Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146298939

Identifier: 146298939

GI number: 146298939

Start: 1331497

End: 1332846

Strand: Direct

Name: 146298939

Synonym: Fjoh_1179

Alternate gene names: NA

Gene position: 1331497-1332846 (Clockwise)

Preceding gene: 146298932

Following gene: 146298946

Centisome position: 21.84

GC content: 34.74

Gene sequence:

>1350_bases
ATGAAAAAATTTCTCAAAGTACTTTTGCTTGTTGTGGTTCTTGCTTTTTTATATTTTGGATTTACGACTTATCCAAAGCT
TGATTTAATTTCAGGTTTCTCTGCCAAAAGTGTTGCGTCTGGGCATTTTATAGATAATCGCCCGTTGGATTTAATTCAGA
AAACCGACAATGATATCAATTTGGTTGACTTGGCTAAAAACTCAATTGATGATGCTGGAAAATATGCCATTTCTTCTGTT
TATGGGTTAAAAGAAAGAAAAGCGATTTATCGTGAAGGATTAGGAGCGACTTTGATTAATGATGATTTTGATGTTTCAAA
ACCGTATCTGCTTCCAAAAAGAACGAAATTAGAAAACAATCTTCCTTTTCCTTATGGAGATAATGAACCAAAAGATACTT
CATTTTCTAATGTTGACTATTCGAAACTAAAAAAAGCAGTTGATAATGCTTTTGACAAAACAGGTGGAAGAATTAAAAGA
ACTCGCGCTGTTGTAGTTTTATATAAAGATAAATTGATTGCCGAAAAATACGATACAGGTTTTAATAAAGATAGTAAAAT
TCTGGGTTGGTCAATGACAAAAAGTATCACAAGTTCAGCTTTCGGAGTTTTGGCGAAACAAGGGAAAATTGATATTTATA
AACCTGCTCCAGTTGTAGAATGGAAAAATGATGAGCGTAAAAATATTACGCTTAACGATTTACTTCATATGAATTCTGGT
TTAGAATGGGAAGAAAATTATAGCACAATCTGCGACGCAACAAAAATGCTTTTTCAGGCCGAAGATATGGGTAAAGTGCA
ATTGGATAAACCAGCACAATTTAAACCCAACACACATTGGAATTATTCGTCGGGAACAACCAATTTATTATCCCTGATTT
TAAGAAGACAGTTTAAAACCCAACAAGAATATCTTGATTTTTGGTACAGCGCTGTAATCGATAAAATCGGAATGAACTCG
ATGATTGTGGAACAAGATATGTCGGGAACTTTTGTAGGTTCGTCTTACGGGTGGGCAACACCAAGAGACTGGTCAAAATT
TGGATTGTTATATCTTCATAAAGGAAACTGGAATGGCGAACAAATTCTTGACGAAAGTTGGGTAAAATATACTGCAACTC
CAACAAATACTTCTGATGGAAAATATGGGGCGCAATTTTGGTTAAACGCTGGAGGGAAATTTCCAGATGTTCCTAGAGAT
ATGTTTTATTGCAGTGGTTATCAAGGTCAAATGGTGGCGATTATTCCGTCAAAAGATATGGTAATCGTGAGAATGGGAGT
AAGAGAAGAAGAACCGGGATTTGATTTTAATGGGTTTTTGAAAGAAGTGATTGCTTCTATTGGGAAATAG

Upstream 100 bases:

>100_bases
ATCAATTCTGTTTTCTGAATTATCCGAAACAGATTTATAATTTGGGTTCTAAAATCGTGAACATAAATTATTTATATTGC
ATTAAAAATAACTAACTATC

Downstream 100 bases:

>100_bases
GTTTAACCGCAATCCCGATAGCTATCGGGATTGCGGTTAAGAATATCTACAAATCAAATCCTAAATTCACGCCCAATTTC
GTAGCAATGATTTTAGTAAT

Product: beta-lactamase

Products: NA

Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolase Transmembrane Protein; Beta-Lactamase Family Protein; Beta-Lactamase Class C; Beta-Lactamase Class C Family Protein; Hydrolase; Beta-Lactamase Class C Protein; Secreted Beta-Lactamase Family Protein; Amide Hydrolase; Hydrolatse Transmembrane Protein; Membrane Or Secreted Beta-Lactamase Family Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDINLVDLAKNSIDDAGKYAISSV
YGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENNLPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKR
TRAVVVLYKDKLIAEKYDTGFNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG
LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKTQQEYLDFWYSAVIDKIGMNS
MIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGEQILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRD
MFYCSGYQGQMVAIIPSKDMVIVRMGVREEEPGFDFNGFLKEVIASIGK

Sequences:

>Translated_449_residues
MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDINLVDLAKNSIDDAGKYAISSV
YGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENNLPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKR
TRAVVVLYKDKLIAEKYDTGFNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG
LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKTQQEYLDFWYSAVIDKIGMNS
MIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGEQILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRD
MFYCSGYQGQMVAIIPSKDMVIVRMGVREEEPGFDFNGFLKEVIASIGK
>Mature_449_residues
MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDINLVDLAKNSIDDAGKYAISSV
YGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENNLPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKR
TRAVVVLYKDKLIAEKYDTGFNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG
LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKTQQEYLDFWYSAVIDKIGMNS
MIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGEQILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRD
MFYCSGYQGQMVAIIPSKDMVIVRMGVREEEPGFDFNGFLKEVIASIGK

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50834; Mature: 50834

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDIN
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCCCE
LVDLAKNSIDDAGKYAISSVYGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENN
EEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHCCC
LPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKRTRAVVVLYKDKLIAEKYDTG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHCCC
FNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG
CCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHCCC
LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKT
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QQEYLDFWYSAVIDKIGMNSMIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGE
HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCHH
QILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRDMFYCSGYQGQMVAIIPSKDM
HHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHEEECCCCCCEEEEECCCCE
VIVRMGVREEEPGFDFNGFLKEVIASIGK
EEEEECCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKFLKVLLLVVVLAFLYFGFTTYPKLDLISGFSAKSVASGHFIDNRPLDLIQKTDNDIN
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCCCE
LVDLAKNSIDDAGKYAISSVYGLKERKAIYREGLGATLINDDFDVSKPYLLPKRTKLENN
EEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHCCC
LPFPYGDNEPKDTSFSNVDYSKLKKAVDNAFDKTGGRIKRTRAVVVLYKDKLIAEKYDTG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHCCC
FNKDSKILGWSMTKSITSSAFGVLAKQGKIDIYKPAPVVEWKNDERKNITLNDLLHMNSG
CCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHCCC
LEWEENYSTICDATKMLFQAEDMGKVQLDKPAQFKPNTHWNYSSGTTNLLSLILRRQFKT
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QQEYLDFWYSAVIDKIGMNSMIVEQDMSGTFVGSSYGWATPRDWSKFGLLYLHKGNWNGE
HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCHH
QILDESWVKYTATPTNTSDGKYGAQFWLNAGGKFPDVPRDMFYCSGYQGQMVAIIPSKDM
HHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHEEECCCCCCEEEEECCCCE
VIVRMGVREEEPGFDFNGFLKEVIASIGK
EEEEECCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA