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The map label for this gene is oxaA [H]

Identifier: 145297091

GI number: 145297091

Start: 3311459

End: 3312412

Strand: Reverse

Name: oxaA [H]

Synonym: cgR_2987

Alternate gene names: 145297091

Gene position: 3312412-3311459 (Counterclockwise)

Preceding gene: 145297092

Following gene: 145297090

Centisome position: 99.95

GC content: 54.09

Gene sequence:

>954_bases
GTGCTCAATTTCATTTATTGGCCAATTTCGGCCATTCTGTGGTTCTGGCATAAAGCGTTCAGCTTTGTGCTGAGCCCAGA
TTCCGGAATTACCTGGGCCTTGTCGATCATGTTCTTGACCTTCACCGTGCGTATGGTTCTGGTCAAGCCGATGGTCAACA
CCATGCGTTCACAGCGCAAGATGCAAGACATGGCTCCAAAGATGCAGGCCATCCGCGAGAAGTACAAAAATGACCAGCAG
AAGATGATGGAGGAGACCCGCAAACTTCAAAAAGAAGTGGGCGTTAACCCCATCGCGGGCTGTTTGCCAATGTTGGTGCA
GATCCCAGTGTTCCTGGGTCTGTTCCACGTGCTGCGCTCCTTCAACCGCACCGGTTCTGGCGTTGGCCAGCTGGAAATGA
CCGTTGAGCAAAACGCGAACACCCCGAACTACATCTTCGGTGTCGACGAGGTTCAGTCCTTCCTGCGTGCAGACCTGTTC
GGTGCGCCACTGTCGTCCTACATCACCATGCCTGCTGATGCGTTCGACGCGTTCCTTGGCCTGGATGTCTCCCGCCTCAA
CATCGCGCTGGTTGCAGCTCCAATGATTTTGATCATTGTCGTGGCAACTCACATGAACGCGCGTCTGTCCGTCAACCGCC
AGGAAGCTCGCAAGGCAGCCGGCAAGCAGCAGGCCGCTTCCAGCGATCAGATGGCCATGCAGATGCAGATGATGAACAAG
ATGATGCTCTGGTTCATGCCAGCCACCATTTTGTTCACCGGTTTCATCTGGACCATCGGTCTTCTTGTCTACATGATGTC
CAACAACGTGTGGACCTTCTTCCAGCAGCGCTACATCTTCGCCAAGATGGACGCTGAGGAAGCAGCTGAGGAGGAGGAAA
AGCGCGCAGCAAAGCGCACTACCGCTCCAAAGCCTGGTGTGAAGCCAGAAAACCCCAAGAAGCGTAAGAAGTAA

Upstream 100 bases:

>100_bases
CCGGTGCCAAACCATGGATTTTGGTCCACCGAAACGGTGACATAGAAGTCCTGCCAACAAGTACATAGTCCCTATTAATC
CCAAGGAGTTTCGACTCACA

Downstream 100 bases:

>100_bases
AACTTCACTAAAAACCGCCAGCCCACGCATTAAGGGCTGGCGGTTTTTTGCTGCCTGCAGCGCGCCATTTTAAGCGCTTG
TCGACGCTAAAAAGCACCAT

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRKMQDMAPKMQAIREKYKNDQQ
KMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRSFNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLF
GAPLSSYITMPADAFDAFLGLDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRTTAPKPGVKPENPKKRKK

Sequences:

>Translated_317_residues
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRKMQDMAPKMQAIREKYKNDQQ
KMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRSFNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLF
GAPLSSYITMPADAFDAFLGLDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRTTAPKPGVKPENPKKRKK
>Mature_317_residues
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRKMQDMAPKMQAIREKYKNDQQ
KMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRSFNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLF
GAPLSSYITMPADAFDAFLGLDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRTTAPKPGVKPENPKKRKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=87, Percent_Identity=39.0804597701149, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 36193; Mature: 36193

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQDMAPKMQAIREKYKNDQQKMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLFGAPLSSYITMPADAFDAFLG
HCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHC
LDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
TAPKPGVKPENPKKRKK
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQDMAPKMQAIREKYKNDQQKMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLFGAPLSSYITMPADAFDAFLG
HCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHC
LDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
TAPKPGVKPENPKKRKK
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969512; 11234002 [H]