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The map label for this gene is rfbC [H]

Identifier: 146299658

GI number: 146299658

Start: 2189424

End: 2190656

Strand: Direct

Name: rfbC [H]

Synonym: Fjoh_1898

Alternate gene names: 146299658

Gene position: 2189424-2190656 (Clockwise)

Preceding gene: 146299657

Following gene: 146299659

Centisome position: 35.91

GC content: 33.74

Gene sequence:

>1233_bases
ATGAAAGCATTAGAATCCAAAAGAGGACTGCCCCGTATTATTTATATAGGAAATGATGAGCCAGATCTTAAATCTGTAAA
ATTAGCCAGTTATGAGTCTAATGATTTAGAGGTAATGTATTTAAAGGATGATAAGGATATTAATAAATCTATCATTTCAT
TTAATCCAGACTGTATTGTAACTACTGTTAGTTCTCCTGAGCATTGTCTCAATCTGATGAACCTGCCAATAGACATAAGA
AGAAGATGGATAAATTTACCAGATTCAAAAAAAGATGAAATTGGTGAAATCGCATACAATTGTGCGATGAATTATATTCT
GTCCTATCAGACTCATGATTTGATTTCTTTTTTTACACCGATTTATAATACAGGTGAAAAACTTTTAAGGACTTATGAAT
CAATAAAAAATCAAACCTATATTAATTGGGAATGGGTAATAGTAAATGACTCAAATGATGACGGAAAAACTCTAAAGATT
GCTGAAGATATAGCTGCAAAAGATCTGCGTGTTAAAGTGTATGATTTTAAAGAAAAATCAGGAGGAGTAATTGGTGAAGT
TAAATATCGTGCTGCGTGTATGTGTAATGGAGATTACCTGGCAGAACTGGATCATGACGATTATCTTATACCAGATTGTG
CTTTTAATATAGTAGAAGCATTTAGAAAGTATCCGGAAGCTGGGTTTGTTTATTCAGACTGCGCAGAAATTGATGAGAAC
TGGAATTCCTTAACTTATCCAGACGAGTTTGCTTTTGGTTACGGGAAATACGAAAACCAGTTTGTGATGGGGAAATTGAT
GCAGGTCTATATTTCTATGAATATCAACCCCAAAACAATTCGTCATATAGTTGGAATACCCAATCATATTCGGGTATGGA
GAAAATCAGTATATCATCAAATTGGAGGACATAGAAGAAGATTATCTATTGCAGATGATTACGAATTAATGGTGCGGACT
TTTCTTGCGACCAAATTAATAAGAATACCTAAAATAGGTTATTTGCAATTTATTTATTCTAACGAAAACGCTGCAAATAC
TCACGATACAGCCAGAGGAGATATTCAACGCAGGGTTAGAACCATTGCTGCCTTTTATAATCAAAAAATAAAAGAGCGAT
TTGAAGAACTTGGCGTAAAAGATTGGGCGTACGAAGAAAATCCAACAAATCCATTATTAACCCAAAGCAAATTTGGGGCA
GAAGAAGGAGCTGTAAACCTGATTTTAGATTAA

Upstream 100 bases:

>100_bases
GTATTCTAATCTCAAAAATAGGTAATATCTTACTTTTTGGTATCTTTGCGTTTGTTAATCAAAGTAAATTTTTGTTTTAA
CTCTAAATTTAAGTTGACGA

Downstream 100 bases:

>100_bases
CATAGAATTTAGGGATATAACAAGTCTGGATTTTCAACTTTTAATAGACCTTTAATGTAAAGAATTAACTTTTTATAATA
TAAGACAAAAAGGAACAGTG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKALESKRGLPRIIYIGNDEPDLKSVKLASYESNDLEVMYLKDDKDINKSIISFNPDCIVTTVSSPEHCLNLMNLPIDIR
RRWINLPDSKKDEIGEIAYNCAMNYILSYQTHDLISFFTPIYNTGEKLLRTYESIKNQTYINWEWVIVNDSNDDGKTLKI
AEDIAAKDLRVKVYDFKEKSGGVIGEVKYRAACMCNGDYLAELDHDDYLIPDCAFNIVEAFRKYPEAGFVYSDCAEIDEN
WNSLTYPDEFAFGYGKYENQFVMGKLMQVYISMNINPKTIRHIVGIPNHIRVWRKSVYHQIGGHRRRLSIADDYELMVRT
FLATKLIRIPKIGYLQFIYSNENAANTHDTARGDIQRRVRTIAAFYNQKIKERFEELGVKDWAYEENPTNPLLTQSKFGA
EEGAVNLILD

Sequences:

>Translated_410_residues
MKALESKRGLPRIIYIGNDEPDLKSVKLASYESNDLEVMYLKDDKDINKSIISFNPDCIVTTVSSPEHCLNLMNLPIDIR
RRWINLPDSKKDEIGEIAYNCAMNYILSYQTHDLISFFTPIYNTGEKLLRTYESIKNQTYINWEWVIVNDSNDDGKTLKI
AEDIAAKDLRVKVYDFKEKSGGVIGEVKYRAACMCNGDYLAELDHDDYLIPDCAFNIVEAFRKYPEAGFVYSDCAEIDEN
WNSLTYPDEFAFGYGKYENQFVMGKLMQVYISMNINPKTIRHIVGIPNHIRVWRKSVYHQIGGHRRRLSIADDYELMVRT
FLATKLIRIPKIGYLQFIYSNENAANTHDTARGDIQRRVRTIAAFYNQKIKERFEELGVKDWAYEENPTNPLLTQSKFGA
EEGAVNLILD
>Mature_410_residues
MKALESKRGLPRIIYIGNDEPDLKSVKLASYESNDLEVMYLKDDKDINKSIISFNPDCIVTTVSSPEHCLNLMNLPIDIR
RRWINLPDSKKDEIGEIAYNCAMNYILSYQTHDLISFFTPIYNTGEKLLRTYESIKNQTYINWEWVIVNDSNDDGKTLKI
AEDIAAKDLRVKVYDFKEKSGGVIGEVKYRAACMCNGDYLAELDHDDYLIPDCAFNIVEAFRKYPEAGFVYSDCAEIDEN
WNSLTYPDEFAFGYGKYENQFVMGKLMQVYISMNINPKTIRHIVGIPNHIRVWRKSVYHQIGGHRRRLSIADDYELMVRT
FLATKLIRIPKIGYLQFIYSNENAANTHDTARGDIQRRVRTIAAFYNQKIKERFEELGVKDWAYEENPTNPLLTQSKFGA
EEGAVNLILD

Specific function: Involved in O-antigen biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 47445; Mature: 47445

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALESKRGLPRIIYIGNDEPDLKSVKLASYESNDLEVMYLKDDKDINKSIISFNPDCIV
CCCCCHHCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHEECCCEEE
TTVSSPEHCLNLMNLPIDIRRRWINLPDSKKDEIGEIAYNCAMNYILSYQTHDLISFFTP
EECCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IYNTGEKLLRTYESIKNQTYINWEWVIVNDSNDDGKTLKIAEDIAAKDLRVKVYDFKEKS
HHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCEEEEHHHHCCCCEEEEEEEEECCC
GGVIGEVKYRAACMCNGDYLAELDHDDYLIPDCAFNIVEAFRKYPEAGFVYSDCAEIDEN
CCEEEEEEEEEEEEECCCEEEEECCCCEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
WNSLTYPDEFAFGYGKYENQFVMGKLMQVYISMNINPKTIRHIVGIPNHIRVWRKSVYHQ
CCCCCCCCHHCCCCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHCCCHHHHHHHHHHHHH
IGGHRRRLSIADDYELMVRTFLATKLIRIPKIGYLQFIYSNENAANTHDTARGDIQRRVR
HCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH
TIAAFYNQKIKERFEELGVKDWAYEENPTNPLLTQSKFGAEEGAVNLILD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKALESKRGLPRIIYIGNDEPDLKSVKLASYESNDLEVMYLKDDKDINKSIISFNPDCIV
CCCCCHHCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHEECCCEEE
TTVSSPEHCLNLMNLPIDIRRRWINLPDSKKDEIGEIAYNCAMNYILSYQTHDLISFFTP
EECCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IYNTGEKLLRTYESIKNQTYINWEWVIVNDSNDDGKTLKIAEDIAAKDLRVKVYDFKEKS
HHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCEEEEHHHHCCCCEEEEEEEEECCC
GGVIGEVKYRAACMCNGDYLAELDHDDYLIPDCAFNIVEAFRKYPEAGFVYSDCAEIDEN
CCEEEEEEEEEEEEECCCEEEEECCCCEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
WNSLTYPDEFAFGYGKYENQFVMGKLMQVYISMNINPKTIRHIVGIPNHIRVWRKSVYHQ
CCCCCCCCHHCCCCCCCCCHHHHHHHHHHHEECCCCHHHHHHHHCCCHHHHHHHHHHHHH
IGGHRRRLSIADDYELMVRTFLATKLIRIPKIGYLQFIYSNENAANTHDTARGDIQRRVR
HCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH
TIAAFYNQKIKERFEELGVKDWAYEENPTNPLLTQSKFGAEEGAVNLILD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]