| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299657
Identifier: 146299657
GI number: 146299657
Start: 2188348
End: 2189307
Strand: Direct
Name: 146299657
Synonym: Fjoh_1897
Alternate gene names: NA
Gene position: 2188348-2189307 (Clockwise)
Preceding gene: 146299656
Following gene: 146299658
Centisome position: 35.89
GC content: 32.81
Gene sequence:
>960_bases ATGCAGTTCAGAACCCAAATCCCAATTTCAAAAAGTAATAATCCGATTGATTATAATTCGAAAATACTTTCTGTTGGTTC TTGTTTTGCAGAAAATATGGCTGGGAAATTTGATTATTTTAAATTTCAAAATGAAACCAATCCGTTTGGGATTATTTTTA ATCCTGTTTCAATTGAAAAGCTGTTTGAAAGAGTTTGTAACAAACAGTGGTTTACAGAAAAAGACGTTTTCTTTTACAAC GAGCGCTGGCATAGCTTTGAGGTTCATTCTGATTTAAGTAATGCTGACAGGCAGGAATTACTGGAAACGCTCAACAAAGC TATTACAGAAACCAATAAACAATTAAAAGAAGCTTCAGATATCATCATTACATTTGGTACTTCCTGGGTTTACAGAAACC TTGTAAGTGAGCAAATAGCCGCCAATTGTCATAAAGTCCCGCAAAAACAATTCTCAAAAGAATTATTATCTGTTGATGTA ATTCAGAGAAGCATTCAAAAAACAATAGATTTAATTCAGGTTTTAAATCCTGATATTAATTTCATTTTTACGATTTCGCC AGTGCGCCACATAAAAGATGGATTTGTAGAAAACCAGTTAAGTAAATCTCATTTGTTTTCAGCGTTGCACCAAGTTTTAA AAATTCACAATTCACAATTCATAACTCATAATTATTTCCCTTCTTACGAAATTGTGATGGACGAACTTCGCGATTATCGT TTTTATAATGAAGATATGCTTCACCCCAACCAAATTGCGATTGATTACATTTGGAAACTGTTCAGCGAAAATTACATTTC GCAAGAAAGTGTTTTAATAATGCAGGAAGTAGACGAAATTCAAAAAAGCCTTCGCCACAGAAGCTTCAATCCAGAATCTG AACAGCACCAAAAATTCTTAGCTAAACTTCAGCAGAAAATAAACCTTTTAGGAGAAAAATCACCACACATTAAATTCTAA
Upstream 100 bases:
>100_bases AATTAAAGACTATACACTTTATTATAAAAACCAAATACTTTTCGTATTTGGTTTTTTTATTGGCAAAAATTGGTGAAATT CGTGTTTAAATTTAGAAATC
Downstream 100 bases:
>100_bases ATCGGGGGATCAAATAGTATTCTAATCTCAAAAATAGGTAATATCTTACTTTTTGGTATCTTTGCGTTTGTTAATCAAAG TAAATTTTTGTTTTAACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: GSCFA Domain Protein; Gscfa Domain Protein; GSCFA Family Protein
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MQFRTQIPISKSNNPIDYNSKILSVGSCFAENMAGKFDYFKFQNETNPFGIIFNPVSIEKLFERVCNKQWFTEKDVFFYN ERWHSFEVHSDLSNADRQELLETLNKAITETNKQLKEASDIIITFGTSWVYRNLVSEQIAANCHKVPQKQFSKELLSVDV IQRSIQKTIDLIQVLNPDINFIFTISPVRHIKDGFVENQLSKSHLFSALHQVLKIHNSQFITHNYFPSYEIVMDELRDYR FYNEDMLHPNQIAIDYIWKLFSENYISQESVLIMQEVDEIQKSLRHRSFNPESEQHQKFLAKLQQKINLLGEKSPHIKF
Sequences:
>Translated_319_residues MQFRTQIPISKSNNPIDYNSKILSVGSCFAENMAGKFDYFKFQNETNPFGIIFNPVSIEKLFERVCNKQWFTEKDVFFYN ERWHSFEVHSDLSNADRQELLETLNKAITETNKQLKEASDIIITFGTSWVYRNLVSEQIAANCHKVPQKQFSKELLSVDV IQRSIQKTIDLIQVLNPDINFIFTISPVRHIKDGFVENQLSKSHLFSALHQVLKIHNSQFITHNYFPSYEIVMDELRDYR FYNEDMLHPNQIAIDYIWKLFSENYISQESVLIMQEVDEIQKSLRHRSFNPESEQHQKFLAKLQQKINLLGEKSPHIKF >Mature_319_residues MQFRTQIPISKSNNPIDYNSKILSVGSCFAENMAGKFDYFKFQNETNPFGIIFNPVSIEKLFERVCNKQWFTEKDVFFYN ERWHSFEVHSDLSNADRQELLETLNKAITETNKQLKEASDIIITFGTSWVYRNLVSEQIAANCHKVPQKQFSKELLSVDV IQRSIQKTIDLIQVLNPDINFIFTISPVRHIKDGFVENQLSKSHLFSALHQVLKIHNSQFITHNYFPSYEIVMDELRDYR FYNEDMLHPNQIAIDYIWKLFSENYISQESVLIMQEVDEIQKSLRHRSFNPESEQHQKFLAKLQQKINLLGEKSPHIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37684; Mature: 37684
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFRTQIPISKSNNPIDYNSKILSVGSCFAENMAGKFDYFKFQNETNPFGIIFNPVSIEK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEECCCCCCEEEEECCCCHHH LFERVCNKQWFTEKDVFFYNERWHSFEVHSDLSNADRQELLETLNKAITETNKQLKEASD HHHHHHCCCCCCCCCEEEECCCCCCEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IIITFGTSWVYRNLVSEQIAANCHKVPQKQFSKELLSVDVIQRSIQKTIDLIQVLNPDIN EEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FIFTISPVRHIKDGFVENQLSKSHLFSALHQVLKIHNSQFITHNYFPSYEIVMDELRDYR EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHH FYNEDMLHPNQIAIDYIWKLFSENYISQESVLIMQEVDEIQKSLRHRSFNPESEQHQKFL CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AKLQQKINLLGEKSPHIKF HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQFRTQIPISKSNNPIDYNSKILSVGSCFAENMAGKFDYFKFQNETNPFGIIFNPVSIEK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEECCCCCCEEEEECCCCHHH LFERVCNKQWFTEKDVFFYNERWHSFEVHSDLSNADRQELLETLNKAITETNKQLKEASD HHHHHHCCCCCCCCCEEEECCCCCCEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IIITFGTSWVYRNLVSEQIAANCHKVPQKQFSKELLSVDVIQRSIQKTIDLIQVLNPDIN EEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FIFTISPVRHIKDGFVENQLSKSHLFSALHQVLKIHNSQFITHNYFPSYEIVMDELRDYR EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHH FYNEDMLHPNQIAIDYIWKLFSENYISQESVLIMQEVDEIQKSLRHRSFNPESEQHQKFL CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AKLQQKINLLGEKSPHIKF HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA