Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

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The map label for this gene is ydiA [C]

Identifier: 145299481

GI number: 145299481

Start: 2720483

End: 2721295

Strand: Direct

Name: ydiA [C]

Synonym: ASA_2545

Alternate gene names: 145299481

Gene position: 2720483-2721295 (Clockwise)

Preceding gene: 145299478

Following gene: 145299483

Centisome position: 57.85

GC content: 61.13

Gene sequence:

>813_bases
GTGCATACCGTATTCTATGTTTCCGACGGCACTGCCATCACGGCCGAAGTATTCGGCCACGCCGTGTTGAGCCAGTTTCC
ACTGGTGTTCGAACAAGTCACCATCCCCTTCGTAGAGACCCTGGAGAAAGCCAGGCAGGTGCGGGCGCGTATCGACGAGC
AGTTCCGCCAGACCGGGCTGCGGCCCATACTGTTTCACACCATAGTCGACCCCCTGGTACGAGAAGAGGTGCTCAAGGCC
CAGGCGAGCGGCCACGACTTTCTCAACACCTTCGTCAGCCCGCTGGAGCAGGAGCTGGGGGTCAAGGCCGAGCCGAGACT
CCATCGCACCCACGGCATGGAGAACCGCAAGCTCTATGACGATCGCATCGAGGCGGTCAACTTCGCACTGGCCAACGACG
ACGGCATCACCACCAAGGAGTATGAGGAGGCGGACATCATCCTCATCGGGGTCTCCCGCTGTGGCAAGACGCCGACCAGC
CTCTATCTGGCGCTGCAATTTGGCATTCGCGCCGCCAACTATCCCTTTATCGAACAGGACATGGGCGCCTTGGTGCTGCC
CACCGCCCTCAAGGCCAATCGCCACAAGCTGTTCGGCCTCACCATAACGCCCCAGCGGCTGCACGAGATCCGCAATCAGC
GCCGCGCCAACAGCCGCTACTCTTCGCTGGAGCAGTGCGAGCAGGAGTTGGCAAGCGTGGAGCGGCTATTTCGCCAGGAG
GCGATCCGCTTCCTCGACACCAGCTCTCACTCGGTGGAGGAGATAAGCGCGAAAATTCTGGAGGCTACCGGCATGCGCCG
TCAGCTCTATTGA

Upstream 100 bases:

>100_bases
TTCACAACTTGGACACAGCAGATCGGTTGACAAAATAGATATGGTTTCGAGAGATACTGACTGCTCGCAACCTCGCCAGC
CCGCATCACAGGAGCGCATC

Downstream 100 bases:

>100_bases
AATGGGAAAATATCCTGGAGATCAACGCACTGCCAACTTCATCCCAGGTGGCAAGTTGACGGGACAGATAAGCAGAAATG
AAAACGGAGCCCAATGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGLRPILFHTIVDPLVREEVLKA
QASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYDDRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTS
LYLALQFGIRAANYPFIEQDMGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE
AIRFLDTSSHSVEEISAKILEATGMRRQLY

Sequences:

>Translated_270_residues
MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGLRPILFHTIVDPLVREEVLKA
QASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYDDRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTS
LYLALQFGIRAANYPFIEQDMGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE
AIRFLDTSSHSVEEISAKILEATGMRRQLY
>Mature_270_residues
MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGLRPILFHTIVDPLVREEVLKA
QASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYDDRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTS
LYLALQFGIRAANYPFIEQDMGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE
AIRFLDTSSHSVEEISAKILEATGMRRQLY

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=269, Percent_Identity=53.9033457249071, Blast_Score=315, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2545_AERS4 (A4SNV2)

Other databases:

- EMBL:   CP000644
- RefSeq:   YP_001142322.1
- STRING:   A4SNV2
- GeneID:   4995616
- GenomeReviews:   CP000644_GR
- KEGG:   asa:ASA_2545
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   MERIEAV
- PhylomeDB:   A4SNV2
- ProtClustDB:   PRK05339
- BioCyc:   ASAL382245:ASA_2545-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30785; Mature: 30785

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGL
CCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPILFHTIVDPLVREEVLKAQASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYD
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHH
DRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTSLYLALQFGIRAANYPFIEQD
HHHHHHHEEEECCCCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCHHHC
MGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE
CCCEEEHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRFLDTSSHSVEEISAKILEATGMRRQLY
HHHHHCCCCCHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MHTVFYVSDGTAITAEVFGHAVLSQFPLVFEQVTIPFVETLEKARQVRARIDEQFRQTGL
CCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPILFHTIVDPLVREEVLKAQASGHDFLNTFVSPLEQELGVKAEPRLHRTHGMENRKLYD
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHH
DRIEAVNFALANDDGITTKEYEEADIILIGVSRCGKTPTSLYLALQFGIRAANYPFIEQD
HHHHHHHEEEECCCCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCHHHC
MGALVLPTALKANRHKLFGLTITPQRLHEIRNQRRANSRYSSLEQCEQELASVERLFRQE
CCCEEEHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRFLDTSSHSVEEISAKILEATGMRRQLY
HHHHHCCCCCHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA