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The map label for this gene is atpF

Identifier: 146298818

GI number: 146298818

Start: 1200499

End: 1200999

Strand: Direct

Name: atpF

Synonym: Fjoh_1057

Alternate gene names: 146298818

Gene position: 1200499-1200999 (Clockwise)

Preceding gene: 146298817

Following gene: 146298819

Centisome position: 19.69

GC content: 32.93

Gene sequence:

>501_bases
ATGGATAAGTTAATTAACGATTTTTCATTCGGATTATTCTTCTGGCAGGCTTTAATCTTGGTAATATTAATTTTGCTTTT
AGTAAAATTTGCTTGGAAACCAATTATGGAATCTATTACTGCAAGAGAAGAAGGTATTAAAAATGCATTGCTTTCTGCTG
AAAACGCAAAGAGAGAAATGGAAAATTTACAAGCTGACAATCAAAGAATTTTGAATGAAGCTCGTGCAGAACGTGACGCG
ATGTTAAAAGAAGCTCGCGAAATGAAAGAGAAAATGATTGCTGATTCTAAAAACGAAGCACAAGAAGCTGGTCAAAAAAT
GATTGAGCAGGCAAAAGCGGCTATCGAAAGCGAAAAAAATGCTGCAATGGCAGAATTGAAATCTCAGGTTTCAACTTTAT
CATTAAGCATCGCTGAAAAATTATTGAAAGAAGAATTATCTAACAAAGAATCTCAAACTAAATTAGTTGAGAAAATGTTA
GGTGACGTAAAGTTAAACTAA

Upstream 100 bases:

>100_bases
TAGGAAAATAATAAAGAGAGAAATAACAGCATCTTTAACGGTTGGTTAAAGATGTTGTTACTTTTAAAAAAGAAATTAAA
TATTTTAATATAGTTATAAA

Downstream 100 bases:

>100_bases
GATTATGGCAAGTACAAGAGCAGCAATTCGTTATGCAAAAGCAATTCTAGACTTAGCAAACTCTAAAGGTGTTGCCGAAG
CTGTCAATAACGATATGAAA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MDKLINDFSFGLFFWQALILVILILLLVKFAWKPIMESITAREEGIKNALLSAENAKREMENLQADNQRILNEARAERDA
MLKEAREMKEKMIADSKNEAQEAGQKMIEQAKAAIESEKNAAMAELKSQVSTLSLSIAEKLLKEELSNKESQTKLVEKML
GDVKLN

Sequences:

>Translated_166_residues
MDKLINDFSFGLFFWQALILVILILLLVKFAWKPIMESITAREEGIKNALLSAENAKREMENLQADNQRILNEARAERDA
MLKEAREMKEKMIADSKNEAQEAGQKMIEQAKAAIESEKNAAMAELKSQVSTLSLSIAEKLLKEELSNKESQTKLVEKML
GDVKLN
>Mature_166_residues
MDKLINDFSFGLFFWQALILVILILLLVKFAWKPIMESITAREEGIKNALLSAENAKREMENLQADNQRILNEARAERDA
MLKEAREMKEKMIADSKNEAQEAGQKMIEQAKAAIESEKNAAMAELKSQVSTLSLSIAEKLLKEELSNKESQTKLVEKML
GDVKLN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=151, Percent_Identity=28.476821192053, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_FLAJ1 (A5FL32)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001193409.1
- STRING:   A5FL32
- GeneID:   5091787
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_1057
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- ProtClustDB:   PRK14471
- BioCyc:   FJOH376686:FJOH_1057-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18799; Mature: 18799

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1da92014)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLINDFSFGLFFWQALILVILILLLVKFAWKPIMESITAREEGIKNALLSAENAKREM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENLQADNQRILNEARAERDAMLKEAREMKEKMIADSKNEAQEAGQKMIEQAKAAIESEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AAMAELKSQVSTLSLSIAEKLLKEELSNKESQTKLVEKMLGDVKLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MDKLINDFSFGLFFWQALILVILILLLVKFAWKPIMESITAREEGIKNALLSAENAKREM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENLQADNQRILNEARAERDAMLKEAREMKEKMIADSKNEAQEAGQKMIEQAKAAIESEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AAMAELKSQVSTLSLSIAEKLLKEELSNKESQTKLVEKMLGDVKLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA