Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299351

Identifier: 146299351

GI number: 146299351

Start: 1842299

End: 1842688

Strand: Direct

Name: 146299351

Synonym: Fjoh_1591

Alternate gene names: NA

Gene position: 1842299-1842688 (Clockwise)

Preceding gene: 146299350

Following gene: 146299353

Centisome position: 30.22

GC content: 31.28

Gene sequence:

>390_bases
ATGAGTTCAATATTCACTAAAATAGTAAACGGAGAAATTCCTGCCTATAAAATAGCCGAAGATGATAACTATCTGGCTTT
TTTAGATGTAAATCCAAACGCAAAAGGTCATACACTTTGTATTCCGAAACAAGAAATCGACAAGATTTTTGATATGGATG
AAGAATTGTATTTAGGATTAATGAAATTCTCTAAAAAAATTGCAGCAGCATTAGAAAAAACAGTTCCTTGTAAAAGAATT
GGAATTGCGGTTGTAGGTTTAGAAGTTCCTCATGCACACGTACATTTAATTCCATTAAATCATATGGATGAAATGCGTTT
TCAGGACAAAGTTTCGCTTTCAAAAGAAGAATTTGAAGCTTTAGCAAAAGATATTCAGTCTAATCTTTAA

Upstream 100 bases:

>100_bases
GAACTTTGAAATTCGAAATTCTTGAAATTACAAGAGAATAAATTTTTTATAGTTTAACCGTTAAATCGGTTAAGCGGTTA
ACCAGTTAAACGAATAAACT

Downstream 100 bases:

>100_bases
GATTAAAACCAAAATAAAAAACACCAATTCAGTTAATGAGTTGGTGTTTTTTTATGTCTAATTTTTAAGCCGGACTGGTA
GTTTCATAAGTAATCTGAAA

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGLMKFSKKIAAALEKTVPCKRI
GIAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEALAKDIQSNL

Sequences:

>Translated_129_residues
MSSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGLMKFSKKIAAALEKTVPCKRI
GIAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEALAKDIQSNL
>Mature_128_residues
SSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGLMKFSKKIAAALEKTVPCKRIG
IAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEALAKDIQSNL

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=98, Percent_Identity=37.7551020408163, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 14540; Mature: 14409

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGL
CCHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCHHHHHHH
MKFSKKIAAALEKTVPCKRIGIAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEA
HHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCHHHHHH
LAKDIQSNL
HHHHHHHCC
>Mature Secondary Structure 
SSIFTKIVNGEIPAYKIAEDDNYLAFLDVNPNAKGHTLCIPKQEIDKIFDMDEELYLGL
CHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEECCHHHHHHHHCCCHHHHHHH
MKFSKKIAAALEKTVPCKRIGIAVVGLEVPHAHVHLIPLNHMDEMRFQDKVSLSKEEFEA
HHHHHHHHHHHHHCCCHHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCHHHHHH
LAKDIQSNL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]