Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146298486

Identifier: 146298486

GI number: 146298486

Start: 797772

End: 798518

Strand: Direct

Name: 146298486

Synonym: Fjoh_0723

Alternate gene names: NA

Gene position: 797772-798518 (Clockwise)

Preceding gene: 146298485

Following gene: 146298489

Centisome position: 13.08

GC content: 32.53

Gene sequence:

>747_bases
ATGAAAAACATACTATATCTTTTTTTACTAATCTCTCAGGTTTTCTTTGCTCAAAGCAGCTTTGAAAAAGGAAATGCTTT
GTACCAAAAGGGACAATATCAGGAAGCTGCTCAGGTTTATGAAGATATTCTTAAAGAAAACAAACAGCAGTCGGCAGAGT
TATATTTTAACCTGGCAAATAGTTATTACAAACTAAATAAGGTTGCTCCTTCTATCTATAATTATGAAAAAGCATTGGTA
TTAAAACCCAATGATCCTGAAACTTTAAACAACCTTAAGTTTGCCAAAAAACTAACAATTGATGAAATTAAAGAAGTTCC
AAAAGTAGGTTTTGCAAAACTGATTCAGAACTTTACCGGCATTTTTGATTACAATCAATGGGCAAAAATTTCTGTTGCCA
TTGCCTTTTTGTTTTTGCTTAGTTTTATTGGTTATTATTTTTCGCAGCTTACCCTTACTAAAAGAATTTACTTTATTGCA
ATGTTCATTTTCTTAGTAGCAATATTATTAAGTGTTTCAGCAGGAATGTCTGAAAAAAACCATTTTGACAATGATCGTCC
TGCCATTGTGTTTTCTGAATTAAGTGAAGTTCGAAGCGAACCGCAAAAAGCAGGTTCTGCCATAATATTACTTCATGAAG
GCGCAAAAGTGTATGTTATGGAAACCGTTGGAAAATGGAAAAAAATTGAATTAACTGACGGTCAGGAAGGCTGGATTGAT
GCTACGACAATTAAGGAAGTAAAATAA

Upstream 100 bases:

>100_bases
AGCGGTTTTAATTATTTCAGAATTAGAAAAGCAAATCGTTTAGTTTTTAACTTAAAAATAAAGCCGCATGTTTTAAAATG
TCGGGTTTAACTAAATAATA

Downstream 100 bases:

>100_bases
GCTTAAATCTCAATAAAAAAAATCCCAAATTCCAAATATCAATTCTGGAATTTGGGATTTTCTTTTTACATTGTTTTTAA
AACGAATTTTTTAAAAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; BatE Protein; BatD Protein; Aerotolerance-Related Protein BatE; Tetratricopeptide Repeat Protein; BatE TRP Domain Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TRP Domain-Containing Protein BatE; Tetratricopeptide TPR_2 Repeat Protein; SH3 Type 3 Domain Protein; BatD/BatE Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLANSYYKLNKVAPSIYNYEKALV
LKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTGIFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIA
MFIFLVAILLSVSAGMSEKNHFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID
ATTIKEVK

Sequences:

>Translated_248_residues
MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLANSYYKLNKVAPSIYNYEKALV
LKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTGIFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIA
MFIFLVAILLSVSAGMSEKNHFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID
ATTIKEVK
>Mature_248_residues
MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLANSYYKLNKVAPSIYNYEKALV
LKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTGIFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIA
MFIFLVAILLSVSAGMSEKNHFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID
ATTIKEVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28415; Mature: 28415

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLAN
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
SYYKLNKVAPSIYNYEKALVLKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTG
HHHHHHHHCHHHHCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH
IFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIAMFIFLVAILLSVSAGMSEKN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID
CCCCCCCEEHHHHHHHHHHCHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCEE
ATTIKEVK
CCHHCCCC
>Mature Secondary Structure
MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLAN
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
SYYKLNKVAPSIYNYEKALVLKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTG
HHHHHHHHCHHHHCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH
IFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIAMFIFLVAILLSVSAGMSEKN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID
CCCCCCCEEHHHHHHHHHHCHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCEE
ATTIKEVK
CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA