| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298901
Identifier: 146298901
GI number: 146298901
Start: 1287284
End: 1287772
Strand: Direct
Name: 146298901
Synonym: Fjoh_1140
Alternate gene names: NA
Gene position: 1287284-1287772 (Clockwise)
Preceding gene: 146298900
Following gene: 146298902
Centisome position: 21.11
GC content: 28.63
Gene sequence:
>489_bases ATGGCTATTCATAGATTGGATTTAGATGAATTTGACGAAATTGATTATTATTTAATGGCAATTCATACTTCATTAGAAGA TTATAGATTGGCCTATTTTATCAATAAGAACCTTCCGATTAACTTAAGTAAGAGCAAAAACGAGATCCATGCTCAGACTA AAGAAGGTGAGGCAAATTTTTCGAGATTTTATTATTATGATTCTGAGAAAGCTGTATCATGGAATTTGATTCAGAATAAA AATGAGATCATTTCTGTGAGTACAAATGATTTCCAGAATTTGTTTTCTAATGAAACAAGTGAGGTTTCTACAACAATTCA TTTACTTCCTGAATTCAAAAAAGTAGATTTTTTCCTGAAAATCGATAACAGCGAAGAGGCTGTTGATTTTTCAGAAATTC AGCAAAAACTAAATTCAATAGAAAGTATCGCAGCAATATATGCTGTAGATACCAATAAAATAAAATCAAAAAACAATCTA ATTTTTTAA
Upstream 100 bases:
>100_bases ACGCTAAATCGTTTTCGTTTATAAATTAATAAAAACAAGCTGCTTATAACTATTGATGCTCCGTTAGAAATAGTATATTT ACAACTTGATTTTTCATGAC
Downstream 100 bases:
>100_bases AAAAAATGTTAACAAATAAGAAAACCAAAATTGTTGCTACACTTGGGCCTGCCTGTAGTACAAGAGAGATCATTAAAGAT ATGATTGATGCAGGGGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAIHRLDLDEFDEIDYYLMAIHTSLEDYRLAYFINKNLPINLSKSKNEIHAQTKEGEANFSRFYYYDSEKAVSWNLIQNK NEIISVSTNDFQNLFSNETSEVSTTIHLLPEFKKVDFFLKIDNSEEAVDFSEIQQKLNSIESIAAIYAVDTNKIKSKNNL IF
Sequences:
>Translated_162_residues MAIHRLDLDEFDEIDYYLMAIHTSLEDYRLAYFINKNLPINLSKSKNEIHAQTKEGEANFSRFYYYDSEKAVSWNLIQNK NEIISVSTNDFQNLFSNETSEVSTTIHLLPEFKKVDFFLKIDNSEEAVDFSEIQQKLNSIESIAAIYAVDTNKIKSKNNL IF >Mature_161_residues AIHRLDLDEFDEIDYYLMAIHTSLEDYRLAYFINKNLPINLSKSKNEIHAQTKEGEANFSRFYYYDSEKAVSWNLIQNKN EIISVSTNDFQNLFSNETSEVSTTIHLLPEFKKVDFFLKIDNSEEAVDFSEIQQKLNSIESIAAIYAVDTNKIKSKNNLI F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18909; Mature: 18778
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHRLDLDEFDEIDYYLMAIHTSLEDYRLAYFINKNLPINLSKSKNEIHAQTKEGEANF CCEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCEEEECCCCCCCE SRFYYYDSEKAVSWNLIQNKNEIISVSTNDFQNLFSNETSEVSTTIHLLPEFKKVDFFLK EEEEEECCCCEEEEEEECCCCCEEEEECHHHHHHHCCCCCHHEEEEEECCCCCEEEEEEE IDNSEEAVDFSEIQQKLNSIESIAAIYAVDTNKIKSKNNLIF ECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC >Mature Secondary Structure AIHRLDLDEFDEIDYYLMAIHTSLEDYRLAYFINKNLPINLSKSKNEIHAQTKEGEANF CEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCEEEECCCCCCCE SRFYYYDSEKAVSWNLIQNKNEIISVSTNDFQNLFSNETSEVSTTIHLLPEFKKVDFFLK EEEEEECCCCEEEEEEECCCCCEEEEECHHHHHHHCCCCCHHEEEEEECCCCCEEEEEEE IDNSEEAVDFSEIQQKLNSIESIAAIYAVDTNKIKSKNNLIF ECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA