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The map label for this gene is rpfG [H]

Identifier: 145299710

GI number: 145299710

Start: 2983926

End: 2985344

Strand: Direct

Name: rpfG [H]

Synonym: ASA_2785

Alternate gene names: 145299710

Gene position: 2983926-2985344 (Clockwise)

Preceding gene: 145299709

Following gene: 145299713

Centisome position: 63.46

GC content: 56.59

Gene sequence:

>1419_bases
GTGCATCGCATCACCAAGATCACCCTGAGCAAGTTTGAATTCGATAACAAACCCATTGAATTTTTGCATGCTTATTCAGC
AGCCAAGGCCAAGGAGTTGCTCGCCAAGACCCCGGACGTAGCTTTGTTGCTGCTCGACGTGGTCATGGAAGTCGATCACG
CCGGTCTCGATGTGGTCAAATTCGTGCGCGAAGATCTGCAAAACAAAATGGTGCGCATCGTGCTGCGAACCGGGCAACCG
GGGCAAGCGCCGGAAGATGATGTGGTCACCAACTACGACATCAACGATTACAAGGACAAGACAGAGCTCACCTCCCAGAA
GCTGCGCACCCTGCTGCGGGCCAGCCTGCGTTCGTACCGCGATATTCGCACCCTGGAGAGCAATCGCCAGGGACTGGAAA
AGGTCATTGAGGCTTCCAAGGGGATCTTCGAAAAACGGGCGCTACGCCAGTTTGTCGAGGGCGCGCAGGAACAGCTCAGC
GCTCTGCTCAATCTGGAAGAGTCCCAGATCTATGACGTGAAGCAGCTTGCCTATGAGGTGAGGGATCAGATCCTGGAGCC
TCTGCTGCCCGGCCACCCGTCCGTGCGACTTGTCGATGCTCCTGCTATTTTGCGTCAGGCCATGACCAATCGTGCCAACG
TCTATGATGGCAACCAGATGGTGCTCTACTGTCAGAACCCCCGCCATCACCTGTTGTTTCACATCGAAACCACCCGTCAG
CTCAGCCAGATGGACATGGGGTTGCTGAGTCTGTTTACCGAAAACATCATAGTGGCGCTGGAGAACATCCGGCTCAATGA
GGTGATTGCAGATAACCAGCGCGAGATCATCTATCGCATCGGCGAGCTGGTGGAAACCCGCTCCAAGGAGTCCGGCCTGC
ACGTCAAGCGGGTTGCCCTCTACACTGAGCTGCTCTGCCAGCTGCTTGGCATTAGCGAGGAGCAGAGCGAGCTCATCAAG
CGCGCCTCTCCCCTGCACGATATCGGCAAGGTCGGGGTCCCGGATGCGATCTTGCACAAGCCAGGCAAACTGACCCCGGA
AGAGTGGGAGATCATGAAAACCCATGCCCAACTGGGGCAGGACATGCTCTCCGGCAGCGACCTGGCCCTGTTCCAGATAG
GTGCCACCATAGCCGGTAACCACCACGAAAAGTGGAATGGCAGTGGTTATCCCCGTGGTCTCAAGGGAGATGACATTCCG
TTGGAGGGACGAGTCGTGGCGCTGGCCGACGTGTTTGATGCTCTCGGGTCGGATCGCTGCTACAAGAAGGCGTGGCCGCT
GGACAAGGTACTGGCGCTGATAGAAGAAGAGAAGGGACAGCACTTCGATCCCCAACTGGTGGAGTTGATGCTGGCCAATC
TGGACAAGTTCCTCGAGATCCGCGATCAGCACAAGGATATCTACGTCGGGGATCATTGA

Upstream 100 bases:

>100_bases
GATGGATGACCAAATCCTGATTATTGACGATGACGATCTGCCCCTTCAGGAACAGCAGCAAGCTGGATGGAAGGTGATGA
TTGTGGATGATGAGCCCGAA

Downstream 100 bases:

>100_bases
CCCCTTTCACACCCGTGCACCAACTGCCGCATATAAAAAAGCCGCCTCAACAGGCGGCTTTTTAGTGAAGGCCTGTTCGT
TACTGTTCGGGCAAGTTCAG

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MHRITKITLSKFEFDNKPIEFLHAYSAAKAKELLAKTPDVALLLLDVVMEVDHAGLDVVKFVREDLQNKMVRIVLRTGQP
GQAPEDDVVTNYDINDYKDKTELTSQKLRTLLRASLRSYRDIRTLESNRQGLEKVIEASKGIFEKRALRQFVEGAQEQLS
ALLNLEESQIYDVKQLAYEVRDQILEPLLPGHPSVRLVDAPAILRQAMTNRANVYDGNQMVLYCQNPRHHLLFHIETTRQ
LSQMDMGLLSLFTENIIVALENIRLNEVIADNQREIIYRIGELVETRSKESGLHVKRVALYTELLCQLLGISEEQSELIK
RASPLHDIGKVGVPDAILHKPGKLTPEEWEIMKTHAQLGQDMLSGSDLALFQIGATIAGNHHEKWNGSGYPRGLKGDDIP
LEGRVVALADVFDALGSDRCYKKAWPLDKVLALIEEEKGQHFDPQLVELMLANLDKFLEIRDQHKDIYVGDH

Sequences:

>Translated_472_residues
MHRITKITLSKFEFDNKPIEFLHAYSAAKAKELLAKTPDVALLLLDVVMEVDHAGLDVVKFVREDLQNKMVRIVLRTGQP
GQAPEDDVVTNYDINDYKDKTELTSQKLRTLLRASLRSYRDIRTLESNRQGLEKVIEASKGIFEKRALRQFVEGAQEQLS
ALLNLEESQIYDVKQLAYEVRDQILEPLLPGHPSVRLVDAPAILRQAMTNRANVYDGNQMVLYCQNPRHHLLFHIETTRQ
LSQMDMGLLSLFTENIIVALENIRLNEVIADNQREIIYRIGELVETRSKESGLHVKRVALYTELLCQLLGISEEQSELIK
RASPLHDIGKVGVPDAILHKPGKLTPEEWEIMKTHAQLGQDMLSGSDLALFQIGATIAGNHHEKWNGSGYPRGLKGDDIP
LEGRVVALADVFDALGSDRCYKKAWPLDKVLALIEEEKGQHFDPQLVELMLANLDKFLEIRDQHKDIYVGDH
>Mature_472_residues
MHRITKITLSKFEFDNKPIEFLHAYSAAKAKELLAKTPDVALLLLDVVMEVDHAGLDVVKFVREDLQNKMVRIVLRTGQP
GQAPEDDVVTNYDINDYKDKTELTSQKLRTLLRASLRSYRDIRTLESNRQGLEKVIEASKGIFEKRALRQFVEGAQEQLS
ALLNLEESQIYDVKQLAYEVRDQILEPLLPGHPSVRLVDAPAILRQAMTNRANVYDGNQMVLYCQNPRHHLLFHIETTRQ
LSQMDMGLLSLFTENIIVALENIRLNEVIADNQREIIYRIGELVETRSKESGLHVKRVALYTELLCQLLGISEEQSELIK
RASPLHDIGKVGVPDAILHKPGKLTPEEWEIMKTHAQLGQDMLSGSDLALFQIGATIAGNHHEKWNGSGYPRGLKGDDIP
LEGRVVALADVFDALGSDRCYKKAWPLDKVLALIEEEKGQHFDPQLVELMLANLDKFLEIRDQHKDIYVGDH

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 53583; Mature: 53583

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRITKITLSKFEFDNKPIEFLHAYSAAKAKELLAKTPDVALLLLDVVMEVDHAGLDVVK
CCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
FVREDLQNKMVRIVLRTGQPGQAPEDDVVTNYDINDYKDKTELTSQKLRTLLRASLRSYR
HHHHHHHHHHHHHHEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DIRTLESNRQGLEKVIEASKGIFEKRALRQFVEGAQEQLSALLNLEESQIYDVKQLAYEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RDQILEPLLPGHPSVRLVDAPAILRQAMTNRANVYDGNQMVLYCQNPRHHLLFHIETTRQ
HHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCEECCCEEEEEECCCCCEEEEEEHHHHH
LSQMDMGLLSLFTENIIVALENIRLNEVIADNQREIIYRIGELVETRSKESGLHVKRVAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
YTELLCQLLGISEEQSELIKRASPLHDIGKVGVPDAILHKPGKLTPEEWEIMKTHAQLGQ
HHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
DMLSGSDLALFQIGATIAGNHHEKWNGSGYPRGLKGDDIPLEGRVVALADVFDALGSDRC
HHHCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCH
YKKAWPLDKVLALIEEEKGQHFDPQLVELMLANLDKFLEIRDQHKDIYVGDH
HHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCC
>Mature Secondary Structure
MHRITKITLSKFEFDNKPIEFLHAYSAAKAKELLAKTPDVALLLLDVVMEVDHAGLDVVK
CCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
FVREDLQNKMVRIVLRTGQPGQAPEDDVVTNYDINDYKDKTELTSQKLRTLLRASLRSYR
HHHHHHHHHHHHHHEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DIRTLESNRQGLEKVIEASKGIFEKRALRQFVEGAQEQLSALLNLEESQIYDVKQLAYEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RDQILEPLLPGHPSVRLVDAPAILRQAMTNRANVYDGNQMVLYCQNPRHHLLFHIETTRQ
HHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCEECCCEEEEEECCCCCEEEEEEHHHHH
LSQMDMGLLSLFTENIIVALENIRLNEVIADNQREIIYRIGELVETRSKESGLHVKRVAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
YTELLCQLLGISEEQSELIKRASPLHDIGKVGVPDAILHKPGKLTPEEWEIMKTHAQLGQ
HHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
DMLSGSDLALFQIGATIAGNHHEKWNGSGYPRGLKGDDIPLEGRVVALADVFDALGSDRC
HHHCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCH
YKKAWPLDKVLALIEEEKGQHFDPQLVELMLANLDKFLEIRDQHKDIYVGDH
HHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]