Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146298485

Identifier: 146298485

GI number: 146298485

Start: 795960

End: 797714

Strand: Direct

Name: 146298485

Synonym: Fjoh_0722

Alternate gene names: NA

Gene position: 795960-797714 (Clockwise)

Preceding gene: 146298484

Following gene: 146298486

Centisome position: 13.06

GC content: 34.36

Gene sequence:

>1755_bases
ATGAAAAGATATCTAATTCTATTACTACTCGCTTTTCAAGGCCTTATGGCTCAAGTTCAATTTGAAGCCAAAGTAAGCAA
AAACACGCTTGGACTTAACGAAAGACTCCGTATTGATTTTATTATGAATGTTGACGGAGATAATTTTGATCAGCCTGCAT
TTGAAGGTTTTAAACTTGTAGCCGGACCAAGCCAGCAAATCAGCCAGTCTTGGATTAACGGACGCAGCTCTTTTCAAAAA
GTATACTCTTATATTTTACAGCCTGAGAAAAAAGGAACTGTTATTATCAAACAAGCTGCAATAGAATATAATGGCCAGAT
TTATAAAACGTCTCCCATAAAAGTTACAGTTACGAATGCTGTAGCACAGGAACGAGATCCAAATGATTACAGACAGCAAG
GCGGTGCATCTGGAAATGAATTACTACAGTTAGTTGCAGAAGTTTCTAAAACAACTCCGTACGTAAACGAACCTATTACA
GTTGTTTACAAATTGTATTTTAATGAAATTGGAGTTACCGGATTTAGAGAACTTGCTAAACCTAAATACAATGATTTCTG
GAATCAGAATATTGATATCAAACAATTGGTAATGGAAGAAGGCAGTTATCAGGGCCAGAGATGTCATTATGTAGTATTAA
AGAAAACTATTCTATATCCTCAAAAATCAGGAAGATTAACAATTGAACCTCTTTCATTAGATATTGGAGTGCAGCTGCCA
ACAAACCGACGTGATATGTTTGGCCAGATGATTATTGCCGAAGACAATAAAATTGTAACTACCGGAGCTAAAGGAATTAG
TGTAAGACCGCTTCCTGAAACTGGCAAACCAGAAGGTTTTACTGGAGCAGTTGGTAAATTCAATTTTACAGTTACTCCGT
CAAGAACAACATTAAAAAGCGGAGAAGGTTTAGATCTAATTGTGAGTGCTTCAGGAACCGGAAACATGAAATTGTTTACA
CTTCCAAAACCTGTTGTTCCAAATGCATTAGAAATGTATGATCCGGTTCACGATGAAAAAGTAACCACGTCATTGTCTGG
AATGTCTGGAAAAATAACCGACAAATACACTATTATTCCGCAGTATAAAGGAAAATACGCCATCAAACCAATGACGTTCT
CATATTTTGATTTGAGTACGAATTCATATAAAACCATAACTTCTCCAGAAATTATGGTCGATGTTTTAGACGGTCCGACT
TTAGCAGAAGCAAATCCTTCTACTGCATCTAAAAATGTTATTACAAAAACAGAACAGTTTAAATATATTAAACCAAAAAC
AACTTTAGTAAGCATTGCTAAAAATGATTTTTATGGTTCAAATTTATATTACGCTTTGTTATTCTTCCCATTTGCTATTA
TTCCAATCATCATTTTGGCTAAGAAGAAAAAAGAAGCAATTGACAGTGATGTAACTGGAAACAGAATCAGAATGAACAAT
AAACTTGCGAAGAAATATTTATCGCAGGCTAAAAAACAGCTTAACAACAAAGAAGCTTTTTATATTGCTCTGGAAAAAGC
AATGCATAATTTCTTAAAAGCAAAACTGCATATTGAAACAACTGAAATGAGTAAAGATAATATTCGTGAATTGCTTTTAT
CAAGAAATGCAAACCCTGAAACGGTTCAAAATTTCATTAATTTGACTGAAAACTGTGAATTCGCACGTTATGCTCCCGCA
TCAAGCACTTCGATTCAGCAGGATTATGATAAAGCGGTTTTAATTATTTCAGAATTAGAAAAGCAAATCGTTTAG

Upstream 100 bases:

>100_bases
AAAATAAGTTGAATCGTTTAATCGTTATTAATTTGTTTATCTATTAAACAATTTGGCGAATAAACGATTTAGCAGTTAAA
CAAACAATGATCAAACATTA

Downstream 100 bases:

>100_bases
TTTTTAACTTAAAAATAAAGCCGCATGTTTTAAAATGTCGGGTTTAACTAAATAATAATGAAAAACATACTATATCTTTT
TTTACTAATCTCTCAGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Aerotolerance-Related Exported Protein; Aerotolerance-Related Protein BatD; Aerotolerance-Related Cytoplasmic Membrane Protein BatD; Aerotolerance-Like Exported Protein; BatD/BatE Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLVAGPSQQISQSWINGRSSFQK
VYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNAVAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPIT
VVYKLYFNEIGVTGFRELAKPKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP
TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKSGEGLDLIVSASGTGNMKLFT
LPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIPQYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPT
LAEANPSTASKNVITKTEQFKYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN
KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPETVQNFINLTENCEFARYAPA
SSTSIQQDYDKAVLIISELEKQIV

Sequences:

>Translated_584_residues
MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLVAGPSQQISQSWINGRSSFQK
VYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNAVAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPIT
VVYKLYFNEIGVTGFRELAKPKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP
TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKSGEGLDLIVSASGTGNMKLFT
LPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIPQYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPT
LAEANPSTASKNVITKTEQFKYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN
KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPETVQNFINLTENCEFARYAPA
SSTSIQQDYDKAVLIISELEKQIV
>Mature_584_residues
MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLVAGPSQQISQSWINGRSSFQK
VYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNAVAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPIT
VVYKLYFNEIGVTGFRELAKPKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP
TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKSGEGLDLIVSASGTGNMKLFT
LPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIPQYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPT
LAEANPSTASKNVITKTEQFKYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN
KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPETVQNFINLTENCEFARYAPA
SSTSIQQDYDKAVLIISELEKQIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65564; Mature: 65564

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLV
CCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHCCEEEE
AGPSQQISQSWINGRSSFQKVYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNA
ECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEECCEEEEEEHH
VAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPITVVYKLYFNEIGVTGFRELAK
HHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHHCCCCHHHHHCC
PKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP
CCCCHHCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEECC
TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKS
CCCHHHCCEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCEECC
GEGLDLIVSASGTGNMKLFTLPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIP
CCCEEEEEECCCCCCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEEE
QYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPTLAEANPSTASKNVITKTEQF
CCCCCEEECCEEEEEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCE
KYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN
EEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECH
KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPE
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCHH
TVQNFINLTENCEFARYAPASSTSIQQDYDKAVLIISELEKQIV
HHHHHHHHHCCCCCEEECCCCCCCHHHCCCHHEEEHHHHHHHCC
>Mature Secondary Structure
MKRYLILLLLAFQGLMAQVQFEAKVSKNTLGLNERLRIDFIMNVDGDNFDQPAFEGFKLV
CCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCHHCCEEEE
AGPSQQISQSWINGRSSFQKVYSYILQPEKKGTVIIKQAAIEYNGQIYKTSPIKVTVTNA
ECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEECCEEEEEEHH
VAQERDPNDYRQQGGASGNELLQLVAEVSKTTPYVNEPITVVYKLYFNEIGVTGFRELAK
HHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHHCCCCHHHHHCC
PKYNDFWNQNIDIKQLVMEEGSYQGQRCHYVVLKKTILYPQKSGRLTIEPLSLDIGVQLP
CCCCHHCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEECC
TNRRDMFGQMIIAEDNKIVTTGAKGISVRPLPETGKPEGFTGAVGKFNFTVTPSRTTLKS
CCCHHHCCEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCEECC
GEGLDLIVSASGTGNMKLFTLPKPVVPNALEMYDPVHDEKVTTSLSGMSGKITDKYTIIP
CCCEEEEEECCCCCCEEEEECCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEEE
QYKGKYAIKPMTFSYFDLSTNSYKTITSPEIMVDVLDGPTLAEANPSTASKNVITKTEQF
CCCCCEEECCEEEEEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCE
KYIKPKTTLVSIAKNDFYGSNLYYALLFFPFAIIPIIILAKKKKEAIDSDVTGNRIRMNN
EEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECH
KLAKKYLSQAKKQLNNKEAFYIALEKAMHNFLKAKLHIETTEMSKDNIRELLLSRNANPE
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCHH
TVQNFINLTENCEFARYAPASSTSIQQDYDKAVLIISELEKQIV
HHHHHHHHHCCCCCEEECCCCCCCHHHCCCHHEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA