| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is artJ [H]
Identifier: 146284415
GI number: 146284415
Start: 4458457
End: 4459212
Strand: Direct
Name: artJ [H]
Synonym: PST_4104
Alternate gene names: 146284415
Gene position: 4458457-4459212 (Clockwise)
Preceding gene: 146284414
Following gene: 146284416
Centisome position: 97.61
GC content: 58.86
Gene sequence:
>756_bases ATGAAGAGCTATAAGAAGATCCTGCTGACCGCTGCTGCCTCGCTGATCATCGGCACCCAGGCATTCGCGGCGGAAAAACT ACGGATTGGTACCGAAGGCGCCTACCCACCCTTCAACCTGATCGACGCCAGCGGCAAGGTGGTCGGCTTCGATCTGGATA TCTCCCACGCGCTGTGCGCCAAGATGAAGGTCGAGTGCGAGGTGGTTACCTCTGATTGGGACGGCATCATTCCGGCGCTG AACGCCGGCAAGTTCGACTTCCTCGCCGCCTCCATGTCGGTCACCGAAGAGCGCAAGAACGCCGTCGACTTCACCGACCA CTACTACACCAACAAGCTGCAGTTCGTGGCGCCGAAGAACGTCGACTTCAAGACCGACGAGAGCTACCTGAAAGGCAAAG TGATCGGTGCGCAGCGCGCGACCATCGCCGGCACCTGGCTGGAAGACAACCTGGATCGCGTCGTCGACATCAAGCTCTAC GACACCCAGGAAAACGCCTATCTGGACCTGGCCTCCGGTCGCGTCGACGGCATCCTGGCTGACACCTTCGTGCAGTGGGA ATGGCTCAAGAGCGATGCCGGCAAGAACTTCGAGTTCAAGGGCGAGCCGGTATTCGATGACGACAAGATCGCCATCGCCG TGCGCAAGGGCAACGATGAACTGCGCGAGCGGCTGAACAAGGCATTGGCGGAGATCATCGCTGACGGCACCTACAAGCAG ATCAACGACAAGTACTTCCCGTTCAGCATTTACTGA
Upstream 100 bases:
>100_bases TGGTCGAGGAGCAGGGAACGCCCGAGCAGGTATTTGACAATCCTCAATCGGCGCGCTGTAAACAATTCATGTCCAGCCAT CGCTAATGGAGCAACACCGC
Downstream 100 bases:
>100_bases TCCAACCGAGCCGAAGCCCGGTCGCCAGCCTTCTGGCCGACCGGGCTTCGGTGTTTGAGCTTCTATGATTCCTGACCTTC ACGGATTCGGTCCGGCCCTG
Product: periplasmic binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKSYKKILLTAAASLIIGTQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCAKMKVECEVVTSDWDGIIPAL NAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKNVDFKTDESYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLY DTQENAYLDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGTYKQ INDKYFPFSIY
Sequences:
>Translated_251_residues MKSYKKILLTAAASLIIGTQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCAKMKVECEVVTSDWDGIIPAL NAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKNVDFKTDESYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLY DTQENAYLDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGTYKQ INDKYFPFSIY >Mature_251_residues MKSYKKILLTAAASLIIGTQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCAKMKVECEVVTSDWDGIIPAL NAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKNVDFKTDESYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLY DTQENAYLDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGTYKQ INDKYFPFSIY
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=246, Percent_Identity=41.0569105691057, Blast_Score=175, Evalue=2e-45, Organism=Escherichia coli, GI1787088, Length=248, Percent_Identity=39.1129032258064, Blast_Score=166, Evalue=1e-42, Organism=Escherichia coli, GI1788648, Length=234, Percent_Identity=37.1794871794872, Blast_Score=164, Evalue=6e-42, Organism=Escherichia coli, GI1788649, Length=263, Percent_Identity=37.6425855513308, Blast_Score=161, Evalue=4e-41, Organism=Escherichia coli, GI1787031, Length=248, Percent_Identity=34.2741935483871, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1788228, Length=222, Percent_Identity=31.981981981982, Blast_Score=124, Evalue=7e-30,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28007; Mature: 28007
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYKKILLTAAASLIIGTQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCA CCHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCCCCEEEECCCCEEEEECCCHHHHHH KMKVECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKN CEEEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCEECCEEEEEECCC VDFKTDESYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLYDTQENAYLDLASGRVDGILA CCCCCCCHHHCEEEECCCCEEEEEEHHHCCCCEEEEEEEEECCCCEEEEECCCCCCCEEE DTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGTYKQ HHHEEEEEECCCCCCCCEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH INDKYFPFSIY CCCCCCCEEEC >Mature Secondary Structure MKSYKKILLTAAASLIIGTQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCA CCHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCCCCEEEECCCCEEEEECCCHHHHHH KMKVECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKN CEEEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCEECCEEEEEECCC VDFKTDESYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLYDTQENAYLDLASGRVDGILA CCCCCCCHHHCEEEECCCCEEEEEEHHHCCCCEEEEEEEEECCCCEEEEECCCCCCCEEE DTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGTYKQ HHHEEEEEECCCCCCCCEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH INDKYFPFSIY CCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]