| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is arcA-2 [H]
Identifier: 146284290
GI number: 146284290
Start: 4313823
End: 4315079
Strand: Direct
Name: arcA-2 [H]
Synonym: PST_3978
Alternate gene names: 146284290
Gene position: 4313823-4315079 (Clockwise)
Preceding gene: 146284289
Following gene: 146284291
Centisome position: 94.45
GC content: 66.59
Gene sequence:
>1257_bases ATGACTCAGCAACCAACGAAACTGGGCGTCCATTCCGAGGCGGGCAAGCTGCGCAAGGTGATGGTCTGCTCGCCCGGCCT CGCCCACCAGCGCCTGACGCCGAGCAACTGCGACGAGCTGCTGTTCGACGACGTGCTCTGGGTCAACCAGGCCAAGCGCG ATCATTTCGACTTCGTCACCAAGATGCGCGAGCGCGGCGTCGAGGTGCTGGAAATGCACAACCTGCTGACCGAGACGGTG AGCAATCCGGTGGCGCTGAAGTGGATTCTCGACCGCAAGATCACCGCCAACCAGGTCGGCATAGGCCTGCAGGACGAGGT ACGTAGCTGGCTCGAAGAACAGCAGCCCCGGCAACTTGCCGAATTCCTGATCGGAGGGGTGTCCGGCAGCGACATTCCGG GCACCCGCAGCGGCGAAATCGTCAGCCTGTTCCGCGACTATCTGGGCCACTCGAGCTTCATCCTGCCGCCGCTGCCCAAC ACCCTGTTCACCCGCGATACCAGCTGCTGGATCTACGGCGGTGTATCGCTCAACCCGATGCACTGGACCGCGCGCCGCCA GGAAACCCTGCTCGCGGCCGCGATCTACCGCTTCCATCCGCAGTTCGCCGGCCAGGACTTCAAGGTCTGGTACGGCGACC CCGAGCTCGACCACGGTCTGGCCACGCTCGAAGGCGGCGACGTGATGCCGATCGGCAAGGGCGTGGTGCTGGTCGGCATG GGCGAGCGCAGCTCGCGGCAGGCCATCGGCCAGTTGGCGCAGTCGCTGTTCCGCCACGGCGCGGCCGAGCGCGTGATCGT CGCCGGCCTGCCGCGTTCCCGCTCGGCGATGCACCTGGATACGGTGTTCAGCTTCTGCGATCGCGACCTGGTGACCATCT ACCCCGACGTGGTGCACGGCATCGTCGCGTTCAGCCTGCGCCCCGACGAAAGCAAACCCGGCGGCATCGACCTGCGCCGG GAAAAGGCCAGCTTCCTCCAGGTGGTCGCCGAAGCCCTCGGCCTGCCCGCCCTGCGAGTGGTGGAAACCGGCGGCGACAG CTACGAGGTGGAGCGTGAGCAGTGGGACGACGGCAACAACGTGGTCGCCCTTGAACCCGGGGTGGTCATCGGCTACGACC GCAACACCTTCACCAACACACAGCTGCGCAAGGCCGGGGTGGAGGTCATCACCATCAGCGCCAGCGAACTGGGCCGTGGT CGCGGCGGCGGCCACTGCATGACCTGCCCGATCGCGCGCGACGCGCTCGACTCCTGA
Upstream 100 bases:
>100_bases TCCCTCTGACCGGCGCCCCGGCGCCCTCTCTCGCCAAGGCCACAAGCGACGGCGAGCCACTCTGCACCTACCGGTGCAAT GACTGACGGAGGCAAATGCC
Downstream 100 bases:
>100_bases TCACCGCGCCGGGCCCACCCCGGCAAACCGACATTGCGGAGGACTCACCCCATGGCCTTCAACATTCACAACCGCAGCCT GCTCAGCCTGATGCACCACA
Product: arginine deiminase
Products: NA
Alternate protein names: ADI; Arginine dihydrolase; AD [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTQQPTKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVLWVNQAKRDHFDFVTKMRERGVEVLEMHNLLTETV SNPVALKWILDRKITANQVGIGLQDEVRSWLEEQQPRQLAEFLIGGVSGSDIPGTRSGEIVSLFRDYLGHSSFILPPLPN TLFTRDTSCWIYGGVSLNPMHWTARRQETLLAAAIYRFHPQFAGQDFKVWYGDPELDHGLATLEGGDVMPIGKGVVLVGM GERSSRQAIGQLAQSLFRHGAAERVIVAGLPRSRSAMHLDTVFSFCDRDLVTIYPDVVHGIVAFSLRPDESKPGGIDLRR EKASFLQVVAEALGLPALRVVETGGDSYEVEREQWDDGNNVVALEPGVVIGYDRNTFTNTQLRKAGVEVITISASELGRG RGGGHCMTCPIARDALDS
Sequences:
>Translated_418_residues MTQQPTKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVLWVNQAKRDHFDFVTKMRERGVEVLEMHNLLTETV SNPVALKWILDRKITANQVGIGLQDEVRSWLEEQQPRQLAEFLIGGVSGSDIPGTRSGEIVSLFRDYLGHSSFILPPLPN TLFTRDTSCWIYGGVSLNPMHWTARRQETLLAAAIYRFHPQFAGQDFKVWYGDPELDHGLATLEGGDVMPIGKGVVLVGM GERSSRQAIGQLAQSLFRHGAAERVIVAGLPRSRSAMHLDTVFSFCDRDLVTIYPDVVHGIVAFSLRPDESKPGGIDLRR EKASFLQVVAEALGLPALRVVETGGDSYEVEREQWDDGNNVVALEPGVVIGYDRNTFTNTQLRKAGVEVITISASELGRG RGGGHCMTCPIARDALDS >Mature_417_residues TQQPTKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVLWVNQAKRDHFDFVTKMRERGVEVLEMHNLLTETVS NPVALKWILDRKITANQVGIGLQDEVRSWLEEQQPRQLAEFLIGGVSGSDIPGTRSGEIVSLFRDYLGHSSFILPPLPNT LFTRDTSCWIYGGVSLNPMHWTARRQETLLAAAIYRFHPQFAGQDFKVWYGDPELDHGLATLEGGDVMPIGKGVVLVGMG ERSSRQAIGQLAQSLFRHGAAERVIVAGLPRSRSAMHLDTVFSFCDRDLVTIYPDVVHGIVAFSLRPDESKPGGIDLRRE KASFLQVVAEALGLPALRVVETGGDSYEVEREQWDDGNNVVALEPGVVIGYDRNTFTNTQLRKAGVEVITISASELGRGR GGGHCMTCPIARDALDS
Specific function: Unknown
COG id: COG2235
COG function: function code E; Arginine deiminase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003198 - InterPro: IPR003876 [H]
Pfam domain/function: PF02274 Amidinotransf [H]
EC number: =3.5.3.6 [H]
Molecular weight: Translated: 46098; Mature: 45967
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQPTKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVLWVNQAKRDHFDFVT CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH KMRERGVEVLEMHNLLTETVSNPVALKWILDRKITANQVGIGLQDEVRSWLEEQQPRQLA HHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEHHHCCCCCHHHHHHHHHHCCHHHHH EFLIGGVSGSDIPGTRSGEIVSLFRDYLGHSSFILPPLPNTLFTRDTSCWIYGGVSLNPM HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHEECCCCEEEEECCEECCC HWTARRQETLLAAAIYRFHPQFAGQDFKVWYGDPELDHGLATLEGGDVMPIGKGVVLVGM CCHHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCEEEECCCCEEEECCCEEEEEC GERSSRQAIGQLAQSLFRHGAAERVIVAGLPRSRSAMHLDTVFSFCDRDLVTIYPDVVHG CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECHHHHHH IVAFSLRPDESKPGGIDLRREKASFLQVVAEALGLPALRVVETGGDSYEVEREQWDDGNN HHEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHCCCCCC VVALEPGVVIGYDRNTFTNTQLRKAGVEVITISASELGRGRGGGHCMTCPIARDALDS EEEECCCEEEECCCCCCCCCHHHHCCCEEEEEEHHHCCCCCCCCEEEECCCCHHCCCC >Mature Secondary Structure TQQPTKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVLWVNQAKRDHFDFVT CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH KMRERGVEVLEMHNLLTETVSNPVALKWILDRKITANQVGIGLQDEVRSWLEEQQPRQLA HHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEHHHCCCCCHHHHHHHHHHCCHHHHH EFLIGGVSGSDIPGTRSGEIVSLFRDYLGHSSFILPPLPNTLFTRDTSCWIYGGVSLNPM HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHEECCCCEEEEECCEECCC HWTARRQETLLAAAIYRFHPQFAGQDFKVWYGDPELDHGLATLEGGDVMPIGKGVVLVGM CCHHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCEEEECCCCEEEECCCEEEEEC GERSSRQAIGQLAQSLFRHGAAERVIVAGLPRSRSAMHLDTVFSFCDRDLVTIYPDVVHG CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECHHHHHH IVAFSLRPDESKPGGIDLRREKASFLQVVAEALGLPALRVVETGGDSYEVEREQWDDGNN HHEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHCCCCCC VVALEPGVVIGYDRNTFTNTQLRKAGVEVITISASELGRGRGGGHCMTCPIARDALDS EEEECCCEEEECCCCCCCCCHHHHCCCEEEEEEHHHCCCCCCCCEEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2537202; 10984043; 2158926 [H]