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The map label for this gene is nirY [C]

Identifier: 146283856

GI number: 146283856

Start: 3826634

End: 3827353

Strand: Direct

Name: nirY [C]

Synonym: PST_3539

Alternate gene names: 146283856

Gene position: 3826634-3827353 (Clockwise)

Preceding gene: 146283855

Following gene: 146283872

Centisome position: 83.78

GC content: 66.81

Gene sequence:

>720_bases
GTGCGCAATCGGGCCGGGGCGCGGCTGACCGATGACGGTCAGCGCTTCGTCGCCTATGCCACTCAGCTGGTGCAGACCTG
GGAAGCCGCGCGGCGCGACCTGCCGTTGTCGCAGAGCGGTGACAAGCTGCTGACCCTCGGCTCCGAGGTGAGCCTGTGCA
ACCCGCTGATGCTGGCCTGGGCCCAGCGCCTGCGACAGGGGTTGGCCAGCCATGCGATACGGCTGGAAGTGGCCAGTGGC
GAAGAGCTGCAGAAGAAGCTCGACCTGGGCGTGCTGGACGCCGCGCTGGTGCACCAGCCGGAGTACTGGCCGAGCCTGCA
GGTCGAGCAGCTGCTGGAAGAAAAGCTGATCCAGGTGGTGCAGACGCAGAACCCGGCGCCCTACCTGTACGTGGACTGGG
GGCCGGCGTTTCGCAAGCAGCACAACCAGGCGCTGCCCGAATGCAGTCGCGCGGCGCTGTCGTTCAGTCTCGGGCCGCTG
GCCCTGCAATACCTGGTGCAGTGCGGCGGGCGTGGCTATTTCCGCACCCGCGTCGTGCAGCGCTATCTGGACGAGGGAAT
TCTCAAGCGGGTGGAACAGGCGCCGGAGTTTTCCTACCCGATCTATCTGGTCCATGCCCGAGCCAGCGAGTCGCCGGCCC
TGACCAAGGCCATCGAGCTGCTGCGCGAGATCGCCCTGGACGACTACGACTGGTCGCGCTGGTACTACGCGGAGCTATGA

Upstream 100 bases:

>100_bases
CGGCAGCTTCATCGCCACCGCCGAACGCCTGCACATCACCCAGACGGCGGTGACCGCACGGGTGCACAACCTCGAGGAGC
AGCTGGGTTGCCGGCTGTTC

Downstream 100 bases:

>100_bases
AGCGGGACGCGCGCTGGCGTGGATCGAGCGTTCCGGCAGCGCTCAGTCCGGCAACTGTTTGAGCCAGTTGCGGTACAGCG
CGGCGATCAGGTCGGTCTGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator Of LysR Family Protein; HTH-Type Transcriptional Regulator LysR Family; HTH-Type Transcriptional Regulator; LysR Family Transcriptional Regulator Protein; Transcription Regulator Protein; Regulatory Protein LysR

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRNRAGARLTDDGQRFVAYATQLVQTWEAARRDLPLSQSGDKLLTLGSEVSLCNPLMLAWAQRLRQGLASHAIRLEVASG
EELQKKLDLGVLDAALVHQPEYWPSLQVEQLLEEKLIQVVQTQNPAPYLYVDWGPAFRKQHNQALPECSRAALSFSLGPL
ALQYLVQCGGRGYFRTRVVQRYLDEGILKRVEQAPEFSYPIYLVHARASESPALTKAIELLREIALDDYDWSRWYYAEL

Sequences:

>Translated_239_residues
MRNRAGARLTDDGQRFVAYATQLVQTWEAARRDLPLSQSGDKLLTLGSEVSLCNPLMLAWAQRLRQGLASHAIRLEVASG
EELQKKLDLGVLDAALVHQPEYWPSLQVEQLLEEKLIQVVQTQNPAPYLYVDWGPAFRKQHNQALPECSRAALSFSLGPL
ALQYLVQCGGRGYFRTRVVQRYLDEGILKRVEQAPEFSYPIYLVHARASESPALTKAIELLREIALDDYDWSRWYYAEL
>Mature_239_residues
MRNRAGARLTDDGQRFVAYATQLVQTWEAARRDLPLSQSGDKLLTLGSEVSLCNPLMLAWAQRLRQGLASHAIRLEVASG
EELQKKLDLGVLDAALVHQPEYWPSLQVEQLLEEKLIQVVQTQNPAPYLYVDWGPAFRKQHNQALPECSRAALSFSLGPL
ALQYLVQCGGRGYFRTRVVQRYLDEGILKRVEQAPEFSYPIYLVHARASESPALTKAIELLREIALDDYDWSRWYYAEL

Specific function: Could be the regulatory protein for phosphatidylserine synthetase [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27201; Mature: 27201

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRAGARLTDDGQRFVAYATQLVQTWEAARRDLPLSQSGDKLLTLGSEVSLCNPLMLAW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH
AQRLRQGLASHAIRLEVASGEELQKKLDLGVLDAALVHQPEYWPSLQVEQLLEEKLIQVV
HHHHHHHHHHHEEEEEECCCHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QTQNPAPYLYVDWGPAFRKQHNQALPECSRAALSFSLGPLALQYLVQCGGRGYFRTRVVQ
HCCCCCCEEEEECCHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHH
RYLDEGILKRVEQAPEFSYPIYLVHARASESPALTKAIELLREIALDDYDWSRWYYAEL
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECC
>Mature Secondary Structure
MRNRAGARLTDDGQRFVAYATQLVQTWEAARRDLPLSQSGDKLLTLGSEVSLCNPLMLAW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH
AQRLRQGLASHAIRLEVASGEELQKKLDLGVLDAALVHQPEYWPSLQVEQLLEEKLIQVV
HHHHHHHHHHHEEEEEECCCHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QTQNPAPYLYVDWGPAFRKQHNQALPECSRAALSFSLGPLALQYLVQCGGRGYFRTRVVQ
HCCCCCCEEEEECCHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHH
RYLDEGILKRVEQAPEFSYPIYLVHARASESPALTKAIELLREIALDDYDWSRWYYAEL
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA