| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is hppA [H]
Identifier: 146299239
GI number: 146299239
Start: 1694049
End: 1696592
Strand: Direct
Name: hppA [H]
Synonym: Fjoh_1479
Alternate gene names: 146299239
Gene position: 1694049-1696592 (Clockwise)
Preceding gene: 146299238
Following gene: 146299241
Centisome position: 27.79
GC content: 38.52
Gene sequence:
>2544_bases ATGAATGCATTTATGATTTACCTGCCAATTGTCATGGCAGTTTTAGGATTACTTTTCATGGGAATAAAAAGGACTTGGGT TTTAAAACAAGACGCTGGAGACGGTAAAATGAAAGAGATTTCAGATTACATCTACGAAGGAGCCTTAGCCTTCCTAAAAG CCGAATACAAACTGTTAACCATCTTTGTAATTATTGCCAGCTTAGCTTTGGCAGGAATCACTTTTATTCCGGGAGTAAAA ACCCATTTATTAATTGTAATTGCCTTTATTTTTGGTGCATTATTTTCTGCTTACGCCGGAAATATTGGAATGAAAATAGC AACTAAAACAAACGTAAGAACTACTCAGGCCGCGCGTACAAGTTTACCGCAGGCATTAAAAGTTTCTTTTGGCGGCGGCA CCGTAATGGGTTTAGGCGTTGCTGGATTAGCAGTATTAGGTTTAACAGCCTTTTTTATAATTTTCTTTAATTTATTTTCT GGCGGAGTCTGGAAAGATACCGAAACAATGACCGTTGTTTTAGAAACTTTAGCGGGATTTTCGCTTGGTGCAGAATCAAT TGCTTTGTTTGCCAGAGTTGGAGGCGGAATCTACACAAAAGCAGCCGATGTTGGTGCTGACTTAGTTGGTAAAGTTGAAG CTGGAATTCCAGAAGATGATCCGCGTAATCCTGCAACAATTGCAGATAACGTTGGAGATAACGTAGGTGATGTTGCCGGT ATGGGAGCTGATTTATTTGGTTCGTATGTGGCAACCGTTTTGGCCGCAATGGTTCTAGGGAATTATGTTATAAAAGATAT GGGCGGCAGTATTAATGACGCTTTTGGCGGTATTGGACCAATTTTACTTCCAATGGCAATTGCCGGTTTCGGAATTTTAT TCTCAATTATTGGAACAACTTTAGTGAAAATTTCAGATGATAATGCTAAAGAAGCACAAGTACAGAAAGCATTAAATATA GGAAACTGGGTTTCAATTGTTTTAACAGCTGTAGCTTGTTTCTTTTTAGTACAGCACATGCTTCCTGAAACGATGCAGAT GAGTTTCTTTGGAGAAGGATCAAAAGCCATTTCATCAATGCGTGTTTTTTACGCGACTTTGGTTGGATTAGTTGTTGGAG GTGCTATCTCATCAGTAACTGAATATTATACCGGATTAGGAACAAAACCAGTAATGGCTATTGTTCAAAAATCATCTACA GGAGCAGGAACTAACGTAATTGCAGGTTTAGCAACAGGAATGATTTCGACTTTTCCAACCGTATTATTGTTTGCTGTAGC AATTTGGATTTCGTATGCTTTAGCAGGATTCTATGGAGTAGCTTTAGCGGCTTCGGCCATGATGGCTACAACAGCAATGC AATTGGCAATTGATGCTTTTGGGCCAATATCTGACAACGCTGGTGGAATCGCCGAAATGAGCGAATTACCAAAAGAGGTT CGCACCAGAACCGATATTTTAGATTCAGTAGGAAACACAACTGCAGCAACCGGAAAAGGATTTGCGATTGCTTCTGCAGC TTTAACTTCATTAGCCTTATTTGCTGCTTACGTAACTTTTACAGGAATTGATGGAATTAATATTTTTAAGGCGCCAGTTT TAGCCATGTTATTTGTGGGTGGAATGATTCCGGTAGTTTTCTCAGCTTTAGCGATGAATTCTGTTGGAAAAGCCGCAATG GATATGGTTTACGAAGTACGTCGTCAGTTTAAGGAAATTCCGGGAATTATGGAAGGAACCGGAAAACCGGAGTATGGAAA ATGTGTTGAAATTTCTACAAAAGCTGCTTTGCGTGAAATGATGCTTCCGGGAATTTTAACGATTGGTTTTCCAATTGCAA TTGTACTTTTAGGAAAATTAGTTTACTCAGATAATAACCAGTTAATTGCTGAAATGCTAGGCGGATATATGGCTGGAGTT ACGGTTTCTGGAGTTCTTTGGGCTGTTTTTCAAAACAACGCCGGAGGTGCGTGGGACAATGCTAAAAAATCTTTTGAAGC CGGAGTTATGATCAATGGAGAAATGACATACAAAGGTTCTGATGCACATAAAGCAGCGGTTACGGGAGATACAGTTGGAG ATCCATTTAAAGATACTTCAGGACCTTCAATGAATATTTTAATCAAATTAACGTGTTTAATTGGATTGGTAATTGCACCA ATTTTAGGAGAAGGACATTCTCCATCAGACATTGCAGGAAAAGCTTCTTGCTGTGCAAAAATAGAAATGCATGCCGGAGT TTCTAAATGCGGTGATATGTCTGGAATGACAAAAGAAGAATGTATTAAAATGTGTAAAGAAAAAGGCTGTTCGCCAGAAG AAACAGCAAAATGTCTGGCTCATTTTGATGCAAGTGGAAAATATCAAAAAACAGACTGTTTTGATACAAGTAAATATGAG AAAAAATCAGTTAATGTTGAAGTGAAAAATATAAACGGAAAAACCACAGGAACTGTTACTAAAACAGAAAATGGTAAAAC AACAACCGAAGTTTTCGAAGGAACCGAAGAAGAAGTTTTAGCAAAAGTGGAAGCCGCTAAATAA
Upstream 100 bases:
>100_bases AATTTATAAAAAAAGCAATACTGCCGTCAGGAGTATTGCTTTTTTGTTTAAATTCGTTTTAGTTAGTTTGTTGACTATTA ACCAAAACCAATAAAATATT
Downstream 100 bases:
>100_bases TAACTTTGACAACATTTCAAAATAAAAAAATGCCTCTAAAGAAATTTAGCGGCATTTTTTGTATCAAATTTTCTCAATTT TAATAATATCTGTTTTATTG
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound sodium-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; Na(+)-PPase [H]
Number of amino acids: Translated: 847; Mature: 847
Protein sequence:
>847_residues MNAFMIYLPIVMAVLGLLFMGIKRTWVLKQDAGDGKMKEISDYIYEGALAFLKAEYKLLTIFVIIASLALAGITFIPGVK THLLIVIAFIFGALFSAYAGNIGMKIATKTNVRTTQAARTSLPQALKVSFGGGTVMGLGVAGLAVLGLTAFFIIFFNLFS GGVWKDTETMTVVLETLAGFSLGAESIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDVAG MGADLFGSYVATVLAAMVLGNYVIKDMGGSINDAFGGIGPILLPMAIAGFGILFSIIGTTLVKISDDNAKEAQVQKALNI GNWVSIVLTAVACFFLVQHMLPETMQMSFFGEGSKAISSMRVFYATLVGLVVGGAISSVTEYYTGLGTKPVMAIVQKSST GAGTNVIAGLATGMISTFPTVLLFAVAIWISYALAGFYGVALAASAMMATTAMQLAIDAFGPISDNAGGIAEMSELPKEV RTRTDILDSVGNTTAATGKGFAIASAALTSLALFAAYVTFTGIDGINIFKAPVLAMLFVGGMIPVVFSALAMNSVGKAAM DMVYEVRRQFKEIPGIMEGTGKPEYGKCVEISTKAALREMMLPGILTIGFPIAIVLLGKLVYSDNNQLIAEMLGGYMAGV TVSGVLWAVFQNNAGGAWDNAKKSFEAGVMINGEMTYKGSDAHKAAVTGDTVGDPFKDTSGPSMNILIKLTCLIGLVIAP ILGEGHSPSDIAGKASCCAKIEMHAGVSKCGDMSGMTKEECIKMCKEKGCSPEETAKCLAHFDASGKYQKTDCFDTSKYE KKSVNVEVKNINGKTTGTVTKTENGKTTTEVFEGTEEEVLAKVEAAK
Sequences:
>Translated_847_residues MNAFMIYLPIVMAVLGLLFMGIKRTWVLKQDAGDGKMKEISDYIYEGALAFLKAEYKLLTIFVIIASLALAGITFIPGVK THLLIVIAFIFGALFSAYAGNIGMKIATKTNVRTTQAARTSLPQALKVSFGGGTVMGLGVAGLAVLGLTAFFIIFFNLFS GGVWKDTETMTVVLETLAGFSLGAESIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDVAG MGADLFGSYVATVLAAMVLGNYVIKDMGGSINDAFGGIGPILLPMAIAGFGILFSIIGTTLVKISDDNAKEAQVQKALNI GNWVSIVLTAVACFFLVQHMLPETMQMSFFGEGSKAISSMRVFYATLVGLVVGGAISSVTEYYTGLGTKPVMAIVQKSST GAGTNVIAGLATGMISTFPTVLLFAVAIWISYALAGFYGVALAASAMMATTAMQLAIDAFGPISDNAGGIAEMSELPKEV RTRTDILDSVGNTTAATGKGFAIASAALTSLALFAAYVTFTGIDGINIFKAPVLAMLFVGGMIPVVFSALAMNSVGKAAM DMVYEVRRQFKEIPGIMEGTGKPEYGKCVEISTKAALREMMLPGILTIGFPIAIVLLGKLVYSDNNQLIAEMLGGYMAGV TVSGVLWAVFQNNAGGAWDNAKKSFEAGVMINGEMTYKGSDAHKAAVTGDTVGDPFKDTSGPSMNILIKLTCLIGLVIAP ILGEGHSPSDIAGKASCCAKIEMHAGVSKCGDMSGMTKEECIKMCKEKGCSPEETAKCLAHFDASGKYQKTDCFDTSKYE KKSVNVEVKNINGKTTGTVTKTENGKTTTEVFEGTEEEVLAKVEAAK >Mature_847_residues MNAFMIYLPIVMAVLGLLFMGIKRTWVLKQDAGDGKMKEISDYIYEGALAFLKAEYKLLTIFVIIASLALAGITFIPGVK THLLIVIAFIFGALFSAYAGNIGMKIATKTNVRTTQAARTSLPQALKVSFGGGTVMGLGVAGLAVLGLTAFFIIFFNLFS GGVWKDTETMTVVLETLAGFSLGAESIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDVAG MGADLFGSYVATVLAAMVLGNYVIKDMGGSINDAFGGIGPILLPMAIAGFGILFSIIGTTLVKISDDNAKEAQVQKALNI GNWVSIVLTAVACFFLVQHMLPETMQMSFFGEGSKAISSMRVFYATLVGLVVGGAISSVTEYYTGLGTKPVMAIVQKSST GAGTNVIAGLATGMISTFPTVLLFAVAIWISYALAGFYGVALAASAMMATTAMQLAIDAFGPISDNAGGIAEMSELPKEV RTRTDILDSVGNTTAATGKGFAIASAALTSLALFAAYVTFTGIDGINIFKAPVLAMLFVGGMIPVVFSALAMNSVGKAAM DMVYEVRRQFKEIPGIMEGTGKPEYGKCVEISTKAALREMMLPGILTIGFPIAIVLLGKLVYSDNNQLIAEMLGGYMAGV TVSGVLWAVFQNNAGGAWDNAKKSFEAGVMINGEMTYKGSDAHKAAVTGDTVGDPFKDTSGPSMNILIKLTCLIGLVIAP ILGEGHSPSDIAGKASCCAKIEMHAGVSKCGDMSGMTKEECIKMCKEKGCSPEETAKCLAHFDASGKYQKTDCFDTSKYE KKSVNVEVKNINGKTTGTVTKTENGKTTTEVFEGTEEEVLAKVEAAK
Specific function: Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 88562; Mature: 88562
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAFMIYLPIVMAVLGLLFMGIKRTWVLKQDAGDGKMKEISDYIYEGALAFLKAEYKLLT CCCEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IFVIIASLALAGITFIPGVKTHLLIVIAFIFGALFSAYAGNIGMKIATKTNVRTTQAART HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH SLPQALKVSFGGGTVMGLGVAGLAVLGLTAFFIIFFNLFSGGVWKDTETMTVVLETLAGF CCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC SLGAESIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDVAG CCCHHHHHHHHHHCCCCEEHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHC MGADLFGSYVATVLAAMVLGNYVIKDMGGSINDAFGGIGPILLPMAIAGFGILFSIIGTT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LVKISDDNAKEAQVQKALNIGNWVSIVLTAVACFFLVQHMLPETMQMSFFGEGSKAISSM EEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH RVFYATLVGLVVGGAISSVTEYYTGLGTKPVMAIVQKSSTGAGTNVIAGLATGMISTFPT HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VLLFAVAIWISYALAGFYGVALAASAMMATTAMQLAIDAFGPISDNAGGIAEMSELPKEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RTRTDILDSVGNTTAATGKGFAIASAALTSLALFAAYVTFTGIDGINIFKAPVLAMLFVG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GMIPVVFSALAMNSVGKAAMDMVYEVRRQFKEIPGIMEGTGKPEYGKCVEISTKAALREM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHH MLPGILTIGFPIAIVLLGKLVYSDNNQLIAEMLGGYMAGVTVSGVLWAVFQNNAGGAWDN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCH AKKSFEAGVMINGEMTYKGSDAHKAAVTGDTVGDPFKDTSGPSMNILIKLTCLIGLVIAP HHHHCCCCEEECCEEEECCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ILGEGHSPSDIAGKASCCAKIEMHAGVSKCGDMSGMTKEECIKMCKEKGCSPEETAKCLA HHCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH HFDASGKYQKTDCFDTSKYEKKSVNVEVKNINGKTTGTVTKTENGKTTTEVFEGTEEEVL HCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHCCCHHHHH AKVEAAK HHHHCCC >Mature Secondary Structure MNAFMIYLPIVMAVLGLLFMGIKRTWVLKQDAGDGKMKEISDYIYEGALAFLKAEYKLLT CCCEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IFVIIASLALAGITFIPGVKTHLLIVIAFIFGALFSAYAGNIGMKIATKTNVRTTQAART HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH SLPQALKVSFGGGTVMGLGVAGLAVLGLTAFFIIFFNLFSGGVWKDTETMTVVLETLAGF CCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC SLGAESIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDVAG CCCHHHHHHHHHHCCCCEEHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHC MGADLFGSYVATVLAAMVLGNYVIKDMGGSINDAFGGIGPILLPMAIAGFGILFSIIGTT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LVKISDDNAKEAQVQKALNIGNWVSIVLTAVACFFLVQHMLPETMQMSFFGEGSKAISSM EEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH RVFYATLVGLVVGGAISSVTEYYTGLGTKPVMAIVQKSSTGAGTNVIAGLATGMISTFPT HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VLLFAVAIWISYALAGFYGVALAASAMMATTAMQLAIDAFGPISDNAGGIAEMSELPKEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RTRTDILDSVGNTTAATGKGFAIASAALTSLALFAAYVTFTGIDGINIFKAPVLAMLFVG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GMIPVVFSALAMNSVGKAAMDMVYEVRRQFKEIPGIMEGTGKPEYGKCVEISTKAALREM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHH MLPGILTIGFPIAIVLLGKLVYSDNNQLIAEMLGGYMAGVTVSGVLWAVFQNNAGGAWDN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCH AKKSFEAGVMINGEMTYKGSDAHKAAVTGDTVGDPFKDTSGPSMNILIKLTCLIGLVIAP HHHHCCCCEEECCEEEECCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ILGEGHSPSDIAGKASCCAKIEMHAGVSKCGDMSGMTKEECIKMCKEKGCSPEETAKCLA HHCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH HFDASGKYQKTDCFDTSKYEKKSVNVEVKNINGKTTGTVTKTENGKTTTEVFEGTEEEVL HCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHCCCHHHHH AKVEAAK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]