| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299445
Identifier: 146299445
GI number: 146299445
Start: 1952773
End: 1954101
Strand: Direct
Name: 146299445
Synonym: Fjoh_1685
Alternate gene names: NA
Gene position: 1952773-1954101 (Clockwise)
Preceding gene: 146299438
Following gene: 146299446
Centisome position: 32.03
GC content: 33.78
Gene sequence:
>1329_bases ATGGGCAAGTTTTTATTAATGCTGTTTTTTGCGTTTACTATATTTTCATGCGGTACAGATACTGATGCCGGCGAGTTTGT TGTTGGATCAGATTATCTTGCTCTCAATAATAAAGTTGTAATGGTTGATACCGTTACGGTTGAAATGTCTACAATAAATT TTGATTCGCTGGTAACTTCAAGCCAGAGCCGAATTTTAGTTGGAAATTACGATGATCCAATTTTTGGAAAAATAAAATCG AACAGCTATTTTCAAATTTCCGGAAGTTCGTATTCGTTGAGTAATTCAGGATCAGATACCGAAGCGGTTAATTTTGTTTT TGATTCGATTTCGATGATTTTAAAATACGATAACTATTATTATGGTGATACAACTCAGGTTCAAAAATTCGATATCCATC GTTTAACTCAAAAAGTAAAACCAAACGTAGACGATAAAAGTTTTTATAATAATTCTACTTTGACTTACAGTGATGAAGTT CTGGGAACAATTTCATATAAACCCAGACCAACAGAGAAGGATTCGATTAATATTAGAATGAGTGACGCGTTTGGACAAGA TATTTTTCAGAAAATCAAAAAAAGAGAAATTACAGGTTTTGACAATTTTACAGAGTATCTAAAAGGACTTGTATTAGTGC CATCCGGAACTAACTCATCAAGTGCAATTGGGTTTAATGTTTCAACGAGCAAAGTGAGGTTGTACTATTCTAAATATCAA GCCGATAATGATGATGATTCGCTTATTTTAGATTTTACTATTGCAGATGCTTCCAAACAGTTTAATTCTGTCTCGCTGGA TAAAACCGGAACAATAATTCAAAATTTACCCATTTCTACCCAAAGGCTTTCGAGTTCGCAGACCAATAAGCAGGGATTTA TTCAATCTGGCACAGGAGTGGCCTGCAGGATTGATTTCCCAAATATAAAACAGCTTAAATACATTTCTGCTAATGGAGCA ATTGTCGATGCACAGCTGTTCTTAAAACCGGTTAATAATTCGTATTCCGATAAATATCCGCTGTCTGATTCCTTAAAGGT TTATGTGGGAGATAATTTAAACAGAATCAGCAGTCCTTTGCTCAATGCCGCTGGTAACTCTGTTTATGGAATTTTAAATA AAAAAAGCGATGAGTTCAATGAAAACATTGGATATACAATACCGTTAGGGAATTTTCTACAGAAAGAAATGCTGAAAGCT TCTGATTCCAGGTCTGCATTAATTTTAACCTTACCAGGAATATCTAAATCAGTTGACAGACTTGTTTTAGGAGATCAAAA GCATTCGCAAAATAAAATTCAAATTAAGGTTTATTACATCTCATATTAA
Upstream 100 bases:
>100_bases GTAGATGTTTTATCGCCATTTATAGTCGAAATATGCTTGCCTGTATATGTTATAGTGAACTGCAGAATAGTGCCTTTTAT ATTTGCCAAAAAAATTGATT
Downstream 100 bases:
>100_bases ATGAAAAATAAAATAGTTTTTTTTAGCTGCTTCATTTTAATGTCGCTTACTTCGTTTTCACAAAGTATATCAAGTTCTCC ATATTCATTATATGGTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MGKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTSSQSRILVGNYDDPIFGKIKS NSYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYYYGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEV LGTISYKPRPTEKDSINIRMSDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQ ADNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGVACRIDFPNIKQLKYISANGA IVDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPLLNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKA SDSRSALILTLPGISKSVDRLVLGDQKHSQNKIQIKVYYISY
Sequences:
>Translated_442_residues MGKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTSSQSRILVGNYDDPIFGKIKS NSYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYYYGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEV LGTISYKPRPTEKDSINIRMSDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQ ADNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGVACRIDFPNIKQLKYISANGA IVDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPLLNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKA SDSRSALILTLPGISKSVDRLVLGDQKHSQNKIQIKVYYISY >Mature_441_residues GKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTSSQSRILVGNYDDPIFGKIKSN SYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYYYGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEVL GTISYKPRPTEKDSINIRMSDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQA DNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGVACRIDFPNIKQLKYISANGAI VDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPLLNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKAS DSRSALILTLPGISKSVDRLVLGDQKHSQNKIQIKVYYISY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49150; Mature: 49019
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTS CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCEEEEEEEEEEEEEEECHHHHHCC SQSRILVGNYDDPIFGKIKSNSYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYY CCCEEEEECCCCCCEEEECCCCEEEECCCEEEECCCCCCCHHHHHHHHHHEEEEEECCEE YGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEVLGTISYKPRPTEKDSINIRM ECCCCEEEEHHHHHHHHHHCCCCCCHHCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEE SDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQ CCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCEEEEEEEEEC ADNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGV CCCCCCCEEEEEEEECCCCCCCCEECCCCCCEEECCCCCHHHHCCCCCCCCCCEECCCCE ACRIDFPNIKQLKYISANGAIVDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPL EEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHH LNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKASDSRSALILTLPGISKSVDR HHHCCCEEEEEECCCCCHHCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH LVLGDQKHSQNKIQIKVYYISY EEECCCCCCCCEEEEEEEEEEC >Mature Secondary Structure GKFLLMLFFAFTIFSCGTDTDAGEFVVGSDYLALNNKVVMVDTVTVEMSTINFDSLVTS CHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCEEEEEEEEEEEEEEECHHHHHCC SQSRILVGNYDDPIFGKIKSNSYFQISGSSYSLSNSGSDTEAVNFVFDSISMILKYDNYY CCCEEEEECCCCCCEEEECCCCEEEECCCEEEECCCCCCCHHHHHHHHHHEEEEEECCEE YGDTTQVQKFDIHRLTQKVKPNVDDKSFYNNSTLTYSDEVLGTISYKPRPTEKDSINIRM ECCCCEEEEHHHHHHHHHHCCCCCCHHCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEE SDAFGQDIFQKIKKREITGFDNFTEYLKGLVLVPSGTNSSSAIGFNVSTSKVRLYYSKYQ CCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCEEEEEEEEEC ADNDDDSLILDFTIADASKQFNSVSLDKTGTIIQNLPISTQRLSSSQTNKQGFIQSGTGV CCCCCCCEEEEEEEECCCCCCCCEECCCCCCEEECCCCCHHHHCCCCCCCCCCEECCCCE ACRIDFPNIKQLKYISANGAIVDAQLFLKPVNNSYSDKYPLSDSLKVYVGDNLNRISSPL EEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHH LNAAGNSVYGILNKKSDEFNENIGYTIPLGNFLQKEMLKASDSRSALILTLPGISKSVDR HHHCCCEEEEEECCCCCHHCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH LVLGDQKHSQNKIQIKVYYISY EEECCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA