| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298484
Identifier: 146298484
GI number: 146298484
Start: 795085
End: 795861
Strand: Direct
Name: 146298484
Synonym: Fjoh_0721
Alternate gene names: NA
Gene position: 795085-795861 (Clockwise)
Preceding gene: 146298483
Following gene: 146298485
Centisome position: 13.04
GC content: 34.62
Gene sequence:
>777_bases ATGAAAAATTTACTTCTTTATATTTTACTAACGCTTTCTTTTGCAGCTGCTGCTCAGGAAAAAGACAAGACATTGCCTGA TGCCAATGAAGAATATAAGCAGAATAAATTTACTGAAGCAGAGGCCAATTATAGAATTTCGGCGTCAAAATTTTCAAAAC GCGCTGCCGGGTCTTACAATTTAGGAAACTCAATTTACAGACAAAACCAGCCTTCTGAAGCAAAATACGCTTACGCTAAT GCCATAAAAAGAGCTAAAACAAGACCAGAAAAGCATAAAGCTTATCACAATCTTGGAAATGTTTTTATGAAGGAGAAAGA TTATTCGCAGGCTGTTGAAGCATACAAAGAGGCTTTACGTAACGATCCAACCGATGATGAAACACGTTACAACTATGTGT ATGCAAAACAAAAGCTAAAAGAAAATCCGCCTAAAAACGATAAAAACAAAGACAAGAATAAGGATAAAGACAAAGACAAG GATAAAAACAAAGATAAAGACAAAGACAAGGACAAAAATAAAGACAAGGATAAGGACAAAGACAAGAAAGACGATAAAGG CGACAAAGACAAGGACAAAAAAGATGGCAAAAATGATCCTAAAAAAGATGACAAGTCTGATAATAAAGGAGAACCAAAAC GAATGCCTGGAGGAATTTCAAAAGAACGTGTTCAGAACTTGTTAGATGCCGTAAACAACGAAGAAAAGAAAATTCAAGAT AAAGTAAACGCTCAAAAAGTAAAACCTAATACCAAAAAACCAGAGAAAGACTGGTAA
Upstream 100 bases:
>100_bases TTTAGAAAGAAAAACAAACTGGATTAAAGAGTTGAATTTATTCAACGAAAAGAAATAAAGATTCCTTTTTAAAATCGGAA CAAAAAATAAAAAAAATAGA
Downstream 100 bases:
>100_bases AATAAGTTGAATCGTTTAATCGTTATTAATTTGTTTATCTATTAAACAATTTGGCGAATAAACGATTTAGCAGTTAAACA AACAATGATCAAACATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: BatC Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Aerotolerance-Related Protein BatC; BatB Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Repeat-Containing Protein; BatB/BatC Protein; Aerotolerance-Related Exported Protein BatC
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKNLLLYILLTLSFAAAAQEKDKTLPDANEEYKQNKFTEAEANYRISASKFSKRAAGSYNLGNSIYRQNQPSEAKYAYAN AIKRAKTRPEKHKAYHNLGNVFMKEKDYSQAVEAYKEALRNDPTDDETRYNYVYAKQKLKENPPKNDKNKDKNKDKDKDK DKNKDKDKDKDKNKDKDKDKDKKDDKGDKDKDKKDGKNDPKKDDKSDNKGEPKRMPGGISKERVQNLLDAVNNEEKKIQD KVNAQKVKPNTKKPEKDW
Sequences:
>Translated_258_residues MKNLLLYILLTLSFAAAAQEKDKTLPDANEEYKQNKFTEAEANYRISASKFSKRAAGSYNLGNSIYRQNQPSEAKYAYAN AIKRAKTRPEKHKAYHNLGNVFMKEKDYSQAVEAYKEALRNDPTDDETRYNYVYAKQKLKENPPKNDKNKDKNKDKDKDK DKNKDKDKDKDKNKDKDKDKDKKDDKGDKDKDKKDGKNDPKKDDKSDNKGEPKRMPGGISKERVQNLLDAVNNEEKKIQD KVNAQKVKPNTKKPEKDW >Mature_258_residues MKNLLLYILLTLSFAAAAQEKDKTLPDANEEYKQNKFTEAEANYRISASKFSKRAAGSYNLGNSIYRQNQPSEAKYAYAN AIKRAKTRPEKHKAYHNLGNVFMKEKDYSQAVEAYKEALRNDPTDDETRYNYVYAKQKLKENPPKNDKNKDKNKDKDKDK DKNKDKDKDKDKNKDKDKDKDKKDDKGDKDKDKKDGKNDPKKDDKSDNKGEPKRMPGGISKERVQNLLDAVNNEEKKIQD KVNAQKVKPNTKKPEKDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29932; Mature: 29932
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLLYILLTLSFAAAAQEKDKTLPDANEEYKQNKFTEAEANYRISASKFSKRAAGSYN CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEECHHHHHHHHCCCCC LGNSIYRQNQPSEAKYAYANAIKRAKTRPEKHKAYHNLGNVFMKEKDYSQAVEAYKEALR CCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NDPTDDETRYNYVYAKQKLKENPPKNDKNKDKNKDKDKDKDKNKDKDKDKDKNKDKDKDK CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCCCCCCCC DKKDDKGDKDKDKKDGKNDPKKDDKSDNKGEPKRMPGGISKERVQNLLDAVNNEEKKIQD CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH KVNAQKVKPNTKKPEKDW HHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKNLLLYILLTLSFAAAAQEKDKTLPDANEEYKQNKFTEAEANYRISASKFSKRAAGSYN CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEECHHHHHHHHCCCCC LGNSIYRQNQPSEAKYAYANAIKRAKTRPEKHKAYHNLGNVFMKEKDYSQAVEAYKEALR CCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NDPTDDETRYNYVYAKQKLKENPPKNDKNKDKNKDKDKDKDKNKDKDKDKDKNKDKDKDK CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCCCCCCCC DKKDDKGDKDKDKKDGKNDPKKDDKSDNKGEPKRMPGGISKERVQNLLDAVNNEEKKIQD CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH KVNAQKVKPNTKKPEKDW HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA