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The map label for this gene is yddQ [H]

Identifier: 146282675

GI number: 146282675

Start: 2545728

End: 2546324

Strand: Direct

Name: yddQ [H]

Synonym: PST_2331

Alternate gene names: 146282675

Gene position: 2545728-2546324 (Clockwise)

Preceding gene: 146282669

Following gene: 146282676

Centisome position: 55.74

GC content: 64.15

Gene sequence:

>597_bases
ATGACCAAGCCACAGACCATGCTTCAGCTCAGTGGCCGCAGCTATAACCCGGCGACGCTGACGAATGCCACCCTGCTGGT
CATCGACGTGCAGGAGGAATACCGCAGTGGCGTTCTGGCCCTGCCCGCCCTGGATCGGGCGCTACCGGAAATCACCCGCC
TGCTGGCAGCTGCGCGCGCGGCCGGCGCACCGATCGTGCACGTGCATCACCTGGGCATCAGCGGCGGGCTGTTCGATCCG
CAAGGTTTTCGTGGACAGATCATGCCCGAAGCCGCGCCGCTGCCCGGCGAGCCCGTGGTCGCCAAACGCCTCCCCAATGC
TTTTTCCGGCACCGAGCTGCACGAGCTGCTGCAGAAGCTCGGCCGCCTCGATCTCATCGTTTGCGGCTTCATGACCCATT
CGAGCATCAGCACCACCGTTCGCGCAGCCAAGGATTACGGCTATCGCTGCACTCTCGTCGACAGCGCCTGCGCCACGCGC
AACCTGCCGATGGGCGAAGGCAGCATCGATGCCGAACAGGTCCATCGCATTGAAATGACCATCCTTGCCGACAATTTTGC
GGTCTGCGTGCCGGACACAGCAGCCCTGAGCCGCTAG

Upstream 100 bases:

>100_bases
GAGCAGTCACTCGCCTGCCAAGCGAAACAATCGGCTGGACGGTTCACATCGGCGCGCTCAGGCGCCACAATCAGCCCCCT
CACAGCACAAGGAGCCGACA

Downstream 100 bases:

>100_bases
GACGCTTTCTGCGCGCGGCAGTGGCTGGGGTAAACTGGCCTTCTGTTTGGAGGCCCCATGCAAGACGACGACGATTTTTC
CCTCTTCCAATCGGCCGTGC

Product: isochorismatase superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTKPQTMLQLSGRSYNPATLTNATLLVIDVQEEYRSGVLALPALDRALPEITRLLAAARAAGAPIVHVHHLGISGGLFDP
QGFRGQIMPEAAPLPGEPVVAKRLPNAFSGTELHELLQKLGRLDLIVCGFMTHSSISTTVRAAKDYGYRCTLVDSACATR
NLPMGEGSIDAEQVHRIEMTILADNFAVCVPDTAALSR

Sequences:

>Translated_198_residues
MTKPQTMLQLSGRSYNPATLTNATLLVIDVQEEYRSGVLALPALDRALPEITRLLAAARAAGAPIVHVHHLGISGGLFDP
QGFRGQIMPEAAPLPGEPVVAKRLPNAFSGTELHELLQKLGRLDLIVCGFMTHSSISTTVRAAKDYGYRCTLVDSACATR
NLPMGEGSIDAEQVHRIEMTILADNFAVCVPDTAALSR
>Mature_197_residues
TKPQTMLQLSGRSYNPATLTNATLLVIDVQEEYRSGVLALPALDRALPEITRLLAAARAAGAPIVHVHHLGISGGLFDPQ
GFRGQIMPEAAPLPGEPVVAKRLPNAFSGTELHELLQKLGRLDLIVCGFMTHSSISTTVRAAKDYGYRCTLVDSACATRN
LPMGEGSIDAEQVHRIEMTILADNFAVCVPDTAALSR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21214; Mature: 21083

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPQTMLQLSGRSYNPATLTNATLLVIDVQEEYRSGVLALPALDRALPEITRLLAAARA
CCCCCCEEEECCCCCCCCEECCCEEEEEECCHHHCCCEEEEHHHHHHHHHHHHHHHHHHH
AGAPIVHVHHLGISGGLFDPQGFRGQIMPEAAPLPGEPVVAKRLPNAFSGTELHELLQKL
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHH
GRLDLIVCGFMTHSSISTTVRAAKDYGYRCTLVDSACATRNLPMGEGSIDAEQVHRIEMT
CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCHHHHHEEEEE
ILADNFAVCVPDTAALSR
EEECCEEEECCCHHHCCC
>Mature Secondary Structure 
TKPQTMLQLSGRSYNPATLTNATLLVIDVQEEYRSGVLALPALDRALPEITRLLAAARA
CCCCCEEEECCCCCCCCEECCCEEEEEECCHHHCCCEEEEHHHHHHHHHHHHHHHHHHH
AGAPIVHVHHLGISGGLFDPQGFRGQIMPEAAPLPGEPVVAKRLPNAFSGTELHELLQKL
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHH
GRLDLIVCGFMTHSSISTTVRAAKDYGYRCTLVDSACATRNLPMGEGSIDAEQVHRIEMT
CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCHHHHHEEEEE
ILADNFAVCVPDTAALSR
EEECCEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]