| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299241
Identifier: 146299241
GI number: 146299241
Start: 1697471
End: 1698781
Strand: Direct
Name: 146299241
Synonym: Fjoh_1481
Alternate gene names: NA
Gene position: 1697471-1698781 (Clockwise)
Preceding gene: 146299239
Following gene: 146299244
Centisome position: 27.84
GC content: 38.6
Gene sequence:
>1311_bases ATGGCTCAAACTGAAACAGTTGTTTCACCAAATGGGAAAAAAGTGCAGGTTAATCCTTATGCTAACAATGGATTGCAGGC CAATAATGGTTATGTTCAGTTAGGCGGGCCATTAGTACAGCCTTCTGTTTTAACTACTGACAGTAACTTTACACTGGGAA TAGCAGGACTAACAGCAGGTGCTGCTACAGATGATATTTTAGTATTAGATTCAAATAATATCTTAAGAAAAGTCAGCGCT TCTTCATTAACGTCAGGGTATTGGAGTTTATTAGGAAATGCGGGAACAAACTCTGCGGTTAATTTTTTAGGAACTACAGA TAACACACCTCTTGTGTTTAAAGTTAATAATCAATATGCAGGTAAACTATCTTCTACATCGACGGCTTTTGGTTACAATG CTTTAAATTCTGTTACTGCATTACAAGGTGCAGGAAATACAGCTATTGGTGTTTCTGCAATGGCTCTTACTACCAGCACT GGTATGTATAATACAGCGCTAGGAGGGAATACTTTAGCAAATAATACTACAGGTAGCAATAATATTGCAATTGGATACCA GAGTGGTAATACTATTACAACAGGCAGTAATAACATTACAATAGGGGCATCAACTACTCCAGTTGGTCCAAGTTCGGCAG CGGCAAGTAATGAGATGAATATTGGTAATACTTTGTACGGTACTGGGGTTAACAACAGTAATGCAGGAAAAATAGGGGTA AACACCAATGCGCCAACCGCAGAAATGGACGTAAACGGTTATGCCAGAGTTCGTTCAATGAATGTGGGAGATCTAACTGA TAACGTAGTAACAGCAGATGCAAATGGTAATTTGCGTCAAAGGGCAGCAATAGATGTTTCAGCAACTACATTGGGCTTTG CAAAGTTAGGTTCGGGGGTTAACTTTACTGCTTCTGGATCATATTTTTATACAGGGACTGTGCTTACTCTGGGGCCTGGT AAATGGCTGGTAACTTTAAATATGTTATTATCAAAATCATCAGGAACATTAGTTGCAACAGGTGCAACTGAAACCTGGTG GGTGCGTTCTGGTTTCAGTAACAGCTCTACTGTTTTTGCTACTAGCTCGGATATTATTTCTACTAATACACTTATAAGCG GTTTACTGCCATCTAGCAGCTATTATGCGATGCTTTATGGAACCGTAATTATTAACAATACTTCTGGAGCTAATAAAAAC TATTATTATTGGGGCGGAAATGTAGCAGCTGTTAATCCTGCTGGTACAATGTTAAATTTTGGTGGCAGCAACTGGTCTGA AGATTATGTCACATTTCAAAAAATCAATTAA
Upstream 100 bases:
>100_bases CCCTTATAAATCTAGGAGATTGAATTTTAGGAATTTGTAAAAAGATTAAGAAATGAAAAAAATTATACACATATTGCTAT TACTGCAGAGTGGGTTTATT
Downstream 100 bases:
>100_bases TAAAGGAATATCCATTAATATAAAAAGAGGCTGTCTAAATCTAGACAGCCTCTTTTTTATTTAAAAGTGAAGTAAAAAAA CTAACACAATTTTATTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MAQTETVVSPNGKKVQVNPYANNGLQANNGYVQLGGPLVQPSVLTTDSNFTLGIAGLTAGAATDDILVLDSNNILRKVSA SSLTSGYWSLLGNAGTNSAVNFLGTTDNTPLVFKVNNQYAGKLSSTSTAFGYNALNSVTALQGAGNTAIGVSAMALTTST GMYNTALGGNTLANNTTGSNNIAIGYQSGNTITTGSNNITIGASTTPVGPSSAAASNEMNIGNTLYGTGVNNSNAGKIGV NTNAPTAEMDVNGYARVRSMNVGDLTDNVVTADANGNLRQRAAIDVSATTLGFAKLGSGVNFTASGSYFYTGTVLTLGPG KWLVTLNMLLSKSSGTLVATGATETWWVRSGFSNSSTVFATSSDIISTNTLISGLLPSSSYYAMLYGTVIINNTSGANKN YYYWGGNVAAVNPAGTMLNFGGSNWSEDYVTFQKIN
Sequences:
>Translated_436_residues MAQTETVVSPNGKKVQVNPYANNGLQANNGYVQLGGPLVQPSVLTTDSNFTLGIAGLTAGAATDDILVLDSNNILRKVSA SSLTSGYWSLLGNAGTNSAVNFLGTTDNTPLVFKVNNQYAGKLSSTSTAFGYNALNSVTALQGAGNTAIGVSAMALTTST GMYNTALGGNTLANNTTGSNNIAIGYQSGNTITTGSNNITIGASTTPVGPSSAAASNEMNIGNTLYGTGVNNSNAGKIGV NTNAPTAEMDVNGYARVRSMNVGDLTDNVVTADANGNLRQRAAIDVSATTLGFAKLGSGVNFTASGSYFYTGTVLTLGPG KWLVTLNMLLSKSSGTLVATGATETWWVRSGFSNSSTVFATSSDIISTNTLISGLLPSSSYYAMLYGTVIINNTSGANKN YYYWGGNVAAVNPAGTMLNFGGSNWSEDYVTFQKIN >Mature_435_residues AQTETVVSPNGKKVQVNPYANNGLQANNGYVQLGGPLVQPSVLTTDSNFTLGIAGLTAGAATDDILVLDSNNILRKVSAS SLTSGYWSLLGNAGTNSAVNFLGTTDNTPLVFKVNNQYAGKLSSTSTAFGYNALNSVTALQGAGNTAIGVSAMALTTSTG MYNTALGGNTLANNTTGSNNIAIGYQSGNTITTGSNNITIGASTTPVGPSSAAASNEMNIGNTLYGTGVNNSNAGKIGVN TNAPTAEMDVNGYARVRSMNVGDLTDNVVTADANGNLRQRAAIDVSATTLGFAKLGSGVNFTASGSYFYTGTVLTLGPGK WLVTLNMLLSKSSGTLVATGATETWWVRSGFSNSSTVFATSSDIISTNTLISGLLPSSSYYAMLYGTVIINNTSGANKNY YYWGGNVAAVNPAGTMLNFGGSNWSEDYVTFQKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44698; Mature: 44567
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTETVVSPNGKKVQVNPYANNGLQANNGYVQLGGPLVQPSVLTTDSNFTLGIAGLTAG CCCCCEEECCCCCEEEECCCCCCCEECCCCEEEECCCEECCEEEEECCCCEEEEEEEECC AATDDILVLDSNNILRKVSASSLTSGYWSLLGNAGTNSAVNFLGTTDNTPLVFKVNNQYA CCCCCEEEECCCCCEEEECHHHHCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCC GKLSSTSTAFGYNALNSVTALQGAGNTAIGVSAMALTTSTGMYNTALGGNTLANNTTGSN CCCCCCCEECCCHHHCCEEEECCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCC NIAIGYQSGNTITTGSNNITIGASTTPVGPSSAAASNEMNIGNTLYGTGVNNSNAGKIGV EEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE NTNAPTAEMDVNGYARVRSMNVGDLTDNVVTADANGNLRQRAAIDVSATTLGFAKLGSGV CCCCCCEEEECCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEEHHEEEHHHHCCCC NFTASGSYFYTGTVLTLGPGKWLVTLNMLLSKSSGTLVATGATETWWVRSGFSNSSTVFA EEEECCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEECCCCCEEEEECCCCCCCEEEE TSSDIISTNTLISGLLPSSSYYAMLYGTVIINNTSGANKNYYYWGGNVAAVNPAGTMLNF ECCCCEECCHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEEECCEEEEECCCCEEEEC GGSNWSEDYVTFQKIN CCCCCCCCEEEEEECC >Mature Secondary Structure AQTETVVSPNGKKVQVNPYANNGLQANNGYVQLGGPLVQPSVLTTDSNFTLGIAGLTAG CCCCEEECCCCCEEEECCCCCCCEECCCCEEEECCCEECCEEEEECCCCEEEEEEEECC AATDDILVLDSNNILRKVSASSLTSGYWSLLGNAGTNSAVNFLGTTDNTPLVFKVNNQYA CCCCCEEEECCCCCEEEECHHHHCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCC GKLSSTSTAFGYNALNSVTALQGAGNTAIGVSAMALTTSTGMYNTALGGNTLANNTTGSN CCCCCCCEECCCHHHCCEEEECCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCC NIAIGYQSGNTITTGSNNITIGASTTPVGPSSAAASNEMNIGNTLYGTGVNNSNAGKIGV EEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE NTNAPTAEMDVNGYARVRSMNVGDLTDNVVTADANGNLRQRAAIDVSATTLGFAKLGSGV CCCCCCEEEECCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEEHHEEEHHHHCCCC NFTASGSYFYTGTVLTLGPGKWLVTLNMLLSKSSGTLVATGATETWWVRSGFSNSSTVFA EEEECCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEECCCCCEEEEECCCCCCCEEEE TSSDIISTNTLISGLLPSSSYYAMLYGTVIINNTSGANKNYYYWGGNVAAVNPAGTMLNF ECCCCEECCHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEEECCEEEEECCCCEEEEC GGSNWSEDYVTFQKIN CCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA