Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146298908

Identifier: 146298908

GI number: 146298908

Start: 1295813

End: 1297006

Strand: Direct

Name: 146298908

Synonym: Fjoh_1147

Alternate gene names: NA

Gene position: 1295813-1297006 (Clockwise)

Preceding gene: 146298907

Following gene: 146298909

Centisome position: 21.25

GC content: 30.32

Gene sequence:

>1194_bases
ATGCAGGATATAGTACTTTCGCTTTTCTTTTTTATAGCTACAATCGTTGGATTTGCTACTTCATTTATGGTTCTTTTTTC
AAAGAAAAACTATACTAAGAGTTTTTTCTTAGGACTATTTTTGTTTAGCCTTGCAGTCGTAAGTATTTACAATTTTTATT
TGTCGGCACACGATTTTAAAGATTTCCCAGATCTTATCATGATCACAAAATCGTTTATATTTCTTGTTGCCCCGTGCGCA
TTTTTGTACGTTCGGAGTGTGTTGTTTCCCTATTCTGCTTTTAAAAATTACGACTGGCTTCATTTCCTGCCATTATTAAT
TTATTTCTCGCTTACAATTGTTGTTTGGATTGGAAACTTCACAAACTTTTATTCTGTTGAATACCTTTCTGTAAAAATAA
AAAGTCCGTTTTCTATATTCAGCCTGAGTGTGTGGCTTTTATATGCTTTTTGCCAGACCATGATGATTTTAAATTATGAT
TTAAAAAAGTTCAAGGAAAATCATTTTCAAAAAATAAAAATTTTAAACTGGATCAGAGTTTATAATTTAATGATTCTGTT
TTTGTTTTCTACACTTTTTGTCCACTTCTTTTTAATGAACAAAGTCGACCGCATAGATTATTCCTGTTATGTTTTGATTT
CGTCGGTGCTCCTTTTTACGGTATGCTGGCTTTATTTTAAACCGCAGATATTTTATGATCCGCATGAAATTGATGAGTTT
AAAATTATAGAAGAAAACTTAGAAATTTTTACATCGAAAGAAACTAAAAATTCACTCCCGATGGTCAAAGAATTAACTCC
TGAAAAAAAAGAATTATACCTGTCTAAACTAGAGAGCATATTTGATTCAAAAAAACTCTTTTTAAAGAAAGATCTCGTGA
TTCGCGACATTTCAGAAGAAACCGGAATTACCGTAAATAATCTTTCTAATTTAATTAATTCAGAATTTAATTTACATTTT
CAGGATTATATAAATCTAAAGCGAATCGAATATTTTAAAGAAAAAATAAACGATGCAGACTGGAAAGATTTATCACTCGA
AGGAATGGCATGGGCTTCTGGTTTTAAATCCAGAACAACCTGTTTTAGAGCTTTTATAAAACATACCGGAAAATCTCCTT
CAGAATACTTCAAAATAATCAGGATTAGTCCTGAAAAAACAAATTCCTACTTCCTTAAACAATCTACAAACTGA

Upstream 100 bases:

>100_bases
TTCTCAAACAAGAAAAAGTGCAGCATTTATAAAAACACCTTATTTTCTTTTGATTTCTTCAAAAGAACAGGATATCTATT
TATAATTTAAGATCAAAATT

Downstream 100 bases:

>100_bases
AAATAGTTTGTTAAGACTGGTTTTGAAGTGTAATTAATTTTAAAACAGAAACCATGAAAGCGATAATAAAGCAAAGACAA
AACCTAAAATCTATATTCCT

Product: response regulator receiver protein

Products: NA

Alternate protein names: Regulatory Helix-Turn-Helix Protein AraC Family; Transcriptional Regulator Arac Family; Response Regulator Receiver Protein

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MQDIVLSLFFFIATIVGFATSFMVLFSKKNYTKSFFLGLFLFSLAVVSIYNFYLSAHDFKDFPDLIMITKSFIFLVAPCA
FLYVRSVLFPYSAFKNYDWLHFLPLLIYFSLTIVVWIGNFTNFYSVEYLSVKIKSPFSIFSLSVWLLYAFCQTMMILNYD
LKKFKENHFQKIKILNWIRVYNLMILFLFSTLFVHFFLMNKVDRIDYSCYVLISSVLLFTVCWLYFKPQIFYDPHEIDEF
KIIEENLEIFTSKETKNSLPMVKELTPEKKELYLSKLESIFDSKKLFLKKDLVIRDISEETGITVNNLSNLINSEFNLHF
QDYINLKRIEYFKEKINDADWKDLSLEGMAWASGFKSRTTCFRAFIKHTGKSPSEYFKIIRISPEKTNSYFLKQSTN

Sequences:

>Translated_397_residues
MQDIVLSLFFFIATIVGFATSFMVLFSKKNYTKSFFLGLFLFSLAVVSIYNFYLSAHDFKDFPDLIMITKSFIFLVAPCA
FLYVRSVLFPYSAFKNYDWLHFLPLLIYFSLTIVVWIGNFTNFYSVEYLSVKIKSPFSIFSLSVWLLYAFCQTMMILNYD
LKKFKENHFQKIKILNWIRVYNLMILFLFSTLFVHFFLMNKVDRIDYSCYVLISSVLLFTVCWLYFKPQIFYDPHEIDEF
KIIEENLEIFTSKETKNSLPMVKELTPEKKELYLSKLESIFDSKKLFLKKDLVIRDISEETGITVNNLSNLINSEFNLHF
QDYINLKRIEYFKEKINDADWKDLSLEGMAWASGFKSRTTCFRAFIKHTGKSPSEYFKIIRISPEKTNSYFLKQSTN
>Mature_397_residues
MQDIVLSLFFFIATIVGFATSFMVLFSKKNYTKSFFLGLFLFSLAVVSIYNFYLSAHDFKDFPDLIMITKSFIFLVAPCA
FLYVRSVLFPYSAFKNYDWLHFLPLLIYFSLTIVVWIGNFTNFYSVEYLSVKIKSPFSIFSLSVWLLYAFCQTMMILNYD
LKKFKENHFQKIKILNWIRVYNLMILFLFSTLFVHFFLMNKVDRIDYSCYVLISSVLLFTVCWLYFKPQIFYDPHEIDEF
KIIEENLEIFTSKETKNSLPMVKELTPEKKELYLSKLESIFDSKKLFLKKDLVIRDISEETGITVNNLSNLINSEFNLHF
QDYINLKRIEYFKEKINDADWKDLSLEGMAWASGFKSRTTCFRAFIKHTGKSPSEYFKIIRISPEKTNSYFLKQSTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47153; Mature: 47153

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCHHHHEEEEEECCCCCCCEEEEECCC
>Mature Secondary Structure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HHHHHHHHCCCCHHHHEEEEEECCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA