Click here to switch to the map view.

The map label for this gene is yohJ [C]

Identifier: 145299359

GI number: 145299359

Start: 2570467

End: 2570823

Strand: Direct

Name: yohJ [C]

Synonym: ASA_2408

Alternate gene names: 145299359

Gene position: 2570467-2570823 (Clockwise)

Preceding gene: 145299358

Following gene: 145299360

Centisome position: 54.66

GC content: 60.22

Gene sequence:

>357_bases
GTGATTGCGCAACGTGCCTTGCTCTACCTTCGTGACTTTATGGTCATCGTCGCCTGCCTGCTGGTGGGTAAAACCCTGGC
CGCCATACTGCCTTTTGCCTTCCCCGGCAGCATCATCGGCATGCTGCTGCTGTTCGTGCTGCTCTCCTTGCAGCTGGTGA
AGCTGCACTGGGTCGAACTCGGTGCCGGCCTGCTGCTGCGGCATATGGGCGTCCTGTTCGTGCCGGTAGCCGTTGGCCTG
GTCGCCTGGCTTGAGCCCCTGCGCCAGTCCTTCGGTCTCATCATGCTCTGCATCGTACTGGGGATAGTCTTGATCCTGGG
CACTGTCGGGCGCCTGTACCAGAGGATGAACAAATGA

Upstream 100 bases:

>100_bases
GCCATCATCGAACTAATTTCAGCTGTTATTGTTTTAATGCCGCGCCCCTGCCTCTCTGGTAAACTGCCCATTCATTCACA
GTTTCCAAGTTGAGGCTCAG

Downstream 100 bases:

>100_bases
TCTTCTGGCTTGCCATTCCCCTGACCCTGGCACTCTATTTTGCCACCCGGGCCCTCTATCGCCGTCTGCCCTGGCCCATC
ATCAATCCCGTGCTGGTGCC

Product: LrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MIAQRALLYLRDFMVIVACLLVGKTLAAILPFAFPGSIIGMLLLFVLLSLQLVKLHWVELGAGLLLRHMGVLFVPVAVGL
VAWLEPLRQSFGLIMLCIVLGIVLILGTVGRLYQRMNK

Sequences:

>Translated_118_residues
MIAQRALLYLRDFMVIVACLLVGKTLAAILPFAFPGSIIGMLLLFVLLSLQLVKLHWVELGAGLLLRHMGVLFVPVAVGL
VAWLEPLRQSFGLIMLCIVLGIVLILGTVGRLYQRMNK
>Mature_118_residues
MIAQRALLYLRDFMVIVACLLVGKTLAAILPFAFPGSIIGMLLLFVLLSLQLVKLHWVELGAGLLLRHMGVLFVPVAVGL
VAWLEPLRQSFGLIMLCIVLGIVLILGTVGRLYQRMNK

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=99, Percent_Identity=47.4747474747475, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 12997; Mature: 12997

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAQRALLYLRDFMVIVACLLVGKTLAAILPFAFPGSIIGMLLLFVLLSLQLVKLHWVEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GAGLLLRHMGVLFVPVAVGLVAWLEPLRQSFGLIMLCIVLGIVLILGTVGRLYQRMNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAQRALLYLRDFMVIVACLLVGKTLAAILPFAFPGSIIGMLLLFVLLSLQLVKLHWVEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GAGLLLRHMGVLFVPVAVGLVAWLEPLRQSFGLIMLCIVLGIVLILGTVGRLYQRMNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA