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The map label for this gene is occQ [H]

Identifier: 146284416

GI number: 146284416

Start: 4459277

End: 4459972

Strand: Direct

Name: occQ [H]

Synonym: PST_4105

Alternate gene names: 146284416

Gene position: 4459277-4459972 (Clockwise)

Preceding gene: 146284415

Following gene: 146284417

Centisome position: 97.63

GC content: 65.09

Gene sequence:

>696_bases
ATGATTCCTGACCTTCACGGATTCGGTCCGGCCCTGCTCGCCGGCACCTGGATGACCATCCAACTGGCCCTCGCCTCCCT
GGCGCTGGGGCTGGTGCTCGGCCTGCTCGGCGCGCTGGCCAAGACGTCGCCTTACAGCGCCCTGCGCTGGATCGGCGGCA
CCTACTCGACCATCGTGCGCGGCGTACCCGAATTGCTCTGGGTGCTGCTGATCTATTTCGGCACCATCAACCTGATTCGC
GGCCTTGGCGAACTGTTCGGCATCGCCAACCTGGCCCTGAGCCCGTTTGCCGCCGGCACCATCGCCCTCGGCCTGTGCTT
TGGCGCCTATGCCACCGAGGTGTTCCGCGGTGCGCTGCTGGCCATTCCCAAGGGCCATCGTGAAGCCGGCCTGGCACTGG
GCCTGGGCAAGCGCCGTATCTTCCTGCGGCTGATCCTGCCGCAGATGTGGCGCCTGGCCCTGCCGGGCCTCGGCAACCTG
TTCATGATCCTGATGAAGGACACCGCGCTGGTCTCGGTGATCGGTCTCGAGGAGATCATGCGCCGCTCGCAGATCGCGGT
GACCGCCAGTAAGGAACCCTTCACCTTCTTCCTGGTGGCGGCCTTCATTTACCTGTGCCTGACCATCGTTGCCATGATCG
GCATGCACTTCCTCGAAAAACGTGCCGGCCGCGGCTTCGTGCGGAGCGCAGCATGA

Upstream 100 bases:

>100_bases
ATCAACGACAAGTACTTCCCGTTCAGCATTTACTGATCCAACCGAGCCGAAGCCCGGTCGCCAGCCTTCTGGCCGACCGG
GCTTCGGTGTTTGAGCTTCT

Downstream 100 bases:

>100_bases
CCTGGGAAATCTTCATCAAATGGCTGCCGAGCTTCATCGACGGCGCCTGGCTGACCCTGCAACTGGTCGGCGTGTCGGTC
ATCACCGGACTGATCCTCGC

Product: amino acid ABC transporter, permease protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIPDLHGFGPALLAGTWMTIQLALASLALGLVLGLLGALAKTSPYSALRWIGGTYSTIVRGVPELLWVLLIYFGTINLIR
GLGELFGIANLALSPFAAGTIALGLCFGAYATEVFRGALLAIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNL
FMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFFLVAAFIYLCLTIVAMIGMHFLEKRAGRGFVRSAA

Sequences:

>Translated_231_residues
MIPDLHGFGPALLAGTWMTIQLALASLALGLVLGLLGALAKTSPYSALRWIGGTYSTIVRGVPELLWVLLIYFGTINLIR
GLGELFGIANLALSPFAAGTIALGLCFGAYATEVFRGALLAIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNL
FMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFFLVAAFIYLCLTIVAMIGMHFLEKRAGRGFVRSAA
>Mature_231_residues
MIPDLHGFGPALLAGTWMTIQLALASLALGLVLGLLGALAKTSPYSALRWIGGTYSTIVRGVPELLWVLLIYFGTINLIR
GLGELFGIANLALSPFAAGTIALGLCFGAYATEVFRGALLAIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNL
FMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFFLVAAFIYLCLTIVAMIGMHFLEKRAGRGFVRSAA

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=43.1818181818182, Blast_Score=180, Evalue=8e-47,
Organism=Escherichia coli, GI1788646, Length=225, Percent_Identity=40.8888888888889, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=36.1111111111111, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=35.8490566037736, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=30.9859154929577, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1788645, Length=230, Percent_Identity=29.1304347826087, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786873, Length=217, Percent_Identity=25.8064516129032, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082239, Length=216, Percent_Identity=31.0185185185185, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=26.046511627907, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24831; Mature: 24831

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPDLHGFGPALLAGTWMTIQLALASLALGLVLGLLGALAKTSPYSALRWIGGTYSTIVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
GVPELLWVLLIYFGTINLIRGLGELFGIANLALSPFAAGTIALGLCFGAYATEVFRGALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLEEIM
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRSQIAVTASKEPFTFFLVAAFIYLCLTIVAMIGMHFLEKRAGRGFVRSAA
HHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MIPDLHGFGPALLAGTWMTIQLALASLALGLVLGLLGALAKTSPYSALRWIGGTYSTIVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
GVPELLWVLLIYFGTINLIRGLGELFGIANLALSPFAAGTIALGLCFGAYATEVFRGALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLEEIM
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRSQIAVTASKEPFTFFLVAAFIYLCLTIVAMIGMHFLEKRAGRGFVRSAA
HHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA