| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
Click here to switch to the map view.
The map label for this gene is exeE [H]
Identifier: 145300644
GI number: 145300644
Start: 4070245
End: 4071750
Strand: Direct
Name: exeE [H]
Synonym: ASA_3776
Alternate gene names: 145300644
Gene position: 4070245-4071750 (Clockwise)
Preceding gene: 145300643
Following gene: 145300645
Centisome position: 86.56
GC content: 62.95
Gene sequence:
>1506_bases ATGGCGGCGTACCAGCTCGATGGAACGGATCTGCCAGCAGCCCTGCCCGAGCTGCCGTTTGCCTTTGCCCGCAACTTCGG TGTCATTCTGACCGAACGCCAGGGGACTCCCTTGCTGCTCTGTCGTCAGGGGGGCGCGCCGCAAACCCTGCTGGAAGTCC GGCGGGTAGCGGGCTGCGCCTTCGAGGTGGAGCAGCTCGAGAACGATGCTTTTGAAGAGTTGCTGATGGCTCACTACCAG CGCGACTCTTCCGAGGCGCGCCAGCTGATGGAAGATCTCGGCAACGAGATGGACTTCTTTGCCCTGGCCGAAGAGCTGCC CCAGAGCGAGGATCTGCTGGACGCCGATGACGACGCCCCCATCATTCGCCTCATCAACGCCATGTTGAGCGAGGCGATAA AAGAGGAGGCGTCCGACATCCATATCGAGACCTTCGAACGGGTGCTGGTCATTCGCTTTCGCATCGATGGCGTGCTGCGG GAGATACTGCGCCCCCATCGCAAGCTGGCCTCCCTGCTGGTGTCGCGCATCAAGGTCATGTCGCGAATGGACATCGCCGA GAAGCGGGTCCCGCAGGATGGCCGCATCTCATTGCGTATCGGTGGCCGGGCGGTGGACGTGCGGGTTTCGACCATGCCGT CCAGCTACGGCGAGCGGGTGGTATTGCGTCTGCTCGACAAGAACAACGTGCGCCTCGAGCTCAAGCAGCTTGGCATGACG CTGGCCAACCGCAACATCATCAGCGAACTCATTCGCAAGCCCCACGGCATCATATTGGTGACGGGCCCGACCGGTTCGGG CAAGTCCACCACCCTGTATGCAGCGCTCTCCGAAATCAACTCGCGGGACCGCAACATACTGACGGTGGAAGACCCCATCG AATATGACCTCGAAGGGGTAGGTCAGACCCAGGTCAACACCAAGGTGGACATGACCTTCGCCCGCGGCCTGCGCGCCATC TTGCGTCAGGATCCGGACGTGGTGATGGTGGGGGAAATCCGGGATCTGGAAACCGCCCAGATAGCGGTGCAGGCGTCGCT GACCGGTCACCTGGTGATGTCGACCCTGCACACCAACACTGCCATCGGCGCCATCACCCGAATGCGGGACATGGGGATAG AGCCTTTCCTGCTCTCCTCATCCTTGCTGGCGGTACTGGCCCAGCGGCTGGTGCGTACCCTCTGTCCGGATTGCCGCACT CCACGCCCCATCACTGAGCAGGAGCGGGAGGCCATGGGTATGGAGCTGGCGCCAGATCAGCAGGTGTGGCGCCCGGTTGG CTGCGAGCAGTGCAACCACACCGGCTATCGCGGCCGGACCGGTATTCACGAGCTGGTGGTGATCGACGAGGCGGTGCGCG AGGCGATCCACAGCGCCAGCGGCGAACTGGCCATAGAGCGGCTGATCCGCGGTCATACCCCCAGCATCCGCCGGGATGGC ATCGACAAGGTGCTCAAGGGGCAGACCAGCCTTGAAGAAGTGCTGCGGGTGACCCGGGAAGATTGA
Upstream 100 bases:
>100_bases TGGCCCAGTCGCCCGAGGTACAGAAGCAGATCGAGCTGATGAAGGCCCGCCAGCAGGCGACGGCCGATGGAGCACAGCCG TTCGTACAGGGTAACAAGTA
Downstream 100 bases:
>100_bases TGTTCGGTCAGGCAAGCGATTTGAATCGGGATAGCAAGACGTCACAGTGCTAGGGCAGAGGAGCAAAAGTATTGTCAGCA TTTGAATACAAAGCCCTCGA
Product: general secretion pathway protein E
Products: NA
Alternate protein names: Type II traffic warden ATPase [H]
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MAAYQLDGTDLPAALPELPFAFARNFGVILTERQGTPLLLCRQGGAPQTLLEVRRVAGCAFEVEQLENDAFEELLMAHYQ RDSSEARQLMEDLGNEMDFFALAEELPQSEDLLDADDDAPIIRLINAMLSEAIKEEASDIHIETFERVLVIRFRIDGVLR EILRPHRKLASLLVSRIKVMSRMDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSYGERVVLRLLDKNNVRLELKQLGMT LANRNIISELIRKPHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGVGQTQVNTKVDMTFARGLRAI LRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRT PRPITEQEREAMGMELAPDQQVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRGHTPSIRRDG IDKVLKGQTSLEEVLRVTRED
Sequences:
>Translated_501_residues MAAYQLDGTDLPAALPELPFAFARNFGVILTERQGTPLLLCRQGGAPQTLLEVRRVAGCAFEVEQLENDAFEELLMAHYQ RDSSEARQLMEDLGNEMDFFALAEELPQSEDLLDADDDAPIIRLINAMLSEAIKEEASDIHIETFERVLVIRFRIDGVLR EILRPHRKLASLLVSRIKVMSRMDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSYGERVVLRLLDKNNVRLELKQLGMT LANRNIISELIRKPHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGVGQTQVNTKVDMTFARGLRAI LRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRT PRPITEQEREAMGMELAPDQQVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRGHTPSIRRDG IDKVLKGQTSLEEVLRVTRED >Mature_500_residues AAYQLDGTDLPAALPELPFAFARNFGVILTERQGTPLLLCRQGGAPQTLLEVRRVAGCAFEVEQLENDAFEELLMAHYQR DSSEARQLMEDLGNEMDFFALAEELPQSEDLLDADDDAPIIRLINAMLSEAIKEEASDIHIETFERVLVIRFRIDGVLRE ILRPHRKLASLLVSRIKVMSRMDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSYGERVVLRLLDKNNVRLELKQLGMTL ANRNIISELIRKPHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGVGQTQVNTKVDMTFARGLRAIL RQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRTP RPITEQEREAMGMELAPDQQVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRGHTPSIRRDGI DKVLKGQTSLEEVLRVTRED
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP E family [H]
Homologues:
Organism=Escherichia coli, GI1789723, Length=483, Percent_Identity=57.9710144927536, Blast_Score=566, Evalue=1e-162, Organism=Escherichia coli, GI1786296, Length=385, Percent_Identity=41.8181818181818, Blast_Score=298, Evalue=7e-82, Organism=Escherichia coli, GI87082188, Length=195, Percent_Identity=43.5897435897436, Blast_Score=128, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR013369 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E [H]
EC number: NA
Molecular weight: Translated: 55885; Mature: 55754
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00662 T2SP_E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYQLDGTDLPAALPELPFAFARNFGVILTERQGTPLLLCRQGGAPQTLLEVRRVAGCA CCEEECCCCCCCCHHHCCCHHHHCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHH FEVEQLENDAFEELLMAHYQRDSSEARQLMEDLGNEMDFFALAEELPQSEDLLDADDDAP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH IIRLINAMLSEAIKEEASDIHIETFERVLVIRFRIDGVLREILRPHRKLASLLVSRIKVM HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRMDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSYGERVVLRLLDKNNVRLELKQLGMT HHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHH LANRNIISELIRKPHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGV HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC GQTQVNTKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNT CCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEHHHHHHHHHHHHHHH AIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRTPRPITEQEREAMGMELAPDQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCH QVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRGHTPSIRRDG HHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCC IDKVLKGQTSLEEVLRVTRED HHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure AAYQLDGTDLPAALPELPFAFARNFGVILTERQGTPLLLCRQGGAPQTLLEVRRVAGCA CEEECCCCCCCCHHHCCCHHHHCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHH FEVEQLENDAFEELLMAHYQRDSSEARQLMEDLGNEMDFFALAEELPQSEDLLDADDDAP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH IIRLINAMLSEAIKEEASDIHIETFERVLVIRFRIDGVLREILRPHRKLASLLVSRIKVM HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRMDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSYGERVVLRLLDKNNVRLELKQLGMT HHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHH LANRNIISELIRKPHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGV HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC GQTQVNTKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNT CCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEHHHHHHHHHHHHHHH AIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRTPRPITEQEREAMGMELAPDQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCH QVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRGHTPSIRRDG HHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCC IDKVLKGQTSLEEVLRVTRED HHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1640836 [H]