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The map label for this gene is ylbK [H]

Identifier: 146298490

GI number: 146298490

Start: 802087

End: 804369

Strand: Direct

Name: ylbK [H]

Synonym: Fjoh_0727

Alternate gene names: 146298490

Gene position: 802087-804369 (Clockwise)

Preceding gene: 146298489

Following gene: 146298491

Centisome position: 13.16

GC content: 33.03

Gene sequence:

>2283_bases
ATGCGCCTAAATCAACATTCTAACGTAACTACCCGATCAAAAGGATTCTTTTTAAATTCTATTTGCATCGCGTCGTATGT
ATTTTTTATGCTGCTAATACTGTTTCCCGAAACTTCTTTTTCTCAGGAAATAAAAAAAGACAGCGTAAAAAGACCTAAAA
TTGGTTTGGTTTTAAGCGGTGGCGGCGCCAAAGGTTTTGCACATATTGGAGTTTTAAAAGTTTTGGAAGAAGCCGGAATC
AAAATTGATTATATTGGCGGAACAAGTATGGGATCTGTAATTGGCGGACTTTATGCTTCTGGCTACAATGCATCTCAAAT
TGATTCTATTTTCAAAAAAACCAATTTCGACGACCTTATTAACGATTATATTCCGCGTTCATCTAAAAATTTCTACGGAA
AGAAAAATGATGAATTATATGCAATAGTACTTCCTTTCAGTAATTTTAGAGTCGGTATTCCCGAAGCACTTTCAAAAGGA
ATGTACAACTACAATTTATTGAGCAGTTTAACGAGAAACGTTCGTCATGTACGTGATTTTAATAAACTGCCAACTCCATT
TTTATGTATCGGAACTAATATTGAAACCGGCGAAGAAGTTTTGCTTAACAAAGGAAATCTTGTTCAGGCTATGATGGCCA
GTGCTGCTTTTCCGTCTTTGTTTACTCCGGTAGAAATAGACGGCAATTTGTTAGTTGACGGTGGTGTTGTAAATAATTAT
CCTATAAAAGAAGTTCGAAATCTTGGCGCAGACATTATTATTGGTGTTGATGTTCAGGATGATTTAATGAAACGAAAAAA
CTTAAAAAACGCAACCCGAATCCTGGTTCAGATTACCAATCTGCAATCTATAGATAAAATGAAAAACAAAATAAAAGATA
CGGATGTTTACATAAAACCTGACATTCGTGATTATGGCGTAATTTCATTTGACAAAGGCGAAGAAATCATCAGAAAAGGT
GAGGAAGCGGCTTTTGCTGTTTACGAAAAAATCAAATCATTGGTAAATGAAGATAACTTTTATAAAAAACCAAAATTAAA
AGTTGCTACAGACACACTTAAAATTGAAAAAATAAATTCTGATCCATTAGACAATTATACGAGAGAGTACATTCGAGGAA
AACTTCGCTTTAAACCCGGAAGCACAATTACGTATGACGATCTTAAAACGGGAATCAATAATTTAAATGCAACTCAAAAC
TTTAGTACTATTTCTTATTGTCTTCAGCCAAACGGAGAGAAAGATGATTTAGATTTGGTTTTAAAAGAAAACCCTACTCA
AACCTTTCTAAAACTAGGACTTCATTATGACGGACTATACAAAAGTGCTGTTTTATTAAACTTAACTCATAAAAAGACTT
TCTTAAAAAATGATGTCACTTCGCTTGATATTATTTTGGGAGATAATTTTAGATACGATTTAAATTATTATGTAGAAAAT
GGTTTCAATATCAGTTTCGGTTTCCGTTCGCGACTAAGTCAGTTTAATAGAAACGTTACCACGAGTTTGAGCGGTCTAAT
TGCAGAGAATCAAAATCTAAATTTGATTAATGTTGATTTCATGGACTTGAGCAATCAGGCTTATTTTCAAACCATTTTTG
TGCAAAAGTTCTTAATGGGAGGCGGTTTAGAGTATAAATATCTTAAGATAAATTCGCCAACGCTTTCTAATGCCGAAAAC
ATAATTGACAAAAGTAATTATTTCAGCGCCTTTGCTTATTTAAAGTACGATTCGTTAGATGATAAATATTACCCAAGTTC
TGGTTTATATTTCTCTACAGACTTACAAACCTATTTAGCATCATCAGATTACACCAATAAGTTTAAACCTTTTTCAATTG
CAAAAGCCGAACTTGCTGTTGTAAGGCCATTATTTAGAAAAGCCACAATAAAAGTTGGAGCCGATGCCGGTTTTAATATT
GGCAGTGACAGCGTTCCGTTTTTTGATTTTATACTAGGCGGTTATGGATATAATAAGATTAACAACTTTAATTATTTCTA
TGGATATGACTTTTTAAGTATTGCCGGAAATAGTTTTATAAAAGCTGACATTGCTTTAGATTACGAAATTTTTAAAAAGA
ATCATATTAGTCTTTCGGCTAATTTTGCCAATTTAGGAGATGATATTTTCTCTTCTGTTGACTGGGTTTCTATGCCAAAG
TATACAGGATATGCAGTTGGTTATGGTTTAGAAACCATTATTGGTCCAATTGAAATAAAACAATCCTGGTCTCCAGAAAT
GTCAAAAAGTTTTACGTGGTTTAGCATTGGGTTTCAATTTTAG

Upstream 100 bases:

>100_bases
AAGATTGAAATTAGCGACAGAAAAAGAAATATCTGCCGTTGTCGGAGTATCAAAAGCAAAAAAAATTGTCGACTTTTACA
AAACCAATTAGCAGATTTTT

Downstream 100 bases:

>100_bases
TAGTATAACCGAGAATACTTCAATAAAATCTGTCTATTTTTTTACTTCATAAAAATTATATCAAAAAAACTAAGTTATTT
TATAGTTATAAATAATATAA

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 760; Mature: 760

Protein sequence:

>760_residues
MRLNQHSNVTTRSKGFFLNSICIASYVFFMLLILFPETSFSQEIKKDSVKRPKIGLVLSGGGAKGFAHIGVLKVLEEAGI
KIDYIGGTSMGSVIGGLYASGYNASQIDSIFKKTNFDDLINDYIPRSSKNFYGKKNDELYAIVLPFSNFRVGIPEALSKG
MYNYNLLSSLTRNVRHVRDFNKLPTPFLCIGTNIETGEEVLLNKGNLVQAMMASAAFPSLFTPVEIDGNLLVDGGVVNNY
PIKEVRNLGADIIIGVDVQDDLMKRKNLKNATRILVQITNLQSIDKMKNKIKDTDVYIKPDIRDYGVISFDKGEEIIRKG
EEAAFAVYEKIKSLVNEDNFYKKPKLKVATDTLKIEKINSDPLDNYTREYIRGKLRFKPGSTITYDDLKTGINNLNATQN
FSTISYCLQPNGEKDDLDLVLKENPTQTFLKLGLHYDGLYKSAVLLNLTHKKTFLKNDVTSLDIILGDNFRYDLNYYVEN
GFNISFGFRSRLSQFNRNVTTSLSGLIAENQNLNLINVDFMDLSNQAYFQTIFVQKFLMGGGLEYKYLKINSPTLSNAEN
IIDKSNYFSAFAYLKYDSLDDKYYPSSGLYFSTDLQTYLASSDYTNKFKPFSIAKAELAVVRPLFRKATIKVGADAGFNI
GSDSVPFFDFILGGYGYNKINNFNYFYGYDFLSIAGNSFIKADIALDYEIFKKNHISLSANFANLGDDIFSSVDWVSMPK
YTGYAVGYGLETIIGPIEIKQSWSPEMSKSFTWFSIGFQF

Sequences:

>Translated_760_residues
MRLNQHSNVTTRSKGFFLNSICIASYVFFMLLILFPETSFSQEIKKDSVKRPKIGLVLSGGGAKGFAHIGVLKVLEEAGI
KIDYIGGTSMGSVIGGLYASGYNASQIDSIFKKTNFDDLINDYIPRSSKNFYGKKNDELYAIVLPFSNFRVGIPEALSKG
MYNYNLLSSLTRNVRHVRDFNKLPTPFLCIGTNIETGEEVLLNKGNLVQAMMASAAFPSLFTPVEIDGNLLVDGGVVNNY
PIKEVRNLGADIIIGVDVQDDLMKRKNLKNATRILVQITNLQSIDKMKNKIKDTDVYIKPDIRDYGVISFDKGEEIIRKG
EEAAFAVYEKIKSLVNEDNFYKKPKLKVATDTLKIEKINSDPLDNYTREYIRGKLRFKPGSTITYDDLKTGINNLNATQN
FSTISYCLQPNGEKDDLDLVLKENPTQTFLKLGLHYDGLYKSAVLLNLTHKKTFLKNDVTSLDIILGDNFRYDLNYYVEN
GFNISFGFRSRLSQFNRNVTTSLSGLIAENQNLNLINVDFMDLSNQAYFQTIFVQKFLMGGGLEYKYLKINSPTLSNAEN
IIDKSNYFSAFAYLKYDSLDDKYYPSSGLYFSTDLQTYLASSDYTNKFKPFSIAKAELAVVRPLFRKATIKVGADAGFNI
GSDSVPFFDFILGGYGYNKINNFNYFYGYDFLSIAGNSFIKADIALDYEIFKKNHISLSANFANLGDDIFSSVDWVSMPK
YTGYAVGYGLETIIGPIEIKQSWSPEMSKSFTWFSIGFQF
>Mature_760_residues
MRLNQHSNVTTRSKGFFLNSICIASYVFFMLLILFPETSFSQEIKKDSVKRPKIGLVLSGGGAKGFAHIGVLKVLEEAGI
KIDYIGGTSMGSVIGGLYASGYNASQIDSIFKKTNFDDLINDYIPRSSKNFYGKKNDELYAIVLPFSNFRVGIPEALSKG
MYNYNLLSSLTRNVRHVRDFNKLPTPFLCIGTNIETGEEVLLNKGNLVQAMMASAAFPSLFTPVEIDGNLLVDGGVVNNY
PIKEVRNLGADIIIGVDVQDDLMKRKNLKNATRILVQITNLQSIDKMKNKIKDTDVYIKPDIRDYGVISFDKGEEIIRKG
EEAAFAVYEKIKSLVNEDNFYKKPKLKVATDTLKIEKINSDPLDNYTREYIRGKLRFKPGSTITYDDLKTGINNLNATQN
FSTISYCLQPNGEKDDLDLVLKENPTQTFLKLGLHYDGLYKSAVLLNLTHKKTFLKNDVTSLDIILGDNFRYDLNYYVEN
GFNISFGFRSRLSQFNRNVTTSLSGLIAENQNLNLINVDFMDLSNQAYFQTIFVQKFLMGGGLEYKYLKINSPTLSNAEN
IIDKSNYFSAFAYLKYDSLDDKYYPSSGLYFSTDLQTYLASSDYTNKFKPFSIAKAELAVVRPLFRKATIKVGADAGFNI
GSDSVPFFDFILGGYGYNKINNFNYFYGYDFLSIAGNSFIKADIALDYEIFKKNHISLSANFANLGDDIFSSVDWVSMPK
YTGYAVGYGLETIIGPIEIKQSWSPEMSKSFTWFSIGFQF

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=214, Percent_Identity=31.3084112149533, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI260656041, Length=214, Percent_Identity=31.3084112149533, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI116256487, Length=214, Percent_Identity=31.3084112149533, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI260656043, Length=214, Percent_Identity=31.3084112149533, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI260656037, Length=214, Percent_Identity=31.3084112149533, Blast_Score=99, Evalue=2e-20,
Organism=Escherichia coli, GI226510936, Length=214, Percent_Identity=32.2429906542056, Blast_Score=112, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI71997289, Length=279, Percent_Identity=27.9569892473118, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71997299, Length=279, Percent_Identity=27.9569892473118, Blast_Score=85, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323581, Length=296, Percent_Identity=30.4054054054054, Blast_Score=120, Evalue=9e-28,
Organism=Drosophila melanogaster, GI28571388, Length=307, Percent_Identity=28.3387622149837, Blast_Score=86, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281376913, Length=305, Percent_Identity=27.5409836065574, Blast_Score=83, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 85596; Mature: 85596

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNQHSNVTTRSKGFFLNSICIASYVFFMLLILFPETSFSQEIKKDSVKRPKIGLVLSG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEC
GGAKGFAHIGVLKVLEEAGIKIDYIGGTSMGSVIGGLYASGYNASQIDSIFKKTNFDDLI
CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
NDYIPRSSKNFYGKKNDELYAIVLPFSNFRVGIPEALSKGMYNYNLLSSLTRNVRHVRDF
HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
NKLPTPFLCIGTNIETGEEVLLNKGNLVQAMMASAAFPSLFTPVEIDGNLLVDGGVVNNY
HCCCCCEEEEECCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCEEECCCEEEECCCCCCC
PIKEVRNLGADIIIGVDVQDDLMKRKNLKNATRILVQITNLQSIDKMKNKIKDTDVYIKP
CHHHHHHCCCCEEEEECCHHHHHHHHCCCCHHEEEEEECCHHHHHHHHHHCCCCCEEECC
DIRDYGVISFDKGEEIIRKGEEAAFAVYEKIKSLVNEDNFYKKPKLKVATDTLKIEKINS
CCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEEEEECCC
DPLDNYTREYIRGKLRFKPGSTITYDDLKTGINNLNATQNFSTISYCLQPNGEKDDLDLV
CCCHHHHHHHHCEEEEECCCCEEEHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEE
LKENPTQTFLKLGLHYDGLYKSAVLLNLTHKKTFLKNDVTSLDIILGDNFRYDLNYYVEN
EECCCHHHHHHHCCCCCCHHHCEEEEEEHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEC
GFNISFGFRSRLSQFNRNVTTSLSGLIAENQNLNLINVDFMDLSNQAYFQTIFVQKFLMG
CCEEEEHHHHHHHHHCCCHHHHHHHHEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHC
GGLEYKYLKINSPTLSNAENIIDKSNYFSAFAYLKYDSLDDKYYPSSGLYFSTDLQTYLA
CCCEEEEEEECCCCCCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCHHHHHC
SSDYTNKFKPFSIAKAELAVVRPLFRKATIKVGADAGFNIGSDSVPFFDFILGGYGYNKI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCC
NNFNYFYGYDFLSIAGNSFIKADIALDYEIFKKNHISLSANFANLGDDIFSSVDWVSMPK
CCCEEEECCCCHHHCCCCEEEEEEEEEHHHHCCCCEEEEECHHHCCHHHHCCCCCCCCCC
YTGYAVGYGLETIIGPIEIKQSWSPEMSKSFTWFSIGFQF
CCCEEECCCHHHHCCCEEECCCCCCHHHCCEEEEEEEECC
>Mature Secondary Structure
MRLNQHSNVTTRSKGFFLNSICIASYVFFMLLILFPETSFSQEIKKDSVKRPKIGLVLSG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEC
GGAKGFAHIGVLKVLEEAGIKIDYIGGTSMGSVIGGLYASGYNASQIDSIFKKTNFDDLI
CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
NDYIPRSSKNFYGKKNDELYAIVLPFSNFRVGIPEALSKGMYNYNLLSSLTRNVRHVRDF
HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
NKLPTPFLCIGTNIETGEEVLLNKGNLVQAMMASAAFPSLFTPVEIDGNLLVDGGVVNNY
HCCCCCEEEEECCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCEEECCCEEEECCCCCCC
PIKEVRNLGADIIIGVDVQDDLMKRKNLKNATRILVQITNLQSIDKMKNKIKDTDVYIKP
CHHHHHHCCCCEEEEECCHHHHHHHHCCCCHHEEEEEECCHHHHHHHHHHCCCCCEEECC
DIRDYGVISFDKGEEIIRKGEEAAFAVYEKIKSLVNEDNFYKKPKLKVATDTLKIEKINS
CCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEEEEECCC
DPLDNYTREYIRGKLRFKPGSTITYDDLKTGINNLNATQNFSTISYCLQPNGEKDDLDLV
CCCHHHHHHHHCEEEEECCCCEEEHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEE
LKENPTQTFLKLGLHYDGLYKSAVLLNLTHKKTFLKNDVTSLDIILGDNFRYDLNYYVEN
EECCCHHHHHHHCCCCCCHHHCEEEEEEHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEC
GFNISFGFRSRLSQFNRNVTTSLSGLIAENQNLNLINVDFMDLSNQAYFQTIFVQKFLMG
CCEEEEHHHHHHHHHCCCHHHHHHHHEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHC
GGLEYKYLKINSPTLSNAENIIDKSNYFSAFAYLKYDSLDDKYYPSSGLYFSTDLQTYLA
CCCEEEEEEECCCCCCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCHHHHHC
SSDYTNKFKPFSIAKAELAVVRPLFRKATIKVGADAGFNIGSDSVPFFDFILGGYGYNKI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCC
NNFNYFYGYDFLSIAGNSFIKADIALDYEIFKKNHISLSANFANLGDDIFSSVDWVSMPK
CCCEEEECCCCHHHCCCCEEEEEEEEEHHHHCCCCEEEEECHHHCCHHHHCCCCCCCCCC
YTGYAVGYGLETIIGPIEIKQSWSPEMSKSFTWFSIGFQF
CCCEEECCCHHHHCCCEEECCCCCCHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]