| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is dhbF [H]
Identifier: 145301198
GI number: 145301198
Start: 4686032
End: 4688200
Strand: Direct
Name: dhbF [H]
Synonym: ASA_4376
Alternate gene names: 145301198
Gene position: 4686032-4688200 (Clockwise)
Preceding gene: 145301189
Following gene: 145301201
Centisome position: 99.65
GC content: 52.88
Gene sequence:
>2169_bases TTGCCACTATGTTACTCCGAGGTATTGCCCGAAATACCTGTGAGCACTCATGAAGAAAATATCTGGTTGTTGCAACAACA GCATCCGGAGCAAGTCATCAAGCACCTGGAAGTCTGGCGGCTGGATGACAATGTCGATATTTCATTGCTCACTCTGACTA TTCAGTCATTAATAACGGCCTTGCCGGATTTGAATTCCCGCTATCTCTTCAGTGATGAAGGAGACCTTTATAAATACAGG GTTGATGGCTGGTATCCCTGTCTGGAATTTATCCGGTTGTCTTCGGGGGACCTCGATACCACCCTTGGCTCCCTTCATAC GTCGCCCTGGGATTCTGCCAGTCAGCCGCCGTTCAAGGCATTCATTATCCATGTAGAACAGTGTGTTATGTTCGCATTGA TGTCTCATCCCATACTGGGGGAAGCGTGTTGTCTGGGCCCGCTGGTGGCCAGATTGCGTGATGAGTACGGCGCCCTTGCT CCGCATCTGCCTTCTCTGGAAATGACAAAGCTATCGATAAACTCAGGCGTGTTAGCACCTGAAATTACCAATAACCAGAC GGAACACACGGAAAGGGACAAGCTGGCGCTTATTTTACTTGATGAGTTTCGTATTGCTTTATCCAGCCCTGAAATGACGC TTAATGATGACTTCTTTGATTTTGGCGGCCACTCATTGCTGGCTACGCGCATTATTGGCAAGTTACAGAATCGTCATGGT ATTGAGTGCCGTTTCAATGATTTTTTTGAGTCGCCTTCTGCGGCTGCCCTCGCTAAAAAAGCAGTATTGAATAGCCCGCC TCAGCAAATACCTTCACTTGTTGTTGAAAATACCAGCCAGCAGGCACCACTCGCGCTGGCACAAGCGTCATTGTGGCGAG CCTATGCTGCCCATGATTTTGGCACCATCTTCAATCTGCCCTTTGCGCTGTATTTTATTGATGAAGTTGATGAAACGGTT TTTTTGCAGGCATTTACAGACCTGATAAAACGCCACCCCAGTTTGCGAACGACTTTCCATGTGCAAGACGGTCAGGTATT CCAGCGTATTATTCCCGTTGAACATCTGGGCCAATATCGGTGGTTCTGGCACAGCGCTGAAAGCGGAGGTGTCTCCCTGG CCAATGAGGCGACCTATCAATTCGATCTCTCCCGTGAGCTGCCGATCCGTATCCGTTTCATTCGGGATGTGGCGACTGGC CGTCAGCACCTCTCATTCCTGGTTCATCACATGGTGGTGGATGAGTGGTCCATCAATCTCATGATGGAGGATCTCGCCAG CGCTTATCTTGCCCGTGCGGCAGATCAGGCGCCGGTATGGGCCACGCCAGCGCTCGATTTTCACGGATTTGCACGGCAGC AGGCAGAGCAGGGCATCAATCCCCGGCACCTGGCGTACTGGACCCGGATGTTGCAAGGTGCTGCCGACGAGCGGCGAAAG CAGCGGCTATGTGCTCCGTCCGAGGGCCAGGGTTCTATCGCGGCGCAGTGGCTGGAGCTCAAGCTCGAGCAGGGGAGTCT CGACAGTTTGTATGCCTTCGCCAGAGGCCATGACTCTTCGCTCTTCAATCTGGTGTACACGGCGATTGCGGTATCCCTGC ACAAGCTGGATGACCTGAACGAGATCGTCATAGGGACCTCGGCATCCGGACGTACCGATCCGGCATTCTTTGATACAGTG GGTTACTTCACCACCATGGTGGCGCACAGGGTCGAGTTCGATGAGCAGGAGTCTTTCGGCAGTCTGTTGAGGACGGTTAC ACATACCATCAATGACTCCATGTCCTACGCAGACATCCCGCTGGAGCAGATCCAGCAAGGACTTGGCATGACGGCGGCAG AGGGTCTCCTGTTCGATGTCTATGTCCAGATTCACGCCAAGAATGCCTTGAACGGGCGCTTGCCTACCCCTGCCGGTGAG GGGATCCGCTACCGACAGATTGATCCTGACAAAACGGAGTCCATGTTCGGGTTGCAGTTCGAGATCATGGAGGATGTGCT GGAAGGGGAGCGCAGATTGCGGCTGGTGATCACCTATAGCGCCGAACGCTACAGCAGGGATTGGGTCGAAGCCCTTTGCG TTGTGCTGAACCGGCTGTTCGGTCTGATGACAAGTACCGGTACGAGTGCATGTCGACTGGCTGATCTGGCACTGCAAAAG GAGGCATAA
Upstream 100 bases:
>100_bases TCACTGACTCTGACAGCAGGGGAGCTATCTCAGTGGTTTTTGACAGAAAAACCGGCATAACCCAATGGTCATTATTCACA ATTCAGCAAGGAGGCCACTC
Downstream 100 bases:
>100_bases ACAGTGTTCTGCCCCCTGTCAGCCGACAGGGGGCAGAACACAAGGCTAGGAGGTTGGCAGCCCGTAGTGCTGGAAGGTGG AGGTTCGGGGCAGGCGATAC
Product: non-ribosomal peptide synthetase module
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 722; Mature: 721
Protein sequence:
>722_residues MPLCYSEVLPEIPVSTHEENIWLLQQQHPEQVIKHLEVWRLDDNVDISLLTLTIQSLITALPDLNSRYLFSDEGDLYKYR VDGWYPCLEFIRLSSGDLDTTLGSLHTSPWDSASQPPFKAFIIHVEQCVMFALMSHPILGEACCLGPLVARLRDEYGALA PHLPSLEMTKLSINSGVLAPEITNNQTEHTERDKLALILLDEFRIALSSPEMTLNDDFFDFGGHSLLATRIIGKLQNRHG IECRFNDFFESPSAAALAKKAVLNSPPQQIPSLVVENTSQQAPLALAQASLWRAYAAHDFGTIFNLPFALYFIDEVDETV FLQAFTDLIKRHPSLRTTFHVQDGQVFQRIIPVEHLGQYRWFWHSAESGGVSLANEATYQFDLSRELPIRIRFIRDVATG RQHLSFLVHHMVVDEWSINLMMEDLASAYLARAADQAPVWATPALDFHGFARQQAEQGINPRHLAYWTRMLQGAADERRK QRLCAPSEGQGSIAAQWLELKLEQGSLDSLYAFARGHDSSLFNLVYTAIAVSLHKLDDLNEIVIGTSASGRTDPAFFDTV GYFTTMVAHRVEFDEQESFGSLLRTVTHTINDSMSYADIPLEQIQQGLGMTAAEGLLFDVYVQIHAKNALNGRLPTPAGE GIRYRQIDPDKTESMFGLQFEIMEDVLEGERRLRLVITYSAERYSRDWVEALCVVLNRLFGLMTSTGTSACRLADLALQK EA
Sequences:
>Translated_722_residues MPLCYSEVLPEIPVSTHEENIWLLQQQHPEQVIKHLEVWRLDDNVDISLLTLTIQSLITALPDLNSRYLFSDEGDLYKYR VDGWYPCLEFIRLSSGDLDTTLGSLHTSPWDSASQPPFKAFIIHVEQCVMFALMSHPILGEACCLGPLVARLRDEYGALA PHLPSLEMTKLSINSGVLAPEITNNQTEHTERDKLALILLDEFRIALSSPEMTLNDDFFDFGGHSLLATRIIGKLQNRHG IECRFNDFFESPSAAALAKKAVLNSPPQQIPSLVVENTSQQAPLALAQASLWRAYAAHDFGTIFNLPFALYFIDEVDETV FLQAFTDLIKRHPSLRTTFHVQDGQVFQRIIPVEHLGQYRWFWHSAESGGVSLANEATYQFDLSRELPIRIRFIRDVATG RQHLSFLVHHMVVDEWSINLMMEDLASAYLARAADQAPVWATPALDFHGFARQQAEQGINPRHLAYWTRMLQGAADERRK QRLCAPSEGQGSIAAQWLELKLEQGSLDSLYAFARGHDSSLFNLVYTAIAVSLHKLDDLNEIVIGTSASGRTDPAFFDTV GYFTTMVAHRVEFDEQESFGSLLRTVTHTINDSMSYADIPLEQIQQGLGMTAAEGLLFDVYVQIHAKNALNGRLPTPAGE GIRYRQIDPDKTESMFGLQFEIMEDVLEGERRLRLVITYSAERYSRDWVEALCVVLNRLFGLMTSTGTSACRLADLALQK EA >Mature_721_residues PLCYSEVLPEIPVSTHEENIWLLQQQHPEQVIKHLEVWRLDDNVDISLLTLTIQSLITALPDLNSRYLFSDEGDLYKYRV DGWYPCLEFIRLSSGDLDTTLGSLHTSPWDSASQPPFKAFIIHVEQCVMFALMSHPILGEACCLGPLVARLRDEYGALAP HLPSLEMTKLSINSGVLAPEITNNQTEHTERDKLALILLDEFRIALSSPEMTLNDDFFDFGGHSLLATRIIGKLQNRHGI ECRFNDFFESPSAAALAKKAVLNSPPQQIPSLVVENTSQQAPLALAQASLWRAYAAHDFGTIFNLPFALYFIDEVDETVF LQAFTDLIKRHPSLRTTFHVQDGQVFQRIIPVEHLGQYRWFWHSAESGGVSLANEATYQFDLSRELPIRIRFIRDVATGR QHLSFLVHHMVVDEWSINLMMEDLASAYLARAADQAPVWATPALDFHGFARQQAEQGINPRHLAYWTRMLQGAADERRKQ RLCAPSEGQGSIAAQWLELKLEQGSLDSLYAFARGHDSSLFNLVYTAIAVSLHKLDDLNEIVIGTSASGRTDPAFFDTVG YFTTMVAHRVEFDEQESFGSLLRTVTHTINDSMSYADIPLEQIQQGLGMTAAEGLLFDVYVQIHAKNALNGRLPTPAGEG IRYRQIDPDKTESMFGLQFEIMEDVLEGERRLRLVITYSAERYSRDWVEALCVVLNRLFGLMTSTGTSACRLADLALQKE A
Specific function: Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17550940, Length=401, Percent_Identity=21.4463840399002, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17556356, Length=218, Percent_Identity=27.0642201834862, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: NA
Molecular weight: Translated: 81321; Mature: 81190
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLCYSEVLPEIPVSTHEENIWLLQQQHPEQVIKHLEVWRLDDNVDISLLTLTIQSLITA CCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHH LPDLNSRYLFSDEGDLYKYRVDGWYPCLEFIRLSSGDLDTTLGSLHTSPWDSASQPPFKA CCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHH FIIHVEQCVMFALMSHPILGEACCLGPLVARLRDEYGALAPHLPSLEMTKLSINSGVLAP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC EITNNQTEHTERDKLALILLDEFRIALSSPEMTLNDDFFDFGGHSLLATRIIGKLQNRHG CCCCCCCCCCCCCCEEEEEEECHHHEECCCCCEECCCCHHCCCHHHHHHHHHHHHHCCCC IECRFNDFFESPSAAALAKKAVLNSPPQQIPSLVVENTSQQAPLALAQASLWRAYAAHDF CEEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GTIFNLPFALYFIDEVDETVFLQAFTDLIKRHPSLRTTFHVQDGQVFQRIIPVEHLGQYR HHHHHCCCCEEEHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCHHHCCCEE WFWHSAESGGVSLANEATYQFDLSRELPIRIRFIRDVATGRQHLSFLVHHMVVDEWSINL EEEECCCCCCEEECCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH MMEDLASAYLARAADQAPVWATPALDFHGFARQQAEQGINPRHLAYWTRMLQGAADERRK HHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH QRLCAPSEGQGSIAAQWLELKLEQGSLDSLYAFARGHDSSLFNLVYTAIAVSLHKLDDLN HHCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC EIVIGTSASGRTDPAFFDTVGYFTTMVAHRVEFDEQESFGSLLRTVTHTINDSMSYADIP CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC LEQIQQGLGMTAAEGLLFDVYVQIHAKNALNGRLPTPAGEGIRYRQIDPDKTESMFGLQF HHHHHHCCCCCHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHCHHH EIMEDVLEGERRLRLVITYSAERYSRDWVEALCVVLNRLFGLMTSTGTSACRLADLALQK HHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC EA CC >Mature Secondary Structure PLCYSEVLPEIPVSTHEENIWLLQQQHPEQVIKHLEVWRLDDNVDISLLTLTIQSLITA CCCHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHH LPDLNSRYLFSDEGDLYKYRVDGWYPCLEFIRLSSGDLDTTLGSLHTSPWDSASQPPFKA CCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHH FIIHVEQCVMFALMSHPILGEACCLGPLVARLRDEYGALAPHLPSLEMTKLSINSGVLAP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC EITNNQTEHTERDKLALILLDEFRIALSSPEMTLNDDFFDFGGHSLLATRIIGKLQNRHG CCCCCCCCCCCCCCEEEEEEECHHHEECCCCCEECCCCHHCCCHHHHHHHHHHHHHCCCC IECRFNDFFESPSAAALAKKAVLNSPPQQIPSLVVENTSQQAPLALAQASLWRAYAAHDF CEEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GTIFNLPFALYFIDEVDETVFLQAFTDLIKRHPSLRTTFHVQDGQVFQRIIPVEHLGQYR HHHHHCCCCEEEHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCHHHCCCEE WFWHSAESGGVSLANEATYQFDLSRELPIRIRFIRDVATGRQHLSFLVHHMVVDEWSINL EEEECCCCCCEEECCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH MMEDLASAYLARAADQAPVWATPALDFHGFARQQAEQGINPRHLAYWTRMLQGAADERRK HHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH QRLCAPSEGQGSIAAQWLELKLEQGSLDSLYAFARGHDSSLFNLVYTAIAVSLHKLDDLN HHCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC EIVIGTSASGRTDPAFFDTVGYFTTMVAHRVEFDEQESFGSLLRTVTHTINDSMSYADIP CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC LEQIQQGLGMTAAEGLLFDVYVQIHAKNALNGRLPTPAGEGIRYRQIDPDKTESMFGLQF HHHHHHCCCCCHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHCHHH EIMEDVLEGERRLRLVITYSAERYSRDWVEALCVVLNRLFGLMTSTGTSACRLADLALQK HHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC EA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11112781; 9384377; 10568751; 8550523 [H]