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The map label for this gene is ndpA [C]

Identifier: 146283399

GI number: 146283399

Start: 3301293

End: 3302414

Strand: Direct

Name: ndpA [C]

Synonym: PST_3070

Alternate gene names: 146283399

Gene position: 3301293-3302414 (Clockwise)

Preceding gene: 146283395

Following gene: 146283400

Centisome position: 72.28

GC content: 62.3

Gene sequence:

>1122_bases
ATGCGATCCCCGACATTGATCCGTGTCCGCTACCCTGAGCAGAACCGACAAGCGCTCATGCCCGTGCTCTCGGGTAAACT
GCCGCTCCTGTTGCATTCAGCCCGCGAGTTCGCCATGCCCATCCGTCACTGCATCGTCCACCTGATCGAGAAAAAACCGG
ACGGCACACCTGCCGTTCTCCACGCCCGCGATTCGGAGCTGGGCGAATCGCAGGCCATGGAGAACCTGCTGGCGGACCTC
AACGAAAGCTACAACGCCAAGCAGGGCAAGGCCTGGGGCTTCTTCCACGGCGAATCCGGCGCCTATCCGTTCAGCGGCTG
GCTGGCGCAATACATGGAAGGCATTCAGGACTTCACCGCCTTCAGCCGCCAGGCCGTGGAACACCTGCAGAAGCTGATGG
AAGAGTCCAATCTGTCCACCGGTGGTCACGTGCTGTTCGCCCACTACCAGCAGGGCATGACCGACTACCTGGCCATCGCC
CTGCTGCATCACAGCGAAGGCGTGGCGGTGACCGAGTCGCTGGATGTGGCGCCAGCCAAGCATCTGGATCTGGGCCAGCT
GCATCTGGCAGCACGCATCAACATTTCCGAGTGGCAGAACAACAAGCAGTCGAAGCAGTACATCTCCTTCATCAAGGGCA
AGAACGGCAAGAAGGTCTCCGAGTACTTCCGCGATTTCATCGGCTGCCAGGAGGGCGTCGATGCCCCCGGCGAGACGCGC
ACCCTGCTCAAGGCGTTCAGCGACTACGTGGAGAGCGAGGACCTGCCGGAGGAGCAGGCCCGCGAAAAGACCTCGGCATT
GGTGGACTACGCCAGCACCCAGGCCAAGCTCGGCGAGCCGATCACCCTCGAGGAACTGTCCGGGGTGATCGACGAGGACC
GGCCGCGGGCCTTCTACGAGCACATCCGTAACAAGGATTACGGCCTGTCGCCGGAGATCCCGCCGGACAAGCGCACCCTC
AACCAGTTCCGCCGCTTCACCGGCCGCGCCGAGGGGTTGTCGATCAGCTTCGAATCGCACCTGCTGGGCTCGAAGATCGA
ATACGACGAGGACCGCGACATGCTGATCATTCGCCAGCTGCCCACCCAGCTCAAGGATCAGCTCAAGCGCCGCAAGGACT
GA

Upstream 100 bases:

>100_bases
AAGGAGGAAACGCCCACGCGCGACGCCCAACCAGGCCCGGAATTCACTGTTCACATGCCATACCCCGCAAAGCTCGATGC
AGTCAGCAGGCTAGCGCTGC

Downstream 100 bases:

>100_bases
ACCCACCATGCGCCTGCCGGACAGCCTGCTCGATGACTGCCTGTGCGACCCCAGCGCCCCGCTGGGGCATGATCCGGCGC
GGGACTACGGGCTGGGCAAG

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRSPTLIRVRYPEQNRQALMPVLSGKLPLLLHSAREFAMPIRHCIVHLIEKKPDGTPAVLHARDSELGESQAMENLLADL
NESYNAKQGKAWGFFHGESGAYPFSGWLAQYMEGIQDFTAFSRQAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIA
LLHHSEGVAVTESLDVAPAKHLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDAPGETR
TLLKAFSDYVESEDLPEEQAREKTSALVDYASTQAKLGEPITLEELSGVIDEDRPRAFYEHIRNKDYGLSPEIPPDKRTL
NQFRRFTGRAEGLSISFESHLLGSKIEYDEDRDMLIIRQLPTQLKDQLKRRKD

Sequences:

>Translated_373_residues
MRSPTLIRVRYPEQNRQALMPVLSGKLPLLLHSAREFAMPIRHCIVHLIEKKPDGTPAVLHARDSELGESQAMENLLADL
NESYNAKQGKAWGFFHGESGAYPFSGWLAQYMEGIQDFTAFSRQAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIA
LLHHSEGVAVTESLDVAPAKHLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDAPGETR
TLLKAFSDYVESEDLPEEQAREKTSALVDYASTQAKLGEPITLEELSGVIDEDRPRAFYEHIRNKDYGLSPEIPPDKRTL
NQFRRFTGRAEGLSISFESHLLGSKIEYDEDRDMLIIRQLPTQLKDQLKRRKD
>Mature_373_residues
MRSPTLIRVRYPEQNRQALMPVLSGKLPLLLHSAREFAMPIRHCIVHLIEKKPDGTPAVLHARDSELGESQAMENLLADL
NESYNAKQGKAWGFFHGESGAYPFSGWLAQYMEGIQDFTAFSRQAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIA
LLHHSEGVAVTESLDVAPAKHLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDAPGETR
TLLKAFSDYVESEDLPEEQAREKTSALVDYASTQAKLGEPITLEELSGVIDEDRPRAFYEHIRNKDYGLSPEIPPDKRTL
NQFRRFTGRAEGLSISFESHLLGSKIEYDEDRDMLIIRQLPTQLKDQLKRRKD

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=335, Percent_Identity=34.3283582089552, Blast_Score=201, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 42313; Mature: 42313

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPTLIRVRYPEQNRQALMPVLSGKLPLLLHSAREFAMPIRHCIVHLIEKKPDGTPAVL
CCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
HARDSELGESQAMENLLADLNESYNAKQGKAWGFFHGESGAYPFSGWLAQYMEGIQDFTA
ECCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
FSRQAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIALLHHSEGVAVTESLDVAPAK
HHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCHHHHHHHHHHHCCCCCEEECCCCCCCCC
HLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDAPGETR
CCCCCCEEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCHHH
TLLKAFSDYVESEDLPEEQAREKTSALVDYASTQAKLGEPITLEELSGVIDEDRPRAFYE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHH
HIRNKDYGLSPEIPPDKRTLNQFRRFTGRAEGLSISFESHLLGSKIEYDEDRDMLIIRQL
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCEEHHHHC
PTQLKDQLKRRKD
CHHHHHHHHHCCC
>Mature Secondary Structure
MRSPTLIRVRYPEQNRQALMPVLSGKLPLLLHSAREFAMPIRHCIVHLIEKKPDGTPAVL
CCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
HARDSELGESQAMENLLADLNESYNAKQGKAWGFFHGESGAYPFSGWLAQYMEGIQDFTA
ECCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
FSRQAVEHLQKLMEESNLSTGGHVLFAHYQQGMTDYLAIALLHHSEGVAVTESLDVAPAK
HHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCHHHHHHHHHHHCCCCCEEECCCCCCCCC
HLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDAPGETR
CCCCCCEEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCHHH
TLLKAFSDYVESEDLPEEQAREKTSALVDYASTQAKLGEPITLEELSGVIDEDRPRAFYE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHH
HIRNKDYGLSPEIPPDKRTLNQFRRFTGRAEGLSISFESHLLGSKIEYDEDRDMLIIRQL
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCEEHHHHC
PTQLKDQLKRRKD
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA