| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298485
Identifier: 146298485
GI number: 146298485
Start: 795960
End: 797714
Strand: Direct
Name: 146298485
Synonym: Fjoh_0722
Alternate gene names: NA
Gene position: 795960-797714 (Clockwise)
Preceding gene: 146298484
Following gene: 146298486
Centisome position: 13.06
GC content: 34.36
Gene sequence:
>1755_bases ATGAAAAGATATCTAATTCTATTACTACTCGCTTTTCAAGGCCTTATGGCTCAAGTTCAATTTGAAGCCAAAGTAAGCAA AAACACGCTTGGACTTAACGAAAGACTCCGTATTGATTTTATTATGAATGTTGACGGAGATAATTTTGATCAGCCTGCAT TTGAAGGTTTTAAACTTGTAGCCGGACCAAGCCAGCAAATCAGCCAGTCTTGGATTAACGGACGCAGCTCTTTTCAAAAA GTATACTCTTATATTTTACAGCCTGAGAAAAAAGGAACTGTTATTATCAAACAAGCTGCAATAGAATATAATGGCCAGAT TTATAAAACGTCTCCCATAAAAGTTACAGTTACGAATGCTGTAGCACAGGAACGAGATCCAAATGATTACAGACAGCAAG GCGGTGCATCTGGAAATGAATTACTACAGTTAGTTGCAGAAGTTTCTAAAACAACTCCGTACGTAAACGAACCTATTACA GTTGTTTACAAATTGTATTTTAATGAAATTGGAGTTACCGGATTTAGAGAACTTGCTAAACCTAAATACAATGATTTCTG GAATCAGAATATTGATATCAAACAATTGGTAATGGAAGAAGGCAGTTATCAGGGCCAGAGATGTCATTATGTAGTATTAA AGAAAACTATTCTATATCCTCAAAAATCAGGAAGATTAACAATTGAACCTCTTTCATTAGATATTGGAGTGCAGCTGCCA ACAAACCGACGTGATATGTTTGGCCAGATGATTATTGCCGAAGACAATAAAATTGTAACTACCGGAGCTAAAGGAATTAG TGTAAGACCGCTTCCTGAAACTGGCAAACCAGAAGGTTTTACTGGAGCAGTTGGTAAATTCAATTTTACAGTTACTCCGT CAAGAACAACATTAAAAAGCGGAGAAGGTTTAGATCTAATTGTGAGTGCTTCAGGAACCGGAAACATGAAATTGTTTACA CTTCCAAAACCTGTTGTTCCAAATGCATTAGAAATGTATGATCCGGTTCACGATGAAAAAGTAACCACGTCATTGTCTGG AATGTCTGGAAAAATAACCGACAAATACACTATTATTCCGCAGTATAAAGGAAAATACGCCATCAAACCAATGACGTTCT CATATTTTGATTTGAGTACGAATTCATATAAAACCATAACTTCTCCAGAAATTATGGTCGATGTTTTAGACGGTCCGACT TTAGCAGAAGCAAATCCTTCTACTGCATCTAAAAATGTTATTACAAAAACAGAACAGTTTAAATATATTAAACCAAAAAC AACTTTAGTAAGCATTGCTAAAAATGATTTTTATGGTTCAAATTTATATTACGCTTTGTTATTCTTCCCATTTGCTATTA TTCCAATCATCATTTTGGCTAAGAAGAAAAAAGAAGCAATTGACAGTGATGTAACTGGAAACAGAATCAGAATGAACAAT AAACTTGCGAAGAAATATTTATCGCAGGCTAAAAAACAGCTTAACAACAAAGAAGCTTTTTATATTGCTCTGGAAAAAGC AATGCATAATTTCTTAAAAGCAAAACTGCATATTGAAACAACTGAAATGAGTAAAGATAATATTCGTGAATTGCTTTTAT CAAGAAATGCAAACCCTGAAACGGTTCAAAATTTCATTAATTTGACTGAAAACTGTGAATTCGCACGTTATGCTCCCGCA TCAAGCACTTCGATTCAGCAGGATTATGATAAAGCGGTTTTAATTATTTCAGAATTAGAAAAGCAAATCGTTTAG
Upstream 100 bases:
>100_bases AAAATAAGTTGAATCGTTTAATCGTTATTAATTTGTTTATCTATTAAACAATTTGGCGAATAAACGATTTAGCAGTTAAA CAAACAATGATCAAACATTA
Downstream 100 bases:
>100_bases TTTTTAACTTAAAAATAAAGCCGCATGTTTTAAAATGTCGGGTTTAACTAAATAATAATGAAAAACATACTATATCTTTT TTTACTAATCTCTCAGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Aerotolerance-Related Exported Protein; Aerotolerance-Related Protein BatD; Aerotolerance-Related Cytoplasmic Membrane Protein BatD; Aerotolerance-Like Exported Protein; BatD/BatE Protein; Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLVAGPSQQISQSWINGRSSFQK VYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNAVAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPIT VVYKLYFNEIGVTGFRELAKPKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKSGEGLDLIVSASGTGNMKLFT LPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIPQYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPT LAEANPSTASKNVITKTEQFKYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPETVQNFINLTENCEFARYAPA SSTSIQQDYDKAVLIISELEKQIV
Sequences:
>Translated_584_residues MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLVAGPSQQISQSWINGRSSFQK VYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNAVAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPIT VVYKLYFNEIGVTGFRELAKPKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKSGEGLDLIVSASGTGNMKLFT LPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIPQYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPT LAEANPSTASKNVITKTEQFKYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPETVQNFINLTENCEFARYAPA SSTSIQQDYDKAVLIISELEKQIV >Mature_584_residues MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLVAGPSQQISQSWINGRSSFQK VYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNAVAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPIT VVYKLYFNEIGVTGFRELAKPKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKSGEGLDLIVSASGTGNMKLFT LPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIPQYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPT LAEANPSTASKNVITKTEQFKYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPETVQNFINLTENCEFARYAPA SSTSIQQDYDKAVLIISELEKQIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65564; Mature: 65564
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLV CCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHCCEEEE AGPSQQISQSWINGRSSFQKVYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNA ECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEECCEEEEEEHH VAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPITVVYKLYFNEIGVTGFRELAK HHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHHCCCCHHHHHCC PKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP CCCCHHCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEECC TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKS CCCHHHCCEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCEECC GEGLDLIVSASGTGNMKLFTLPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIP CCCEEEEEECCCCCCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEEE QYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPTLAEANPSTASKNVITKTEQF CCCCCEEECCEEEEEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCE KYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN EEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECH KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPE HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCHH TVQNFINLTENCEFARYAPASSTSIQQDYDKAVLIISELEKQIV HHHHHHHHHCCCCCEEECCCCCCCHHHCCCHHEEEHHHHHHHCC >Mature Secondary Structure MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLV CCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHCCEEEE AGPSQQISQSWINGRSSFQKVYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNA ECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEECCEEEEEEHH VAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPITVVYKLYFNEIGVTGFRELAK HHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHHCCCCHHHHHCC PKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP CCCCHHCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEECC TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKS CCCHHHCCEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCEECC GEGLDLIVSASGTGNMKLFTLPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIP CCCEEEEEECCCCCCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEEE QYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPTLAEANPSTASKNVITKTEQF CCCCCEEECCEEEEEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCE KYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN EEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECH KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPE HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCHH TVQNFINLTENCEFARYAPASSTSIQQDYDKAVLIISELEKQIV HHHHHHHHHCCCCCEEECCCCCCCHHHCCCHHEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA