Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146298395

Identifier: 146298395

GI number: 146298395

Start: 692638

End: 693033

Strand: Direct

Name: 146298395

Synonym: Fjoh_0632

Alternate gene names: NA

Gene position: 692638-693033 (Clockwise)

Preceding gene: 146298394

Following gene: 146298399

Centisome position: 11.36

GC content: 34.34

Gene sequence:

>396_bases
ATGAGCACAGCAACAAAACCAAATCATATAGGGCGAAAAATAAGCCGTATTCGTGAACTTCGCGATATGAAGCAAGAAGC
TTTGGCACAAGCTTTAGGAACAAACCAGCAAGCTATTTCTACAATAGAAAATAGTGAAACTATAGACGAGGCAAAACTTA
TTGAAATAGCAAAAGCACTTGGTGTAACTCCAGAAGCTATAAAAAGTTTTTCGGAAGAAAATGTGTTTAATTATTTTAAC
ACATTCACAGATAGCCACGGAAATTTTGGAAATTTTGCCAGTGGAGCAATTTGCAATTTCAATCCTCTTGACAAAGTAGT
TGAACTTTATGAGCGTTTGGTTCAGGTTGAAAAAGATAAAGTTGAGTATTTAGAAAAATTAATGAAGGGGAAATAA

Upstream 100 bases:

>100_bases
TATTTTTACTTCTTTTAAACGCTAAATCGTATTTTACCAAAACAAGTCTGTTTTTTACTGAAAATGGATTTGTAAAAGTT
TTTTTAAATACCTTTGAATT

Downstream 100 bases:

>100_bases
GTCCTTTCTATTTATCATATAAAAAAGCCATTTCTAAAAACAGAATTGGCTTTTTGTTTTCTAACTAAGGAATTACTTTG
TGTTCGGGTAATCCCTACGG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Xin-Antitoxin System Antitoxin Component Xre Family; Transcriptional Regulator; HTH_3 Family Transcriptional Regulator Protein; Helix-Turn-Helix Domain Protein; XRE Family Plasmid Maintenance System Antidote Protein; Helix-TurN-Helix Domain Protein

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MSTATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKALGVTPEAIKSFSEENVFNYFN
TFTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDKVEYLEKLMKGK

Sequences:

>Translated_131_residues
MSTATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKALGVTPEAIKSFSEENVFNYFN
TFTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDKVEYLEKLMKGK
>Mature_130_residues
STATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKALGVTPEAIKSFSEENVFNYFNT
FTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDKVEYLEKLMKGK

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14728; Mature: 14597

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GVTPEAIKSFSEENVFNYFNTFTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VEYLEKLMKGK
HHHHHHHHCCC
>Mature Secondary Structure 
STATKPNHIGRKISRIRELRDMKQEALAQALGTNQQAISTIENSETIDEAKLIEIAKAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GVTPEAIKSFSEENVFNYFNTFTDSHGNFGNFASGAICNFNPLDKVVELYERLVQVEKDK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VEYLEKLMKGK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA