Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

Click here to switch to the map view.

The map label for this gene is 145299358

Identifier: 145299358

GI number: 145299358

Start: 2568135

End: 2568770

Strand: Direct

Name: 145299358

Synonym: ASA_2406

Alternate gene names: NA

Gene position: 2568135-2568770 (Clockwise)

Preceding gene: 145299357

Following gene: 145299359

Centisome position: 54.61

GC content: 55.19

Gene sequence:

>636_bases
ATGACTGTATGCTCCCCTCACCCCATTCATAATGGGCAGGGGAGTAAAGACTCCCGAAATTTCAACTATTTGTGCACTAA
CATTGCATTGACTGTCTTTGGCTATCGACCCTTGGAGATGCTTCATCTGATGCGCTCAGGATTGCCCGGTTTCGGTTTGT
TCGTCTGCTCCCTGCTGCCATCGGCCAGCATGGCAGCGGTACGTTTTGATGTCCCCGACTACCTGTTGCGGTTGCCGCAG
CAAACCTATCAACTGATCGAAAGCAACTTCAACCACCTCTACCAGCAGACCGACTTCACCCCCCAGATCACCAACAGCTA
TTTCAACCGCTCCGATCTCTACAACTTTGTGGGGGTGCCGCTGGCCATTACCCCCCAGGCCGGTTTCCAGCTGGAGGTTT
TTGGTCAGCTCTATAACCAAAGTTCACAAAGCTATGTGCACATGAGCAAGGATCTGTCGCTCTATCGCATGATCCGGGCC
GACGTGATTGGCAACCCCAATGATGAGGTCGCCATCGGCCTGGGGCTCGGTATCCCGCTCAGCGCCCGGCTCACTTTCAA
GGCGCTGCTCTCCAGCAACGAGATCCCCGGCTATGGCGCCGCCAACTACGCCATCGGCTTCGAGTGGCGTTACTGA

Upstream 100 bases:

>100_bases
TGGCGGAGCAGAATCAGGGGAACGAACGGAACTTTGCGATTCTGAAGAGTCTCTATCGCTACCTCGAAGATCTATGAGAT
GTGATCGGTTTCACAGTTAA

Downstream 100 bases:

>100_bases
CCTCACGCGGTCGGCATATTGACAGGATTTACCAACCATTCAGGCTCCCGATGGGAGCCTGAATGGTTTATAGCAGCAAA
GGATCAGAGGTAGCGGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTVCSPHPIHNGQGSKDSRNFNYLCTNIALTVFGYRPLEMLHLMRSGLPGFGLFVCSLLPSASMAAVRFDVPDYLLRLPQ
QTYQLIESNFNHLYQQTDFTPQITNSYFNRSDLYNFVGVPLAITPQAGFQLEVFGQLYNQSSQSYVHMSKDLSLYRMIRA
DVIGNPNDEVAIGLGLGIPLSARLTFKALLSSNEIPGYGAANYAIGFEWRY

Sequences:

>Translated_211_residues
MTVCSPHPIHNGQGSKDSRNFNYLCTNIALTVFGYRPLEMLHLMRSGLPGFGLFVCSLLPSASMAAVRFDVPDYLLRLPQ
QTYQLIESNFNHLYQQTDFTPQITNSYFNRSDLYNFVGVPLAITPQAGFQLEVFGQLYNQSSQSYVHMSKDLSLYRMIRA
DVIGNPNDEVAIGLGLGIPLSARLTFKALLSSNEIPGYGAANYAIGFEWRY
>Mature_210_residues
TVCSPHPIHNGQGSKDSRNFNYLCTNIALTVFGYRPLEMLHLMRSGLPGFGLFVCSLLPSASMAAVRFDVPDYLLRLPQQ
TYQLIESNFNHLYQQTDFTPQITNSYFNRSDLYNFVGVPLAITPQAGFQLEVFGQLYNQSSQSYVHMSKDLSLYRMIRAD
VIGNPNDEVAIGLGLGIPLSARLTFKALLSSNEIPGYGAANYAIGFEWRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23652; Mature: 23521

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVCSPHPIHNGQGSKDSRNFNYLCTNIALTVFGYRPLEMLHLMRSGLPGFGLFVCSLLP
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCC
SASMAAVRFDVPDYLLRLPQQTYQLIESNFNHLYQQTDFTPQITNSYFNRSDLYNFVGVP
CCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCC
LAITPQAGFQLEVFGQLYNQSSQSYVHMSKDLSLYRMIRADVIGNPNDEVAIGLGLGIPL
EEECCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
SARLTFKALLSSNEIPGYGAANYAIGFEWRY
HHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TVCSPHPIHNGQGSKDSRNFNYLCTNIALTVFGYRPLEMLHLMRSGLPGFGLFVCSLLP
CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCC
SASMAAVRFDVPDYLLRLPQQTYQLIESNFNHLYQQTDFTPQITNSYFNRSDLYNFVGVP
CCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCC
LAITPQAGFQLEVFGQLYNQSSQSYVHMSKDLSLYRMIRADVIGNPNDEVAIGLGLGIPL
EEECCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
SARLTFKALLSSNEIPGYGAANYAIGFEWRY
HHHHHHHHHHCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA