| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is disA
Identifier: 145296663
GI number: 145296663
Start: 2836631
End: 2837731
Strand: Direct
Name: disA
Synonym: cgR_2570
Alternate gene names: 145296663
Gene position: 2836631-2837731 (Clockwise)
Preceding gene: 145296662
Following gene: 145296667
Centisome position: 85.59
GC content: 54.68
Gene sequence:
>1101_bases ATGACACCAACAACCACTCCTGTATCAAACCCAGATGCCCTTGCCCCTGGAACTCAGGATGTGCACACCCTCAAAGGAAC GCTACAGCGCCTCGCCCCAGGCACCCCACTGCGCGATAGCCTAGACCGCATCGTCCGTGGACACACCGGCGCGTTGATCG TCATTGGTGACGATGAAAATGTCACCTCGATCTGCGACGGCGGCTTCGAATTCGACGTTCCGTTTGCTGCAACCCGACTC CGCGAGCTGTGCAAAATGGATGGCGCTGTCATTTTGTCCTCCGACATTGAACGCATCAAACGCGCAAATGTTCAGCTACT TCCATCCCCAACCTGGCCAACCCAGGAGTCCGGAACCCGCCACCGCTCCGCAGAACGCACAGCACTTCATACCGGTGTGC CAGTAATTGCGGTATCCGAATCACAAAACACCATCACCCTCTACGTCGAGGGCAAAGCCCACATGTTGGAACAACCATCC ACCCTGCTTAACCGCGCCAACCAAGCTTTAGGCACCATGGAGCGCTACCGCGATCGCCTTGATCAAGTCAACAACCGCCT TCATCTAGCTGAACTCCACAGCTACGTCACGGTCATTGATGTTGTTTCTGTCATTCAGCGCGAGGAAATGCTACGCCGAG TGGGCGAAATCATCGACGGCGATGTCCTCGAACTAGGCAAAGACGCCAAGCAAATTCAGATCCAGCTCAGCGAATTACGT GGCGATAATGACCGCGAACGTGAATCAATCATCGCCGACTACTTGGTCACAGACGGTATTCCTGCAGATGAGGAAATCTA CGCAGCCCTCGAAGCGATCTCACATTTAGATGATAAGGCTCTGCTGAAACCTGCCAACATTGCGCGTATTCTCGGACTGC CGCCAACTGAAGAAGCCCTCGACGAGCCCGTAGCTCCCCGAGGCTACCGCACGCTCAACAGAATTCCTCGAGTGCAAAAA TTCCTCATGGATAAACTCATCGTGGAATTCGGCAATCTAGATGCGCTGCTCAACGCGTCAGTAGAGGACCTAAGTGCAGT CGATGGTGTGGGCTCACTGTGGGCACGCCACATCACCGACGGACTTGGCCGTTTAAGTTAG
Upstream 100 bases:
>100_bases AGCAGTCATCCCCGGAGGCTCAGGCATCAAACAAACAAGCCTGAGAGTCATCGAAGCTTCAACGCTTGCCGAAGCACTTG CAGCAGTAAGCTTATAAACC
Downstream 100 bases:
>100_bases GTTAAAGGTCACCGCTGGTGAAGGGTTATTACCAACCACGGTGTGTAGGTAGTAGCCACCAGCGGGGACATCAGTGCGGT TATTGCACTGGTTTGGCGCT
Product: DNA integrity scanning protein DisA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTPTTTPVSNPDALAPGTQDVHTLKGTLQRLAPGTPLRDSLDRIVRGHTGALIVIGDDENVTSICDGGFEFDVPFAATRL RELCKMDGAVILSSDIERIKRANVQLLPSPTWPTQESGTRHRSAERTALHTGVPVIAVSESQNTITLYVEGKAHMLEQPS TLLNRANQALGTMERYRDRLDQVNNRLHLAELHSYVTVIDVVSVIQREEMLRRVGEIIDGDVLELGKDAKQIQIQLSELR GDNDRERESIIADYLVTDGIPADEEIYAALEAISHLDDKALLKPANIARILGLPPTEEALDEPVAPRGYRTLNRIPRVQK FLMDKLIVEFGNLDALLNASVEDLSAVDGVGSLWARHITDGLGRLS
Sequences:
>Translated_366_residues MTPTTTPVSNPDALAPGTQDVHTLKGTLQRLAPGTPLRDSLDRIVRGHTGALIVIGDDENVTSICDGGFEFDVPFAATRL RELCKMDGAVILSSDIERIKRANVQLLPSPTWPTQESGTRHRSAERTALHTGVPVIAVSESQNTITLYVEGKAHMLEQPS TLLNRANQALGTMERYRDRLDQVNNRLHLAELHSYVTVIDVVSVIQREEMLRRVGEIIDGDVLELGKDAKQIQIQLSELR GDNDRERESIIADYLVTDGIPADEEIYAALEAISHLDDKALLKPANIARILGLPPTEEALDEPVAPRGYRTLNRIPRVQK FLMDKLIVEFGNLDALLNASVEDLSAVDGVGSLWARHITDGLGRLS >Mature_365_residues TPTTTPVSNPDALAPGTQDVHTLKGTLQRLAPGTPLRDSLDRIVRGHTGALIVIGDDENVTSICDGGFEFDVPFAATRLR ELCKMDGAVILSSDIERIKRANVQLLPSPTWPTQESGTRHRSAERTALHTGVPVIAVSESQNTITLYVEGKAHMLEQPST LLNRANQALGTMERYRDRLDQVNNRLHLAELHSYVTVIDVVSVIQREEMLRRVGEIIDGDVLELGKDAKQIQIQLSELRG DNDRERESIIADYLVTDGIPADEEIYAALEAISHLDDKALLKPANIARILGLPPTEEALDEPVAPRGYRTLNRIPRVQKF LMDKLIVEFGNLDALLNASVEDLSAVDGVGSLWARHITDGLGRLS
Specific function: Participates in a DNA-damage check-point. DisA forms globular foci that rapidly scan along the chromosomes searching for lesions
COG id: COG1623
COG function: function code R; Predicted nucleic-acid-binding protein (contains the HHH domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disA family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DISA_CORGB (A4QH66)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001139484.1 - ProteinModelPortal: A4QH66 - SMR: A4QH66 - STRING: A4QH66 - GeneID: 4992501 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_2570 - eggNOG: COG1623 - HOGENOM: HBG292471 - OMA: ISVSQSM - ProtClustDB: PRK13482 - HAMAP: MF_01438 - InterPro: IPR018906 - InterPro: IPR003390 - InterPro: IPR010994
Pfam domain/function: PF10635 DisA-linker; PF02457 DisA_N; SSF47781 RuvA_2_like
EC number: NA
Molecular weight: Translated: 40259; Mature: 40128
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTTTPVSNPDALAPGTQDVHTLKGTLQRLAPGTPLRDSLDRIVRGHTGALIVIGDDEN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCC VTSICDGGFEFDVPFAATRLRELCKMDGAVILSSDIERIKRANVQLLPSPTWPTQESGTR HHHHHCCCCEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCEEEECCCCCCCCCCCCH HRSAERTALHTGVPVIAVSESQNTITLYVEGKAHMLEQPSTLLNRANQALGTMERYRDRL HHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH DQVNNRLHLAELHSYVTVIDVVSVIQREEMLRRVGEIIDGDVLELGKDAKQIQIQLSELR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHC GDNDRERESIIADYLVTDGIPADEEIYAALEAISHLDDKALLKPANIARILGLPPTEEAL CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCCHHHH DEPVAPRGYRTLNRIPRVQKFLMDKLIVEFGNLDALLNASVEDLSAVDGVGSLWARHITD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCHHHHHHHHHHH GLGRLS HHHCCC >Mature Secondary Structure TPTTTPVSNPDALAPGTQDVHTLKGTLQRLAPGTPLRDSLDRIVRGHTGALIVIGDDEN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCC VTSICDGGFEFDVPFAATRLRELCKMDGAVILSSDIERIKRANVQLLPSPTWPTQESGTR HHHHHCCCCEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCEEEECCCCCCCCCCCCH HRSAERTALHTGVPVIAVSESQNTITLYVEGKAHMLEQPSTLLNRANQALGTMERYRDRL HHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH DQVNNRLHLAELHSYVTVIDVVSVIQREEMLRRVGEIIDGDVLELGKDAKQIQIQLSELR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHC GDNDRERESIIADYLVTDGIPADEEIYAALEAISHLDDKALLKPANIARILGLPPTEEAL CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCCHHHH DEPVAPRGYRTLNRIPRVQKFLMDKLIVEFGNLDALLNASVEDLSAVDGVGSLWARHITD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCHHHHHHHHHHH GLGRLS HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA