| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298931
Identifier: 146298931
GI number: 146298931
Start: 1323991
End: 1324848
Strand: Direct
Name: 146298931
Synonym: Fjoh_1170
Alternate gene names: NA
Gene position: 1323991-1324848 (Clockwise)
Preceding gene: 146298930
Following gene: 146298932
Centisome position: 21.72
GC content: 29.95
Gene sequence:
>858_bases ATGAAAACCTACTTTATTGCCATCTTAATGATGGTGTTTCCATTCTTGATCCATAGTCAGGACAACGTTAGACTAAAACA GATCAACATTGTAAAAACAAATTACCAAAACTCTAAAGACGGCGAGATTGTTAATAAAACAATGGTTTTTAAAGATGGTA AACTTCAAACGATTACAACTTCAGATGTTGTACAGCATTTCTATTACAACAAAAACGGCCTGTTGGATATGACAGTAAAA GACAAAGTAGGAAGTGACTGGAAAGAAGTAATCAATTATACTTACGATGCTGATAACAATATTATCAAGTTTGTAAAAAA ATATCAGGAAGGGCCAAACTATATTACAAAAGTGGTTTCATTCGTTTATGAAGGAGCAAGAGTAAAAGTAACAACCAAAA AGAGTACAAACCACCAGAATTTAGTTGATGATATTGAATATCTGGTTGAAAACGGAATTATTGTAAGACGTACTTCACGC GATAGAAATAAAGCAATTATTGGAAAATTAGAATACGTTTATGTAAATGATAATGTATCTAAACATAAAGGATTGGTTGG AGACAAAATATCTAAATCATATACTTATGATGATAAAAAATCAGTAGATCAATTAATTGTTCAAAGTCTTTTTGGAGATA ATTATAAAGTAATTGTTCCAATGATCTCATATCATGAAGATGAATTTGCCTTTGAATCGATTTCATATAATAATGAAGTA AATTTCAGCCCTTCGTCTGCAGCTTTGGTAGCAGTAAGCAGAAAATACAAATACAACAAATTGAATTTCCCAATTTCTTG TTCACAAATTGAAGAAAACGGAATCGTTAAAACAGAAAAAACATTTATTTACGAATAA
Upstream 100 bases:
>100_bases TTAGTTTTATAAAGATGTTTTTTTGTTTTTTTAAACTTATAATTGTTGATTTCTGACAGAATTTTGTATTTTGGTCATCC CAAATCAATACAAAAACAAC
Downstream 100 bases:
>100_bases CACTGTTTTTAAATTATACTTTAAACCATTTATAAGTCAAGTTAATGCCTGATTTGTAAATGGTTTATTTTTTTATAGAA TTTAAAATTGAAATTCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKTYFIAILMMVFPFLIHSQDNVRLKQINIVKTNYQNSKDGEIVNKTMVFKDGKLQTITTSDVVQHFYYNKNGLLDMTVK DKVGSDWKEVINYTYDADNNIIKFVKKYQEGPNYITKVVSFVYEGARVKVTTKKSTNHQNLVDDIEYLVENGIIVRRTSR DRNKAIIGKLEYVYVNDNVSKHKGLVGDKISKSYTYDDKKSVDQLIVQSLFGDNYKVIVPMISYHEDEFAFESISYNNEV NFSPSSAALVAVSRKYKYNKLNFPISCSQIEENGIVKTEKTFIYE
Sequences:
>Translated_285_residues MKTYFIAILMMVFPFLIHSQDNVRLKQINIVKTNYQNSKDGEIVNKTMVFKDGKLQTITTSDVVQHFYYNKNGLLDMTVK DKVGSDWKEVINYTYDADNNIIKFVKKYQEGPNYITKVVSFVYEGARVKVTTKKSTNHQNLVDDIEYLVENGIIVRRTSR DRNKAIIGKLEYVYVNDNVSKHKGLVGDKISKSYTYDDKKSVDQLIVQSLFGDNYKVIVPMISYHEDEFAFESISYNNEV NFSPSSAALVAVSRKYKYNKLNFPISCSQIEENGIVKTEKTFIYE >Mature_285_residues MKTYFIAILMMVFPFLIHSQDNVRLKQINIVKTNYQNSKDGEIVNKTMVFKDGKLQTITTSDVVQHFYYNKNGLLDMTVK DKVGSDWKEVINYTYDADNNIIKFVKKYQEGPNYITKVVSFVYEGARVKVTTKKSTNHQNLVDDIEYLVENGIIVRRTSR DRNKAIIGKLEYVYVNDNVSKHKGLVGDKISKSYTYDDKKSVDQLIVQSLFGDNYKVIVPMISYHEDEFAFESISYNNEV NFSPSSAALVAVSRKYKYNKLNFPISCSQIEENGIVKTEKTFIYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32967; Mature: 32967
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYFIAILMMVFPFLIHSQDNVRLKQINIVKTNYQNSKDGEIVNKTMVFKDGKLQTITT CHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEEH SDVVQHFYYNKNGLLDMTVKDKVGSDWKEVINYTYDADNNIIKFVKKYQEGPNYITKVVS HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCEEECCCCHHHHHHHHHHCCHHHHHHHHH FVYEGARVKVTTKKSTNHQNLVDDIEYLVENGIIVRRTSRDRNKAIIGKLEYVYVNDNVS HHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEECCCCH KHKGLVGDKISKSYTYDDKKSVDQLIVQSLFGDNYKVIVPMISYHEDEFAFESISYNNEV HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCC NFSPSSAALVAVSRKYKYNKLNFPISCSQIEENGIVKTEKTFIYE CCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCEEECCEEECC >Mature Secondary Structure MKTYFIAILMMVFPFLIHSQDNVRLKQINIVKTNYQNSKDGEIVNKTMVFKDGKLQTITT CHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEEH SDVVQHFYYNKNGLLDMTVKDKVGSDWKEVINYTYDADNNIIKFVKKYQEGPNYITKVVS HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCEEECCCCHHHHHHHHHHCCHHHHHHHHH FVYEGARVKVTTKKSTNHQNLVDDIEYLVENGIIVRRTSRDRNKAIIGKLEYVYVNDNVS HHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEECCCCH KHKGLVGDKISKSYTYDDKKSVDQLIVQSLFGDNYKVIVPMISYHEDEFAFESISYNNEV HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCC NFSPSSAALVAVSRKYKYNKLNFPISCSQIEENGIVKTEKTFIYE CCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA