| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yeaO [H]
Identifier: 146283872
GI number: 146283872
Start: 3843707
End: 3844126
Strand: Direct
Name: yeaO [H]
Synonym: PST_3555
Alternate gene names: 146283872
Gene position: 3843707-3844126 (Clockwise)
Preceding gene: 146283856
Following gene: 146283875
Centisome position: 84.15
GC content: 68.1
Gene sequence:
>420_bases ATGATTCAGTGCAAACGCGCCTATGCACCCGCCAAGGCCACGGACGGCCGCCGGATACTGGTCGACCGGCTATGGCCGCG GGGCTGCGATCGTCAAGGATTGGCGCTGGAAGCCTGGCTGGCGGATCTGGCGCCATCGACCGAGCTGCGCAGGGCGTTCA AGAACGGCACGCTGAACTTCGCCGAGTTCCGCCGGCGCTACCGCAGCGAGCTGGCGGCGCATCCGGAGCACTGGTGGCCA CTGCTGGAGATGGCCGAAGGGGGCACCCTGACGCTGGTCTACGCGGCTCGGGATGAGCACGAGAACAACGCACGGGTACT GGCCGAATGGCTGGAGCAGGAGGGTGAGCGGCTGAACCGCCCGAGCTCGCCGGCCTGCATGGCCGGCGAGTTCGATCGCG GCCTCAGCGGCGACGATTGA
Upstream 100 bases:
>100_bases AATCGCATAGGGTTTGATTGACCCTTTCACCAGTAAAATAAACCACACCTCAGCGAACGAGCGGTCTAGGCTGGATTACC GATAACGAGGAGGTCTGGTG
Downstream 100 bases:
>100_bases CCGTCATCGCGGCGCGAATCAGGTCCGCACCGATTTCGGCCTCGTAGGTTTTCCATACCGGCAGCATCTGCTCGCGCCAG GCCTGGCGTTCTTCCGGCGT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MIQCKRAYAPAKATDGRRILVDRLWPRGCDRQGLALEAWLADLAPSTELRRAFKNGTLNFAEFRRRYRSELAAHPEHWWP LLEMAEGGTLTLVYAARDEHENNARVLAEWLEQEGERLNRPSSPACMAGEFDRGLSGDD
Sequences:
>Translated_139_residues MIQCKRAYAPAKATDGRRILVDRLWPRGCDRQGLALEAWLADLAPSTELRRAFKNGTLNFAEFRRRYRSELAAHPEHWWP LLEMAEGGTLTLVYAARDEHENNARVLAEWLEQEGERLNRPSSPACMAGEFDRGLSGDD >Mature_139_residues MIQCKRAYAPAKATDGRRILVDRLWPRGCDRQGLALEAWLADLAPSTELRRAFKNGTLNFAEFRRRYRSELAAHPEHWWP LLEMAEGGTLTLVYAARDEHENNARVLAEWLEQEGERLNRPSSPACMAGEFDRGLSGDD
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3073c [H]
Homologues:
Organism=Escherichia coli, GI87081976, Length=110, Percent_Identity=50, Blast_Score=117, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007438 [H]
Pfam domain/function: PF04343 DUF488 [H]
EC number: NA
Molecular weight: Translated: 15854; Mature: 15854
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQCKRAYAPAKATDGRRILVDRLWPRGCDRQGLALEAWLADLAPSTELRRAFKNGTLNF CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCH AEFRRRYRSELAAHPEHWWPLLEMAEGGTLTLVYAARDEHENNARVLAEWLEQEGERLNR HHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC PSSPACMAGEFDRGLSGDD CCCCCEECCCCCCCCCCCC >Mature Secondary Structure MIQCKRAYAPAKATDGRRILVDRLWPRGCDRQGLALEAWLADLAPSTELRRAFKNGTLNF CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCH AEFRRRYRSELAAHPEHWWPLLEMAEGGTLTLVYAARDEHENNARVLAEWLEQEGERLNR HHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC PSSPACMAGEFDRGLSGDD CCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]