Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

Click here to switch to the map view.

The map label for this gene is 146283400

Identifier: 146283400

GI number: 146283400

Start: 3302572

End: 3303240

Strand: Direct

Name: 146283400

Synonym: PST_3071

Alternate gene names: NA

Gene position: 3302572-3303240 (Clockwise)

Preceding gene: 146283399

Following gene: 146283401

Centisome position: 72.31

GC content: 68.31

Gene sequence:

>669_bases
ATGCTCATGGCCAATCGTCAGGACGCCCTGCTGCTCGTCCTGCAGGGCCCCGACTGCGCAGGCAAGAACGGCGTGGTGCG
CCGCGTGCTCGCCGGCCTCGACCCGCTCGGGATGTCGGCCATCGGTTTCCAGGCACCGACTCCGGACGAGCGCCGCGAGG
GGTTTCTCCAGCGTTACCGCGAGCGCCTGCCGGCCCCTGGCACGCTGGGCGTGTTCAACCGCAGCTACTACGAGGCGCTG
GTCAGCGATGTGCGTGACGGCCTGTGCGCGGTGGCGGACCTGCCGCAACGCTACGGAGCGATCGCCGAATTCGAACAGCG
GATGCACGCGCAACGGATTCACCCCCTCAAGTGCTACCTGCAGCTCTCGCTCGGCGAGCAGAAGCGGCGGCTGCATCGCC
GTCTGGATCATCCGGAAAAACGCTGGAAACTGACCCTGGGCGATCTGCGCGACCATCGCCACTTCGCCGATCACCAGGCG
CAATGGGCCGAGGTGCTGGGGCGCACCCACCGCGACGCGGCGCCCTGGTACGTGATTCCTGCCGATCATCGCTGGCTGCG
CGACCTTATCGTCGCCAGCCTGCTGGCCCGTGAGTTCGAACGCCTGGCGCTGAGCTGGCCGAGCCGCCCGGCGCCGTTCA
GCCATGCAGACCTGGACGGCACACCATGA

Upstream 100 bases:

>100_bases
CCCGCTGGGGCATGATCCGGCGCGGGACTACGGGCTGGGCAAGCCGCAGGCACAGACACAGCTGGCCGGGCTGAAGGAGT
GGCTGCGCGAGCAGCAGAGC

Downstream 100 bases:

>100_bases
AACGGTTCGCCTGGTTGCTATGGCTGCTGCCGATGCTGGCCCCGGCGCAGGACGGCAGCACCGCGCCCGAGCTGTCGGTG
GAAGCGGTGCGCTTCACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLMANRQDALLLVLQGPDCAGKNGVVRRVLAGLDPLGMSAIGFQAPTPDERREGFLQRYRERLPAPGTLGVFNRSYYEAL
VSDVRDGLCAVADLPQRYGAIAEFEQRMHAQRIHPLKCYLQLSLGEQKRRLHRRLDHPEKRWKLTLGDLRDHRHFADHQA
QWAEVLGRTHRDAAPWYVIPADHRWLRDLIVASLLAREFERLALSWPSRPAPFSHADLDGTP

Sequences:

>Translated_222_residues
MLMANRQDALLLVLQGPDCAGKNGVVRRVLAGLDPLGMSAIGFQAPTPDERREGFLQRYRERLPAPGTLGVFNRSYYEAL
VSDVRDGLCAVADLPQRYGAIAEFEQRMHAQRIHPLKCYLQLSLGEQKRRLHRRLDHPEKRWKLTLGDLRDHRHFADHQA
QWAEVLGRTHRDAAPWYVIPADHRWLRDLIVASLLAREFERLALSWPSRPAPFSHADLDGTP
>Mature_222_residues
MLMANRQDALLLVLQGPDCAGKNGVVRRVLAGLDPLGMSAIGFQAPTPDERREGFLQRYRERLPAPGTLGVFNRSYYEAL
VSDVRDGLCAVADLPQRYGAIAEFEQRMHAQRIHPLKCYLQLSLGEQKRRLHRRLDHPEKRWKLTLGDLRDHRHFADHQA
QWAEVLGRTHRDAAPWYVIPADHRWLRDLIVASLLAREFERLALSWPSRPAPFSHADLDGTP

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 25420; Mature: 25420

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMANRQDALLLVLQGPDCAGKNGVVRRVLAGLDPLGMSAIGFQAPTPDERREGFLQRYR
CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHH
ERLPAPGTLGVFNRSYYEALVSDVRDGLCAVADLPQRYGAIAEFEQRMHAQRIHPLKCYL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHE
QLSLGEQKRRLHRRLDHPEKRWKLTLGDLRDHRHFADHQAQWAEVLGRTHRDAAPWYVIP
ECCCCHHHHHHHHHCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
ADHRWLRDLIVASLLAREFERLALSWPSRPAPFSHADLDGTP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLMANRQDALLLVLQGPDCAGKNGVVRRVLAGLDPLGMSAIGFQAPTPDERREGFLQRYR
CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHH
ERLPAPGTLGVFNRSYYEALVSDVRDGLCAVADLPQRYGAIAEFEQRMHAQRIHPLKCYL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHE
QLSLGEQKRRLHRRLDHPEKRWKLTLGDLRDHRHFADHQAQWAEVLGRTHRDAAPWYVIP
ECCCCHHHHHHHHHCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
ADHRWLRDLIVASLLAREFERLALSWPSRPAPFSHADLDGTP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]