTAATAATTATTTTGGTTTGGGTTTATTATTCGGCAATTAT
TCTGTATTTTGGAGCAGAATTTACTAAAGTATATGCAAAGTCTTACGGCGGTAAAATTTACCCAAATGAATATTCAGTTG
AAATTCAAAAAGAAATTTTTGAAATAGAAAATAATTAA

Upstream 100 bases:

>100_bases
ATATTGGCAGATGGAAAAAATATAAAATTCCATTAAAAAACGAGAATTCAAGATTTTTTATTATTGCGTAAATTTGAGAG
AATATCAAATTAATCAGCAG

Downstream 100 bases:

>100_bases
AGAACCGCAGCAGATTAAAAAAACATTTTAATCCTCTTAATCTGTGGCAAAAAACAAATACCACATATGAAAATAATTGC
CTTTGGAGGAAGTAACAGTA

Product: putative ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKIKNILKKIWFLLKNTFLEFNDDNAIKLSAALSYYTIFALPPLLIIIITICGFFFGEDAVTGQLYGQINGMVGNSAAIQ
IQEAIKNVQLSGDNMFATVFGIVMLLIGASGVFAEIQSSINFIWGLRAKPDKGIKKFIQNRLMSFSMIASVGFLMLVSLL
VNTTLDLVSSRLKIYFPESTVYLFYVVNVVIVLASITLLFTIIFRTLPDGKIRWKDAFIGSGVTAVLFMIGKFAIGFYLG
SSTVASVYGAAGSVIIILVWVYYSAIILYFGAEFTKVYAKSYGGKIYPNEYSVEIQKEIFEIENN

Sequences:

>Translated_305_residues
MKIKNILKKIWFLLKNTFLEFNDDNAIKLSAALSYYTIFALPPLLIIIITICGFFFGEDAVTGQLYGQINGMVGNSAAIQ
IQEAIKNVQLSGDNMFATVFGIVMLLIGASGVFAEIQSSINFIWGLRAKPDKGIKKFIQNRLMSFSMIASVGFLMLVSLL
VNTTLDLVSSRLKIYFPESTVYLFYVVNVVIVLASITLLFTIIFRTLPDGKIRWKDAFIGSGVTAVLFMIGKFAIGFYLG
SSTVASVYGAAGSVIIILVWVYYSAIILYFGAEFTKVYAKSYGGKIYPNEYSVEIQKEIFEIENN
>Mature_305_residues
MKIKNILKKIWFLLKNTFLEFNDDNAIKLSAALSYYTIFALPPLLIIIITICGFFFGEDAVTGQLYGQINGMVGNSAAIQ
IQEAIKNVQLSGDNMFATVFGIVMLLIGASGVFAEIQSSINFIWGLRAKPDKGIKKFIQNRLMSFSMIASVGFLMLVSLL
VNTTLDLVSSRLKIYFPESTVYLFYVVNVVIVLASITLLFTIIFRTLPDGKIRWKDAFIGSGVTAVLFMIGKFAIGFYLG
SSTVASVYGAAGSVIIILVWVYYSAIILYFGAEFTKVYAKSYGGKIYPNEYSVEIQKEIFEIENN

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=286, Percent_Identity=25.8741258741259, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 33855; Mature: 33855

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKNILKKIWFLLKNTFLEFNDDNAIKLSAALSYYTIFALPPLLIIIITICGFFFGEDA
CCHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTGQLYGQINGMVGNSAAIQIQEAIKNVQLSGDNMFATVFGIVMLLIGASGVFAEIQSSI
CCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
NFIWGLRAKPDKGIKKFIQNRLMSFSMIASVGFLMLVSLLVNTTLDLVSSRLKIYFPEST
HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCH
VYLFYVVNVVIVLASITLLFTIIFRTLPDGKIRWKDAFIGSGVTAVLFMIGKFAIGFYLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHC
SSTVASVYGAAGSVIIILVWVYYSAIILYFGAEFTKVYAKSYGGKIYPNEYSVEIQKEIF
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
EIENN
HHCCC
>Mature Secondary Structure
MKIKNILKKIWFLLKNTFLEFNDDNAIKLSAALSYYTIFALPPLLIIIITICGFFFGEDA
CCHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTGQLYGQINGMVGNSAAIQIQEAIKNVQLSGDNMFATVFGIVMLLIGASGVFAEIQSSI
CCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
NFIWGLRAKPDKGIKKFIQNRLMSFSMIASVGFLMLVSLLVNTTLDLVSSRLKIYFPEST
HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCH
VYLFYVVNVVIVLASITLLFTIIFRTLPDGKIRWKDAFIGSGVTAVLFMIGKFAIGFYLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHC
SSTVASVYGAAGSVIIILVWVYYSAIILYFGAEFTKVYAKSYGGKIYPNEYSVEIQKEIF
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
EIENN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA