| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is arcC-2 [H]
Identifier: 146284292
GI number: 146284292
Start: 4316182
End: 4317111
Strand: Direct
Name: arcC-2 [H]
Synonym: PST_3980
Alternate gene names: 146284292
Gene position: 4316182-4317111 (Clockwise)
Preceding gene: 146284291
Following gene: 146284298
Centisome position: 94.5
GC content: 67.85
Gene sequence:
>930_bases ATGCGCATCGTCATCGCGCTGGGCGGCAATGCCCTGCTTCGCCGAGGGGAGCCGCTGAGCGCCGAGAATCAGCGAGAGAA CATCCGCCGGGCCTGCGCACAGATCGCGCGGATCGCACCGGGCAACGAACTGGTGGTGGCCCACGGCAACGGCCCGCAGG TCGGGCTACTGGCCCTGCAGGGGGCCGCCTACAAGGACGTACCCAGCTATCCGCTGGACGTCTTGGGGGCCGAAACCGAG GGCATGATCGGCTACATCATCGAGCAGGAGCTGGGCAATGTGCTGCCATTCGAGGTGCCCTTCGCCACCCTGCTGACACA GGTCGAAGTGGATCCACAGGATCCGGCCTTCCAGGCGCCAAGCAAACCGATCGGCCCGGTCTACGGACGCGAAGAGGCAC AGCGTCTGGCCGAACAACGGGGCTGGAGCATTGCGCCGGACGGCGACCATTTCCGCCGCGTGGTGCCCAGCCCGCGGCCG AAGCGGATCTTCGAGATCAGGCCGATCAGCTGGCTGCTGGAGAAGGGCAGCGTGGTGATCTGTGCCGGCGGCGGTGGCAT TCCGACCGTCTACGACCAGCACGGACGGCTGCAAGGGGTCGAGGCGGTGATCGACAAGGACCTGTGTTCAGCGCTGCTGG CCGAGCAGCTCGCCGCCGACCTGCTGGTGATCGCGACCGATGTCGACGGCGCCTACCTGGACTGGGGCACCCCGCAGCAG CGGCGGATCGCCGAAGCCCACCCAGACCGACTGCAAGGCCTGGGTTTCGCTGCCGGCTCCATGGGACCGAAGATCGAAGC GGCCTGCCAGTTCGCACGCAATACCGGCAAGGTCGCGGTGATCGGCTCGCTCGAACAGATCGAGGCCATTGTCCGCGGCG CAGCCGGTACCCGCGTCAGCCTGGCGGCCGCAGGCCTGTGCCAGGCGTGA
Upstream 100 bases:
>100_bases GCGGAGAACCGCATGCACACCATCAAGGCGATCCTGGTCTCCACCCTCGCCGACATCTGACGTGACCGGCGCCCGTGATG GGCGCCCTGGAGAAACCGAC
Downstream 100 bases:
>100_bases AAAAGCAAAGGGCGCCAGTGGCGCCCTTCGTTTACCCCGGTGATCCTCAGTTGCCGCGACGCAGCGCCTGCGGCGAGAAA TCGCGTGGGCCGAGCTTCAC
Product: carbamate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MRIVIALGGNALLRRGEPLSAENQRENIRRACAQIARIAPGNELVVAHGNGPQVGLLALQGAAYKDVPSYPLDVLGAETE GMIGYIIEQELGNVLPFEVPFATLLTQVEVDPQDPAFQAPSKPIGPVYGREEAQRLAEQRGWSIAPDGDHFRRVVPSPRP KRIFEIRPISWLLEKGSVVICAGGGGIPTVYDQHGRLQGVEAVIDKDLCSALLAEQLAADLLVIATDVDGAYLDWGTPQQ RRIAEAHPDRLQGLGFAAGSMGPKIEAACQFARNTGKVAVIGSLEQIEAIVRGAAGTRVSLAAAGLCQA
Sequences:
>Translated_309_residues MRIVIALGGNALLRRGEPLSAENQRENIRRACAQIARIAPGNELVVAHGNGPQVGLLALQGAAYKDVPSYPLDVLGAETE GMIGYIIEQELGNVLPFEVPFATLLTQVEVDPQDPAFQAPSKPIGPVYGREEAQRLAEQRGWSIAPDGDHFRRVVPSPRP KRIFEIRPISWLLEKGSVVICAGGGGIPTVYDQHGRLQGVEAVIDKDLCSALLAEQLAADLLVIATDVDGAYLDWGTPQQ RRIAEAHPDRLQGLGFAAGSMGPKIEAACQFARNTGKVAVIGSLEQIEAIVRGAAGTRVSLAAAGLCQA >Mature_309_residues MRIVIALGGNALLRRGEPLSAENQRENIRRACAQIARIAPGNELVVAHGNGPQVGLLALQGAAYKDVPSYPLDVLGAETE GMIGYIIEQELGNVLPFEVPFATLLTQVEVDPQDPAFQAPSKPIGPVYGREEAQRLAEQRGWSIAPDGDHFRRVVPSPRP KRIFEIRPISWLLEKGSVVICAGGGGIPTVYDQHGRLQGVEAVIDKDLCSALLAEQLAADLLVIATDVDGAYLDWGTPQQ RRIAEAHPDRLQGLGFAAGSMGPKIEAACQFARNTGKVAVIGSLEQIEAIVRGAAGTRVSLAAAGLCQA
Specific function: Arginine degradation via arginine deiminase; third step. [C]
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786732, Length=299, Percent_Identity=53.8461538461538, Blast_Score=298, Evalue=3e-82, Organism=Escherichia coli, GI1789238, Length=311, Percent_Identity=40.1929260450161, Blast_Score=181, Evalue=4e-47, Organism=Escherichia coli, GI1786516, Length=309, Percent_Identity=41.747572815534, Blast_Score=169, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 32857; Mature: 32857
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVIALGGNALLRRGEPLSAENQRENIRRACAQIARIAPGNELVVAHGNGPQVGLLALQ CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEC GAAYKDVPSYPLDVLGAETEGMIGYIIEQELGNVLPFEVPFATLLTQVEVDPQDPAFQAP CCCCCCCCCCCHHHCCCCCCCHHHHEEHHHHCCCCCCCCCHHHHHHEEECCCCCCCCCCC SKPIGPVYGREEAQRLAEQRGWSIAPDGDHFRRVVPSPRPKRIFEIRPISWLLEKGSVVI CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEECCHHHHHCCCCEEE CAGGGGIPTVYDQHGRLQGVEAVIDKDLCSALLAEQLAADLLVIATDVDGAYLDWGTPQQ EECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCHH RRIAEAHPDRLQGLGFAAGSMGPKIEAACQFARNTGKVAVIGSLEQIEAIVRGAAGTRVS HHHHHCCHHHHHCCCEECCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCEEE LAAAGLCQA HHHHCCCCC >Mature Secondary Structure MRIVIALGGNALLRRGEPLSAENQRENIRRACAQIARIAPGNELVVAHGNGPQVGLLALQ CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEC GAAYKDVPSYPLDVLGAETEGMIGYIIEQELGNVLPFEVPFATLLTQVEVDPQDPAFQAP CCCCCCCCCCCHHHCCCCCCCHHHHEEHHHHCCCCCCCCCHHHHHHEEECCCCCCCCCCC SKPIGPVYGREEAQRLAEQRGWSIAPDGDHFRRVVPSPRPKRIFEIRPISWLLEKGSVVI CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEECCHHHHHCCCCEEE CAGGGGIPTVYDQHGRLQGVEAVIDKDLCSALLAEQLAADLLVIATDVDGAYLDWGTPQQ EECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCHH RRIAEAHPDRLQGLGFAAGSMGPKIEAACQFARNTGKVAVIGSLEQIEAIVRGAAGTRVS HHHHHCCHHHHHCCCEECCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCEEE LAAAGLCQA HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2537202; 10984043 [H]