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The map label for this gene is atpH

Identifier: 146298819

GI number: 146298819

Start: 1201004

End: 1201537

Strand: Direct

Name: atpH

Synonym: Fjoh_1058

Alternate gene names: 146298819

Gene position: 1201004-1201537 (Clockwise)

Preceding gene: 146298818

Following gene: 146298820

Centisome position: 19.7

GC content: 31.09

Gene sequence:

>534_bases
ATGGCAAGTACAAGAGCAGCAATTCGTTATGCAAAAGCAATTCTAGACTTAGCAAACTCTAAAGGTGTTGCCGAAGCTGT
CAATAACGATATGAAATCAATTGCATCAGCAATTGAGACTAATACAGAATTGAGTACATTTATTCAAAACCCAACAACTA
CTGTTGAAGTTAAAGAAAGTGCTCTTTTAGAAGTTTTCGCAGATGTAAATGGAGTAACAAAAGGATTATTTCATTTATTA
TTTGAAAACAAAAGATTTGAAATTCTAGATGCAATTGCAGTAGAATACAATAAATTATTTGATGAAAGCAATGGCGTTGA
AGTAGCAAAAGTTACTACAGCAATTCCTATGGATGCTGCATTAGAAGCTAAAGTTTTAGCTAAAGTTGCAACATTATCAG
ATAAGAAAATTACAATTGAAAATGTAGTAGATCCTTCAATCATTGGCGGATTTATTTTAAGAATAGGTGATAATCAATAC
AATGCTTCTGTTGCAAACAGATTACAAGTATTAAAAAGAGAGTTAAGTAATTAG

Upstream 100 bases:

>100_bases
AGCATCGCTGAAAAATTATTGAAAGAAGAATTATCTAACAAAGAATCTCAAACTAAATTAGTTGAGAAAATGTTAGGTGA
CGTAAAGTTAAACTAAGATT

Downstream 100 bases:

>100_bases
TTTTATAACACAAAAAGTGTCTAAATTATAAATTAAGATGGCGGAAATCAAACCTGCTGAAATTTCAGCAATATTAAGAA
AGCAAGTAGAAGGTTTTGAA

Product: ATP synthase F1 subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MASTRAAIRYAKAILDLANSKGVAEAVNNDMKSIASAIETNTELSTFIQNPTTTVEVKESALLEVFADVNGVTKGLFHLL
FENKRFEILDAIAVEYNKLFDESNGVEVAKVTTAIPMDAALEAKVLAKVATLSDKKITIENVVDPSIIGGFILRIGDNQY
NASVANRLQVLKRELSN

Sequences:

>Translated_177_residues
MASTRAAIRYAKAILDLANSKGVAEAVNNDMKSIASAIETNTELSTFIQNPTTTVEVKESALLEVFADVNGVTKGLFHLL
FENKRFEILDAIAVEYNKLFDESNGVEVAKVTTAIPMDAALEAKVLAKVATLSDKKITIENVVDPSIIGGFILRIGDNQY
NASVANRLQVLKRELSN
>Mature_176_residues
ASTRAAIRYAKAILDLANSKGVAEAVNNDMKSIASAIETNTELSTFIQNPTTTVEVKESALLEVFADVNGVTKGLFHLLF
ENKRFEILDAIAVEYNKLFDESNGVEVAKVTTAIPMDAALEAKVLAKVATLSDKKITIENVVDPSIIGGFILRIGDNQYN
ASVANRLQVLKRELSN

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=174, Percent_Identity=25.8620689655172, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71984717, Length=174, Percent_Identity=25.8620689655172, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320504, Length=175, Percent_Identity=27.4285714285714, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24647054, Length=166, Percent_Identity=27.710843373494, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_FLAJ1 (A5FL33)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001193410.1
- ProteinModelPortal:   A5FL33
- SMR:   A5FL33
- STRING:   A5FL33
- GeneID:   5091788
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_1058
- eggNOG:   COG0712
- HOGENOM:   HBG477727
- OMA:   MSTNAIA
- ProtClustDB:   CLSK851837
- BioCyc:   FJOH376686:FJOH_1058-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19187; Mature: 19056

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTRAAIRYAKAILDLANSKGVAEAVNNDMKSIASAIETNTELSTFIQNPTTTVEVKES
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEHHH
ALLEVFADVNGVTKGLFHLLFENKRFEILDAIAVEYNKLFDESNGVEVAKVTTAIPMDAA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH
LEAKVLAKVATLSDKKITIENVVDPSIIGGFILRIGDNQYNASVANRLQVLKRELSN
HHHHHHHHHHHCCCCEEEHHHCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASTRAAIRYAKAILDLANSKGVAEAVNNDMKSIASAIETNTELSTFIQNPTTTVEVKES
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEHHH
ALLEVFADVNGVTKGLFHLLFENKRFEILDAIAVEYNKLFDESNGVEVAKVTTAIPMDAA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH
LEAKVLAKVATLSDKKITIENVVDPSIIGGFILRIGDNQYNASVANRLQVLKRELSN
HHHHHHHHHHHCCCCEEEHHHCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA