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The map label for this gene is ynjC [C]

Identifier: 145299734

GI number: 145299734

Start: 3013599

End: 3015281

Strand: Direct

Name: ynjC [C]

Synonym: ASA_2811

Alternate gene names: 145299734

Gene position: 3013599-3015281 (Clockwise)

Preceding gene: 145299733

Following gene: 145299735

Centisome position: 64.09

GC content: 66.79

Gene sequence:

>1683_bases
ATGACGGCAGGACTCGGCAACGCCATCCGCCGCACCTTCGGCTGGCGCCCCATGTTTACCCTTCTCTGCGCCCTCCTGCT
GGCCGCCCCCCTGCTGGGAGGGCTGTGGCTGCTGGTGACACAGGGGACACTCAGCCCGCATCTTCAGCGGCTGCTGGCCC
AGCCTGGGCTCTGGCACTCGGCAGCCTTGAGCTTCTGGGTTGCGGCGGCCTCCACCCTGGGCAGCCTGCTGTTGACCGCC
CTGCTGCTGGCGCACAGCGTCAAGAACGTGGAAGAGAGTCGCAGCTTTCGGCTGCTGCGCCGTCTGCTCTCCCCCCTGCT
GGCGCTGCCCCATGTCGCCTTTGCCATCGGTTTTGCCTTCCTGCTCGCCCCCTCCGGCTGGTTGTTGCGGCTCGTCTCTC
CCTCCTTGACCGGTTTTGAGCTGCCCCCGGACTGGCAGACCATCAAAGACCCTGTCGGGCTGGGTCTGATCCTGGCGCTG
ATCCTCAAAGAGACCCCTTTCCTGCTGCTGATGGCACTGGCAGCGCAAGAACCCGCCAAGCTGGCCCGCCAGCAGTGGCT
TGGCGCCAGCCTGGGTTTCAGTGCCCCGCAGATCTGGTGGCGCCTGTTGTTGCCTGCGCTCTGGCCCGCCCTGCGCCTGC
CCCTCTATGCGGTGGCAGCGTACGGAGTGGCCGTGGTGGATCTCGCACTGCTGCTGGGGCCCGATGCCCCTGCCCCGCTG
GCCGTGCGGCTCTGGCTCTGGTATCAGGATCCAGACCTTGGCTGGCGCGGCGCCACCGCCAGCGGCGCCCTCTTGCTGCT
CACCATCAACCTGCTGCTGCTCGCCGGTTTGGGGCTGCTGGAGTGGGGCCACACGACTGTCGGCAAGCACGCCTGGCTCG
ATGGCCGGCGCGCCGTGCCAAATCCGCTGACAACCAGATTGACCTGCATCACAACCTTTACCCTGATGGCCATCAATCTG
GCGGTGCTGGCAGCCTTGGTGATCTGGTCGCTGACCCGGCGCTGGTCCTTCCCCAACCTGCTGCCTGGTCAGTGGAGCAG
CCACCATTGGCATGTACTCCTGCCGGACCTGATGCCCCTGCTTGTGACGAGTGCCCTGCTGGCACTGGCGAGCGGACTGC
TGGCGCTGCTGATGGCGGTATTGAGTCTGGAGGCTCAGCAAGGCCGTCGGCCCTGGCCCCTCTGGCTCATCTGTTTGCCA
CTGCTGCTGCCCCAGGCCAGCCTGCTGTTTGGCATCCGGCTGGGGCTTGACTGGCTGGGGGGCGGGATTGGGTGGGACTG
GGTGCTCTGGAGCCAGCTGCTGTTTGTCTTCCCCTATGCCTATCTCTGCCTGCAGGGGCCCTATCGCCAGTTCGACCCGC
GCATCACTCAGGCCGCGCTCACCCTGGGGGCCCGCCCCTGGCACGTCTGGTGGCGGGTGAAAGGGCCCCTGCTGGCACGT
CCGCTGCTCTTTGCCTTTGCGGTGGGGGCAGCGGTGAGTCTGGCCCAATACCTGCCGACCCTGCTGTTTGGCGCTGGCAG
AGTGGTCACCATCACCACTGAGGCGGTGGCCATCGGCAGCGGCCTCAACCGCCGGCTGGCTGGCCTCTATGGCCTGCTGC
AACTGCTGCTGCCCCTTGTCATCTATCTGCTGGCACTCTGGCTGCCAGCCCGGCTCAACCCTGCGCTAAAGGACGCCCGA
TGA

Upstream 100 bases:

>100_bases
CCAAACAGGTACCAGCCCTGCGCTTCAAGGCGGTGGCTGAACCCCATCCCAGCTGGCAGACCAAACTCGAAGCGGCCTGG
GCCGAGCGTTACGGTCACTG

Downstream 100 bases:

>100_bases
ACACGAGAAGCTGCCGATGCTAAACACAACCCCACTTCATCTCTACCTCGATGAGAACCTGCTGCTGTCGCTGCCTGCGC
TACAGATTGCCCCCGGTGAG

Product: ABC-type transporter, permease protein

Products: NA

Alternate protein names: ABC Transporter Fused Inner Membrane Subunits; ABC-Type Transport System Permease Component; ABC Transporter Permease; ABC Transporter Fused Inner Membrane Subunit; Permease ABC Transporter Protein; Inner Membrane ABC Transporter Permease Protein YnjC; ABC-Type Transporter Permease Protein; ABC-Type Transport System Permease Protein; ABC-Type Transport System Permease Component; Hypohetical ABC Transporter Permeaseprotein; Transport System Permease Protein

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MTAGLGNAIRRTFGWRPMFTLLCALLLAAPLLGGLWLLVTQGTLSPHLQRLLAQPGLWHSAALSFWVAAASTLGSLLLTA
LLLAHSVKNVEESRSFRLLRRLLSPLLALPHVAFAIGFAFLLAPSGWLLRLVSPSLTGFELPPDWQTIKDPVGLGLILAL
ILKETPFLLLMALAAQEPAKLARQQWLGASLGFSAPQIWWRLLLPALWPALRLPLYAVAAYGVAVVDLALLLGPDAPAPL
AVRLWLWYQDPDLGWRGATASGALLLLTINLLLLAGLGLLEWGHTTVGKHAWLDGRRAVPNPLTTRLTCITTFTLMAINL
AVLAALVIWSLTRRWSFPNLLPGQWSSHHWHVLLPDLMPLLVTSALLALASGLLALLMAVLSLEAQQGRRPWPLWLICLP
LLLPQASLLFGIRLGLDWLGGGIGWDWVLWSQLLFVFPYAYLCLQGPYRQFDPRITQAALTLGARPWHVWWRVKGPLLAR
PLLFAFAVGAAVSLAQYLPTLLFGAGRVVTITTEAVAIGSGLNRRLAGLYGLLQLLLPLVIYLLALWLPARLNPALKDAR

Sequences:

>Translated_560_residues
MTAGLGNAIRRTFGWRPMFTLLCALLLAAPLLGGLWLLVTQGTLSPHLQRLLAQPGLWHSAALSFWVAAASTLGSLLLTA
LLLAHSVKNVEESRSFRLLRRLLSPLLALPHVAFAIGFAFLLAPSGWLLRLVSPSLTGFELPPDWQTIKDPVGLGLILAL
ILKETPFLLLMALAAQEPAKLARQQWLGASLGFSAPQIWWRLLLPALWPALRLPLYAVAAYGVAVVDLALLLGPDAPAPL
AVRLWLWYQDPDLGWRGATASGALLLLTINLLLLAGLGLLEWGHTTVGKHAWLDGRRAVPNPLTTRLTCITTFTLMAINL
AVLAALVIWSLTRRWSFPNLLPGQWSSHHWHVLLPDLMPLLVTSALLALASGLLALLMAVLSLEAQQGRRPWPLWLICLP
LLLPQASLLFGIRLGLDWLGGGIGWDWVLWSQLLFVFPYAYLCLQGPYRQFDPRITQAALTLGARPWHVWWRVKGPLLAR
PLLFAFAVGAAVSLAQYLPTLLFGAGRVVTITTEAVAIGSGLNRRLAGLYGLLQLLLPLVIYLLALWLPARLNPALKDAR
>Mature_559_residues
TAGLGNAIRRTFGWRPMFTLLCALLLAAPLLGGLWLLVTQGTLSPHLQRLLAQPGLWHSAALSFWVAAASTLGSLLLTAL
LLAHSVKNVEESRSFRLLRRLLSPLLALPHVAFAIGFAFLLAPSGWLLRLVSPSLTGFELPPDWQTIKDPVGLGLILALI
LKETPFLLLMALAAQEPAKLARQQWLGASLGFSAPQIWWRLLLPALWPALRLPLYAVAAYGVAVVDLALLLGPDAPAPLA
VRLWLWYQDPDLGWRGATASGALLLLTINLLLLAGLGLLEWGHTTVGKHAWLDGRRAVPNPLTTRLTCITTFTLMAINLA
VLAALVIWSLTRRWSFPNLLPGQWSSHHWHVLLPDLMPLLVTSALLALASGLLALLMAVLSLEAQQGRRPWPLWLICLPL
LLPQASLLFGIRLGLDWLGGGIGWDWVLWSQLLFVFPYAYLCLQGPYRQFDPRITQAALTLGARPWHVWWRVKGPLLARP
LLFAFAVGAAVSLAQYLPTLLFGAGRVVTITTEAVAIGSGLNRRLAGLYGLLQLLLPLVIYLLALWLPARLNPALKDAR

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ynjcd. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG4135

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693149, Length=230, Percent_Identity=34.7826086956522, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61299; Mature: 61168

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGLGNAIRRTFGWRPMFTLLCALLLAAPLLGGLWLLVTQGTLSPHLQRLLAQPGLWHS
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHH
AALSFWVAAASTLGSLLLTALLLAHSVKNVEESRSFRLLRRLLSPLLALPHVAFAIGFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAPSGWLLRLVSPSLTGFELPPDWQTIKDPVGLGLILALILKETPFLLLMALAAQEPAK
HHCCCCHHHHHHCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH
LARQQWLGASLGFSAPQIWWRLLLPALWPALRLPLYAVAAYGVAVVDLALLLGPDAPAPL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
AVRLWLWYQDPDLGWRGATASGALLLLTINLLLLAGLGLLEWGHTTVGKHAWLDGRRAVP
EEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
NPLTTRLTCITTFTLMAINLAVLAALVIWSLTRRWSFPNLLPGQWSSHHWHVLLPDLMPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHH
LVTSALLALASGLLALLMAVLSLEAQQGRRPWPLWLICLPLLLPQASLLFGIRLGLDWLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC
GGIGWDWVLWSQLLFVFPYAYLCLQGPYRQFDPRITQAALTLGARPWHVWWRVKGPLLAR
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHCCCCEEEEEEECCCHHHH
PLLFAFAVGAAVSLAQYLPTLLFGAGRVVTITTEAVAIGSGLNRRLAGLYGLLQLLLPLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IYLLALWLPARLNPALKDAR
HHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
TAGLGNAIRRTFGWRPMFTLLCALLLAAPLLGGLWLLVTQGTLSPHLQRLLAQPGLWHS
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHH
AALSFWVAAASTLGSLLLTALLLAHSVKNVEESRSFRLLRRLLSPLLALPHVAFAIGFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAPSGWLLRLVSPSLTGFELPPDWQTIKDPVGLGLILALILKETPFLLLMALAAQEPAK
HHCCCCHHHHHHCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH
LARQQWLGASLGFSAPQIWWRLLLPALWPALRLPLYAVAAYGVAVVDLALLLGPDAPAPL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
AVRLWLWYQDPDLGWRGATASGALLLLTINLLLLAGLGLLEWGHTTVGKHAWLDGRRAVP
EEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
NPLTTRLTCITTFTLMAINLAVLAALVIWSLTRRWSFPNLLPGQWSSHHWHVLLPDLMPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHH
LVTSALLALASGLLALLMAVLSLEAQQGRRPWPLWLICLPLLLPQASLLFGIRLGLDWLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC
GGIGWDWVLWSQLLFVFPYAYLCLQGPYRQFDPRITQAALTLGARPWHVWWRVKGPLLAR
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHCCCCEEEEEEECCCHHHH
PLLFAFAVGAAVSLAQYLPTLLFGAGRVVTITTEAVAIGSGLNRRLAGLYGLLQLLLPLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IYLLALWLPARLNPALKDAR
HHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA