| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298486
Identifier: 146298486
GI number: 146298486
Start: 797772
End: 798518
Strand: Direct
Name: 146298486
Synonym: Fjoh_0723
Alternate gene names: NA
Gene position: 797772-798518 (Clockwise)
Preceding gene: 146298485
Following gene: 146298489
Centisome position: 13.08
GC content: 32.53
Gene sequence:
>747_bases ATGAAAAACATACTATATCTTTTTTTACTAATCTCTCAGGTTTTCTTTGCTCAAAGCAGCTTTGAAAAAGGAAATGCTTT GTACCAAAAGGGACAATATCAGGAAGCTGCTCAGGTTTATGAAGATATTCTTAAAGAAAACAAACAGCAGTCGGCAGAGT TATATTTTAACCTGGCAAATAGTTATTACAAACTAAATAAGGTTGCTCCTTCTATCTATAATTATGAAAAAGCATTGGTA TTAAAACCCAATGATCCTGAAACTTTAAACAACCTTAAGTTTGCCAAAAAACTAACAATTGATGAAATTAAAGAAGTTCC AAAAGTAGGTTTTGCAAAACTGATTCAGAACTTTACCGGCATTTTTGATTACAATCAATGGGCAAAAATTTCTGTTGCCA TTGCCTTTTTGTTTTTGCTTAGTTTTATTGGTTATTATTTTTCGCAGCTTACCCTTACTAAAAGAATTTACTTTATTGCA ATGTTCATTTTCTTAGTAGCAATATTATTAAGTGTTTCAGCAGGAATGTCTGAAAAAAACCATTTTGACAATGATCGTCC TGCCATTGTGTTTTCTGAATTAAGTGAAGTTCGAAGCGAACCGCAAAAAGCAGGTTCTGCCATAATATTACTTCATGAAG GCGCAAAAGTGTATGTTATGGAAACCGTTGGAAAATGGAAAAAAATTGAATTAACTGACGGTCAGGAAGGCTGGATTGAT GCTACGACAATTAAGGAAGTAAAATAA
Upstream 100 bases:
>100_bases AGCGGTTTTAATTATTTCAGAATTAGAAAAGCAAATCGTTTAGTTTTTAACTTAAAAATAAAGCCGCATGTTTTAAAATG TCGGGTTTAACTAAATAATA
Downstream 100 bases:
>100_bases GCTTAAATCTCAATAAAAAAAATCCCAAATTCCAAATATCAATTCTGGAATTTGGGATTTTCTTTTTACATTGTTTTTAA AACGAATTTTTTAAAAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; BatE Protein; BatD Protein; Aerotolerance-Related Protein BatE; Tetratricopeptide Repeat Protein; BatE TRP Domain Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TRP Domain-Containing Protein BatE; Tetratricopeptide TPR_2 Repeat Protein; SH3 Type 3 Domain Protein; BatD/BatE Protein
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLANSYYKLNKVAPSIYNYEKALV LKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTGIFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIA MFIFLVAILLSVSAGMSEKNHFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID ATTIKEVK
Sequences:
>Translated_248_residues MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLANSYYKLNKVAPSIYNYEKALV LKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTGIFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIA MFIFLVAILLSVSAGMSEKNHFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID ATTIKEVK >Mature_248_residues MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLANSYYKLNKVAPSIYNYEKALV LKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTGIFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIA MFIFLVAILLSVSAGMSEKNHFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID ATTIKEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28415; Mature: 28415
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLAN CCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH SYYKLNKVAPSIYNYEKALVLKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTG HHHHHHHHCHHHHCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH IFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIAMFIFLVAILLSVSAGMSEKN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID CCCCCCCEEHHHHHHHHHHCHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCEE ATTIKEVK CCHHCCCC >Mature Secondary Structure MKNILYLFLLISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKENKQQSAELYFNLAN CCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH SYYKLNKVAPSIYNYEKALVLKPNDPETLNNLKFAKKLTIDEIKEVPKVGFAKLIQNFTG HHHHHHHHCHHHHCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH IFDYNQWAKISVAIAFLFLLSFIGYYFSQLTLTKRIYFIAMFIFLVAILLSVSAGMSEKN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQEGWID CCCCCCCEEHHHHHHHHHHCHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCEE ATTIKEVK CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA