| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298930
Identifier: 146298930
GI number: 146298930
Start: 1322515
End: 1323864
Strand: Direct
Name: 146298930
Synonym: Fjoh_1169
Alternate gene names: NA
Gene position: 1322515-1323864 (Clockwise)
Preceding gene: 146298929
Following gene: 146298931
Centisome position: 21.69
GC content: 32.37
Gene sequence:
>1350_bases ATGAAAAACATCGTTTTAAATTTATTTTTTGGAATAGCATTATTGTCTGTCTGCAGCTGTAATAATGAAATAGAAACACC AGTATTAGGCTGTACGCAGCCGGATTTTAAAGTCAATAAAACAGTTGAAAAGGTTTATGAACTTTCGGCAAATACAGCAA AACAATATTTATATGATGACATAATTGAAGCCTACGTTGTTTCAAGTGATGAAGGAGGGAATTTTTTCAAAAGCATATCA CTTCAGACAAAAGCCTCAGCAAATAATCCTGCAATTGGTTTTAGTGTTCCTGTAGATGCTTCAAATACATATATTGATTA TCGAGTTGGGAATAAAGTATATGTGAAACTTAAAAATCAATTCACAGATTTGTATTATGGTGGATTAAGAATTGGAAGTT TATATGTGAGTAATGCGGGTGATCCAACAGTAGGAAGGATTTCTCAAAATGAATACAAGAATGTTTTAAATGCATCATGT ACAATCATTGATGAAAATGAATTATTACAATCTCTTTCTGTAGAAGAAGCACTTTCAGATAATAAATTAAATACTCTAAT AGAACTTAATAATGTTGAATTTACCGAAGCAGCATTGGGACGTCATTATTTTGAAGAATCAAATAATGTAGGAGGATCAA CAAATTGGTATTTGAGAGATAAAACAGGAAATCAAATTATTTTTAGAACCAGCAGTTATGCAAAATTTGCAGATCATTTT GTTCCTGAAGGAAGCGGAAAAGTAAAAGGAATTCTAACAAAATTTGGTACTGATTATCAATTTATGGTGCGATATGAAAG TGATATTGTAATGAATGGAAAAAGAAATATTCCGTTTTTTGCAGAAGACTTCCAATCGGTTAAAAACAATGTGAATTTTG CTTTGCCGGGATGGAGCAACATTGTAGAAAAAGCATCAAAATTATGGAAAAGCATGGTATATGCCGGAAATGGTTATGCC GAATTTAATACAACAAGTACAACAGCTGCAGAAAATATTGCCTGGTTGGTTTCTCCTAAAATTAATTTAACAGGTTACAA AAATGCGGTGCTTTCTTTTAGAAGTGCTCAGCACGATTTAAAAGTAGATTCTCCATTAAATACGCTGGAAGTATACGTGT CAACAAATTTTGACGGTTCGAGTGTAACGAAAGCAAAATGGACAAAACTTGAAGCAAAAGTTCCAACGCTTTCAAATCCT TCTCGTGAATTTATGAGTTCTGGCGGAATAGATTTATCGGCCTATTCAGGAAATATAAATATTGCTTTTCGATATGTAGG TTCAGGGAAAGATAAAACACTAAATGGGGCTTTTATGGTTGATGATATAAAGATTTTTGGCGAGAAATAA
Upstream 100 bases:
>100_bases AGCGGAACACCTTCATTTGGACCCAAATATTATTACGGTTACGGAAGAACTTATTTTTTAAATCTTACTATCGGTTTATA AACCGAAATTTTAATTTGTT
Downstream 100 bases:
>100_bases GTGTCGCGTTTTTAAGTGTTTGATTTTTAGTTTTATAAAGATGTTTTTTTGTTTTTTTAAACTTATAATTGTTGATTTCT GACAGAATTTTGTATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKNIVLNLFFGIALLSVCSCNNEIETPVLGCTQPDFKVNKTVEKVYELSANTAKQYLYDDIIEAYVVSSDEGGNFFKSIS LQTKASANNPAIGFSVPVDASNTYIDYRVGNKVYVKLKNQFTDLYYGGLRIGSLYVSNAGDPTVGRISQNEYKNVLNASC TIIDENELLQSLSVEEALSDNKLNTLIELNNVEFTEAALGRHYFEESNNVGGSTNWYLRDKTGNQIIFRTSSYAKFADHF VPEGSGKVKGILTKFGTDYQFMVRYESDIVMNGKRNIPFFAEDFQSVKNNVNFALPGWSNIVEKASKLWKSMVYAGNGYA EFNTTSTTAAENIAWLVSPKINLTGYKNAVLSFRSAQHDLKVDSPLNTLEVYVSTNFDGSSVTKAKWTKLEAKVPTLSNP SREFMSSGGIDLSAYSGNINIAFRYVGSGKDKTLNGAFMVDDIKIFGEK
Sequences:
>Translated_449_residues MKNIVLNLFFGIALLSVCSCNNEIETPVLGCTQPDFKVNKTVEKVYELSANTAKQYLYDDIIEAYVVSSDEGGNFFKSIS LQTKASANNPAIGFSVPVDASNTYIDYRVGNKVYVKLKNQFTDLYYGGLRIGSLYVSNAGDPTVGRISQNEYKNVLNASC TIIDENELLQSLSVEEALSDNKLNTLIELNNVEFTEAALGRHYFEESNNVGGSTNWYLRDKTGNQIIFRTSSYAKFADHF VPEGSGKVKGILTKFGTDYQFMVRYESDIVMNGKRNIPFFAEDFQSVKNNVNFALPGWSNIVEKASKLWKSMVYAGNGYA EFNTTSTTAAENIAWLVSPKINLTGYKNAVLSFRSAQHDLKVDSPLNTLEVYVSTNFDGSSVTKAKWTKLEAKVPTLSNP SREFMSSGGIDLSAYSGNINIAFRYVGSGKDKTLNGAFMVDDIKIFGEK >Mature_449_residues MKNIVLNLFFGIALLSVCSCNNEIETPVLGCTQPDFKVNKTVEKVYELSANTAKQYLYDDIIEAYVVSSDEGGNFFKSIS LQTKASANNPAIGFSVPVDASNTYIDYRVGNKVYVKLKNQFTDLYYGGLRIGSLYVSNAGDPTVGRISQNEYKNVLNASC TIIDENELLQSLSVEEALSDNKLNTLIELNNVEFTEAALGRHYFEESNNVGGSTNWYLRDKTGNQIIFRTSSYAKFADHF VPEGSGKVKGILTKFGTDYQFMVRYESDIVMNGKRNIPFFAEDFQSVKNNVNFALPGWSNIVEKASKLWKSMVYAGNGYA EFNTTSTTAAENIAWLVSPKINLTGYKNAVLSFRSAQHDLKVDSPLNTLEVYVSTNFDGSSVTKAKWTKLEAKVPTLSNP SREFMSSGGIDLSAYSGNINIAFRYVGSGKDKTLNGAFMVDDIKIFGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49722; Mature: 49722
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIVLNLFFGIALLSVCSCNNEIETPVLGCTQPDFKVNKTVEKVYELSANTAKQYLYDD CCCEEHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH IIEAYVVSSDEGGNFFKSISLQTKASANNPAIGFSVPVDASNTYIDYRVGNKVYVKLKNQ HHHHEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCEEEEEEECC FTDLYYGGLRIGSLYVSNAGDPTVGRISQNEYKNVLNASCTIIDENELLQSLSVEEALSD CCEEEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHCC NKLNTLIELNNVEFTEAALGRHYFEESNNVGGSTNWYLRDKTGNQIIFRTSSYAKFADHF CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHC VPEGSGKVKGILTKFGTDYQFMVRYESDIVMNGKRNIPFFAEDFQSVKNNVNFALPGWSN CCCCCCCEEEEHHHCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHCCCCEECCCHHH IVEKASKLWKSMVYAGNGYAEFNTTSTTAAENIAWLVSPKINLTGYKNAVLSFRSAQHDL HHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCEEEEECCCEEECCCHHHHHHHHCCCCCC KVDSPLNTLEVYVSTNFDGSSVTKAKWTKLEAKVPTLSNPSREFMSSGGIDLSAYSGNIN CCCCCCCEEEEEEEECCCCCCCCHHHEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCEE IAFRYVGSGKDKTLNGAFMVDDIKIFGEK EEEEEECCCCCCEECCEEEEEEEEEECCC >Mature Secondary Structure MKNIVLNLFFGIALLSVCSCNNEIETPVLGCTQPDFKVNKTVEKVYELSANTAKQYLYDD CCCEEHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH IIEAYVVSSDEGGNFFKSISLQTKASANNPAIGFSVPVDASNTYIDYRVGNKVYVKLKNQ HHHHEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCEEEEEEECC FTDLYYGGLRIGSLYVSNAGDPTVGRISQNEYKNVLNASCTIIDENELLQSLSVEEALSD CCEEEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHCC NKLNTLIELNNVEFTEAALGRHYFEESNNVGGSTNWYLRDKTGNQIIFRTSSYAKFADHF CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHC VPEGSGKVKGILTKFGTDYQFMVRYESDIVMNGKRNIPFFAEDFQSVKNNVNFALPGWSN CCCCCCCEEEEHHHCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHCCCCEECCCHHH IVEKASKLWKSMVYAGNGYAEFNTTSTTAAENIAWLVSPKINLTGYKNAVLSFRSAQHDL HHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCEEEEECCCEEECCCHHHHHHHHCCCCCC KVDSPLNTLEVYVSTNFDGSSVTKAKWTKLEAKVPTLSNPSREFMSSGGIDLSAYSGNIN CCCCCCCEEEEEEEECCCCCCCCHHHEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCEE IAFRYVGSGKDKTLNGAFMVDDIKIFGEK EEEEEECCCCCCEECCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA