| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299800
Identifier: 146299800
GI number: 146299800
Start: 2401735
End: 2403984
Strand: Direct
Name: 146299800
Synonym: Fjoh_2041
Alternate gene names: NA
Gene position: 2401735-2403984 (Clockwise)
Preceding gene: 146299799
Following gene: 146299801
Centisome position: 39.39
GC content: 35.38
Gene sequence:
>2250_bases ATGAAACCTATGGTTTTAAATACAAACAAATTTAAAACAGCATGTATTTTATACATGCTGTTTTTTAGCATCATGATTTT TGCGCAGCAACCTGCCGATTTTGTTAATCCAATAATTGGAACTTCCAATTATGGTGCGGCTTTTCCAGGCCCAATCGCTC CGCGCGGTATGGCAAGTATCAGTCCTTTTAATGTGGCTGGAGTAAAAAATACTCCAATGGAAAAAGATAGTCAATGGCTT TCAAATCCGTATGTAAATGAAAATACCTTTTTGACAGGATTTAGTCAAGTGAATTTAAGCGGAGTTGGCTGTCCAGATTT GGGTGTTATTTTATTGATGCCGACAACTGGAAATGTAGAAATCGATCATTTAAAATACGGTTCTACTTATTCTAATGAAG TTGCAAAAGCTGCGTATTACAGCGTAAACATTGACAAATACAACGTTAAAGGTGAATTTACAGCTTCAAAACGAGTTGGG ATTAGCAGATTCACTTTCCCGAAAGGGCAGTCTAATATTTTATTAAATCTTGGTTTAGGATTAACAAACGAAGAAGGAGC AATGGTAAAAGTCGTTTCTTCGACAGAAATTGAAGGAATGCGTTCAGTTGGTTCATTTTGTTACAATAGTCCAGAAGATG CTTACCCAGTTTATTTTGTGGCTCAATTTTCTAAACCTGCAGATAAATTTGGAGTTTGGAAAAAACCTGCAAAATACAAC GGCGTTGAAGCGCAGTGGATGGGTTACAACGGAAAAACGAGAATAATGGAAAATACAATCAAAACCGTTGTGGGGGATAG TATTGGAAGTTATTTTACCTATAAATTCGATAAACAAGAAACGGTTGAAGTGAAGATTGGAATTTCGTACGTAAGTATCG AAAATGCCCGTGAAAACTTAGCAAAAGAAGTTGGTAACAGATCTTTTGATGCAATTTATAAAGAAACCTACAACGAATGG AATGAAGAATTGTCTAAAATTTTGGTTGAAGGTGGTTCAAAAGATGACAATACAATTTTCTACACAGCTTTGTATCACAC TTTAATTCACCCAAATACTTTAAATGATATTAACGGACAATATCCCGTAATCAAAAGAAGTAGAATTGCTAAAACCGATG ACACCCGTTATACCGTATTTTCTTTATGGGATACGTACCGAAATGTACATCCATTGATGTCTTTGGTTTATCCAAAACAG CAATCTGATATGGTAAAAAGTATGTTGACTATGTTTGATGAAAACGGCTGGTTACCCAAATGGGAATTGAACTCAACAGA AACTTTTACTATGGTGGGAGATCCTGCAAGTATTGTAATTACAGATACGTATTTAAAAGGAATTCATGATTTTGATGTTC AGAAAGCGTATTACGCGATGCTGAAAGGAGCAGATCAGGTTGAAAATAATCCGCTTCGTCCGGGATTGAAAGATTATATC AAAAAAGGATATTTGACAACCGATAATAAAGGCCCGGTTTCTACTACTCAGGAATACAATATTTCAGATTATTCTATTTC GCTTATGGCCAACGAATTCGGTGACAAAGACAATGTAAAACGTTTTAAAGAACGTTCATTATCCTACAGAAAATTATTCG ATAAAAACTTAAATCTGCTTCGACCAAGAACTCCTGACGGAAAATGGTACGAGCCATTTGATCCTGCATCTGGAGCCAAT TTTGAAGAAAATGTTGGTTTTATCGAAGGAAATGCCTGGCAGTATGCATTTATGGTTCCTCACGATATTAACGGATTAAA GAAATTAATGGGAGGTGATCAGGCTTTTTCGGCACAATTGCAGAAAATTTTCGACACCAAACAATTTGATATGGCAAACG AACCAGACATTGCCAATCCGTATTTATTCAATTATGTAAAAGGAGAAGAATACAAAGCACAGGAAAATGTAAAAAGATTG GTTCGCGAATATTTCAAAAATGAACCAAAAGGATTACCAGGAAATGACGATACAGGAACAATGTCGGCCTGGTTGGTGTA TTCGATGATGGGAATTTATCCAATATCTCCGGGAGATCCAATTTATACCATTACAACCCCAATGTTTCATAGAGTGACGA TCAAATTAGATCCAAGATATTATAAAAAAGAAAGCATCGTAATTGAAAGACAAGAAAATAATGGTGGGAAAATCAATTCG ATTGAACTAAACGGAAAAACACATAACAGCTTTTTTATTTCGCACGATGATTTTGTGAATGGAACAAAGCTTAAAGTGAT TCAAAATTAA
Upstream 100 bases:
>100_bases AAGGAAACGGATTTAAAGTAATTATTCCAGAAAGCTTAAGAAATAATCTTCCTGCAAAAGAAGCGTGGACTTTAAAAATA GAAGCGATCAACAGATAAAA
Downstream 100 bases:
>100_bases AACAACACAATTATGTTACAACTAAAAATCAAAAAAACAGCCATTATTTTTGTAATGGCTGTAGGTTTTTTTAACCAAAC CTATGCGCAGAAAAAATACC
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Glycoside Hydrolase Family Protein; Secreted Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MKPMVLNTNKFKTACILYMLFFSIMIFAQQPADFVNPIIGTSNYGAAFPGPIAPRGMASISPFNVAGVKNTPMEKDSQWL SNPYVNENTFLTGFSQVNLSGVGCPDLGVILLMPTTGNVEIDHLKYGSTYSNEVAKAAYYSVNIDKYNVKGEFTASKRVG ISRFTFPKGQSNILLNLGLGLTNEEGAMVKVVSSTEIEGMRSVGSFCYNSPEDAYPVYFVAQFSKPADKFGVWKKPAKYN GVEAQWMGYNGKTRIMENTIKTVVGDSIGSYFTYKFDKQETVEVKIGISYVSIENARENLAKEVGNRSFDAIYKETYNEW NEELSKILVEGGSKDDNTIFYTALYHTLIHPNTLNDINGQYPVIKRSRIAKTDDTRYTVFSLWDTYRNVHPLMSLVYPKQ QSDMVKSMLTMFDENGWLPKWELNSTETFTMVGDPASIVITDTYLKGIHDFDVQKAYYAMLKGADQVENNPLRPGLKDYI KKGYLTTDNKGPVSTTQEYNISDYSISLMANEFGDKDNVKRFKERSLSYRKLFDKNLNLLRPRTPDGKWYEPFDPASGAN FEENVGFIEGNAWQYAFMVPHDINGLKKLMGGDQAFSAQLQKIFDTKQFDMANEPDIANPYLFNYVKGEEYKAQENVKRL VREYFKNEPKGLPGNDDTGTMSAWLVYSMMGIYPISPGDPIYTITTPMFHRVTIKLDPRYYKKESIVIERQENNGGKINS IELNGKTHNSFFISHDDFVNGTKLKVIQN
Sequences:
>Translated_749_residues MKPMVLNTNKFKTACILYMLFFSIMIFAQQPADFVNPIIGTSNYGAAFPGPIAPRGMASISPFNVAGVKNTPMEKDSQWL SNPYVNENTFLTGFSQVNLSGVGCPDLGVILLMPTTGNVEIDHLKYGSTYSNEVAKAAYYSVNIDKYNVKGEFTASKRVG ISRFTFPKGQSNILLNLGLGLTNEEGAMVKVVSSTEIEGMRSVGSFCYNSPEDAYPVYFVAQFSKPADKFGVWKKPAKYN GVEAQWMGYNGKTRIMENTIKTVVGDSIGSYFTYKFDKQETVEVKIGISYVSIENARENLAKEVGNRSFDAIYKETYNEW NEELSKILVEGGSKDDNTIFYTALYHTLIHPNTLNDINGQYPVIKRSRIAKTDDTRYTVFSLWDTYRNVHPLMSLVYPKQ QSDMVKSMLTMFDENGWLPKWELNSTETFTMVGDPASIVITDTYLKGIHDFDVQKAYYAMLKGADQVENNPLRPGLKDYI KKGYLTTDNKGPVSTTQEYNISDYSISLMANEFGDKDNVKRFKERSLSYRKLFDKNLNLLRPRTPDGKWYEPFDPASGAN FEENVGFIEGNAWQYAFMVPHDINGLKKLMGGDQAFSAQLQKIFDTKQFDMANEPDIANPYLFNYVKGEEYKAQENVKRL VREYFKNEPKGLPGNDDTGTMSAWLVYSMMGIYPISPGDPIYTITTPMFHRVTIKLDPRYYKKESIVIERQENNGGKINS IELNGKTHNSFFISHDDFVNGTKLKVIQN >Mature_749_residues MKPMVLNTNKFKTACILYMLFFSIMIFAQQPADFVNPIIGTSNYGAAFPGPIAPRGMASISPFNVAGVKNTPMEKDSQWL SNPYVNENTFLTGFSQVNLSGVGCPDLGVILLMPTTGNVEIDHLKYGSTYSNEVAKAAYYSVNIDKYNVKGEFTASKRVG ISRFTFPKGQSNILLNLGLGLTNEEGAMVKVVSSTEIEGMRSVGSFCYNSPEDAYPVYFVAQFSKPADKFGVWKKPAKYN GVEAQWMGYNGKTRIMENTIKTVVGDSIGSYFTYKFDKQETVEVKIGISYVSIENARENLAKEVGNRSFDAIYKETYNEW NEELSKILVEGGSKDDNTIFYTALYHTLIHPNTLNDINGQYPVIKRSRIAKTDDTRYTVFSLWDTYRNVHPLMSLVYPKQ QSDMVKSMLTMFDENGWLPKWELNSTETFTMVGDPASIVITDTYLKGIHDFDVQKAYYAMLKGADQVENNPLRPGLKDYI KKGYLTTDNKGPVSTTQEYNISDYSISLMANEFGDKDNVKRFKERSLSYRKLFDKNLNLLRPRTPDGKWYEPFDPASGAN FEENVGFIEGNAWQYAFMVPHDINGLKKLMGGDQAFSAQLQKIFDTKQFDMANEPDIANPYLFNYVKGEEYKAQENVKRL VREYFKNEPKGLPGNDDTGTMSAWLVYSMMGIYPISPGDPIYTITTPMFHRVTIKLDPRYYKKESIVIERQENNGGKINS IELNGKTHNSFFISHDDFVNGTKLKVIQN
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84810; Mature: 84810
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPMVLNTNKFKTACILYMLFFSIMIFAQQPADFVNPIIGTSNYGAAFPGPIAPRGMASI CCCEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SPFNVAGVKNTPMEKDSQWLSNPYVNENTFLTGFSQVNLSGVGCPDLGVILLMPTTGNVE CCEEECCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCEE IDHLKYGSTYSNEVAKAAYYSVNIDKYNVKGEFTASKRVGISRFTFPKGQSNILLNLGLG EEEEECCCCHHHHHHHEEEEEEEEEEEEECEEEEHHCCCCCEEEECCCCCCCEEEEECCC LTNEEGAMVKVVSSTEIEGMRSVGSFCYNSPEDAYPVYFVAQFSKPADKFGVWKKPAKYN CCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCC GVEAQWMGYNGKTRIMENTIKTVVGDSIGSYFTYKFDKQETVEVKIGISYVSIENARENL CCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEEEEEHHHHHHH AKEVGNRSFDAIYKETYNEWNEELSKILVEGGSKDDNTIFYTALYHTLIHPNTLNDINGQ HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCC YPVIKRSRIAKTDDTRYTVFSLWDTYRNVHPLMSLVYPKQQSDMVKSMLTMFDENGWLPK CCEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCE WELNSTETFTMVGDPASIVITDTYLKGIHDFDVQKAYYAMLKGADQVENNPLRPGLKDYI EECCCCEEEEEECCCCEEEEEEHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHH KKGYLTTDNKGPVSTTQEYNISDYSISLMANEFGDKDNVKRFKERSLSYRKLFDKNLNLL HCCCEECCCCCCCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHCCHHHHHHHCCCCEE RPRTPDGKWYEPFDPASGANFEENVGFIEGNAWQYAFMVPHDINGLKKLMGGDQAFSAQL CCCCCCCCCCCCCCCCCCCCCHHCCCEEECCCEEEEEECCCCHHHHHHHHCCCHHHHHHH QKIFDTKQFDMANEPDIANPYLFNYVKGEEYKAQENVKRLVREYFKNEPKGLPGNDDTGT HHHHCCHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH MSAWLVYSMMGIYPISPGDPIYTITTPMFHRVTIKLDPRYYKKESIVIERQENNGGKINS HHHHHHHHHHHCEECCCCCCEEEEECCCEEEEEEEECCCEECCCEEEEEEECCCCCEEEE IELNGKTHNSFFISHDDFVNGTKLKVIQN EEECCCCCCEEEEECCCCCCCCEEEEEEC >Mature Secondary Structure MKPMVLNTNKFKTACILYMLFFSIMIFAQQPADFVNPIIGTSNYGAAFPGPIAPRGMASI CCCEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SPFNVAGVKNTPMEKDSQWLSNPYVNENTFLTGFSQVNLSGVGCPDLGVILLMPTTGNVE CCEEECCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCEE IDHLKYGSTYSNEVAKAAYYSVNIDKYNVKGEFTASKRVGISRFTFPKGQSNILLNLGLG EEEEECCCCHHHHHHHEEEEEEEEEEEEECEEEEHHCCCCCEEEECCCCCCCEEEEECCC LTNEEGAMVKVVSSTEIEGMRSVGSFCYNSPEDAYPVYFVAQFSKPADKFGVWKKPAKYN CCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCC GVEAQWMGYNGKTRIMENTIKTVVGDSIGSYFTYKFDKQETVEVKIGISYVSIENARENL CCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEEEEEHHHHHHH AKEVGNRSFDAIYKETYNEWNEELSKILVEGGSKDDNTIFYTALYHTLIHPNTLNDINGQ HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCC YPVIKRSRIAKTDDTRYTVFSLWDTYRNVHPLMSLVYPKQQSDMVKSMLTMFDENGWLPK CCEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCE WELNSTETFTMVGDPASIVITDTYLKGIHDFDVQKAYYAMLKGADQVENNPLRPGLKDYI EECCCCEEEEEECCCCEEEEEEHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHH KKGYLTTDNKGPVSTTQEYNISDYSISLMANEFGDKDNVKRFKERSLSYRKLFDKNLNLL HCCCEECCCCCCCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHCCHHHHHHHCCCCEE RPRTPDGKWYEPFDPASGANFEENVGFIEGNAWQYAFMVPHDINGLKKLMGGDQAFSAQL CCCCCCCCCCCCCCCCCCCCCHHCCCEEECCCEEEEEECCCCHHHHHHHHCCCHHHHHHH QKIFDTKQFDMANEPDIANPYLFNYVKGEEYKAQENVKRLVREYFKNEPKGLPGNDDTGT HHHHCCHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH MSAWLVYSMMGIYPISPGDPIYTITTPMFHRVTIKLDPRYYKKESIVIERQENNGGKINS HHHHHHHHHHHCEECCCCCCEEEEECCCEEEEEEEECCCEECCCEEEEEEECCCCCEEEE IELNGKTHNSFFISHDDFVNGTKLKVIQN EEECCCCCCEEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA