| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296597
Identifier: 145296597
GI number: 145296597
Start: 2766633
End: 2767043
Strand: Direct
Name: 145296597
Synonym: cgR_2505
Alternate gene names: NA
Gene position: 2766633-2767043 (Clockwise)
Preceding gene: 145296587
Following gene: 145296600
Centisome position: 83.48
GC content: 54.5
Gene sequence:
>411_bases ATGGCTTCTGTATTCACGAAAATTATTAATGGCGAGCTCCCCGGCCGATTTGTTTATCGTTCTGAGAATGTCGTGGCTTT TCTATCCATCGAACCCCTCACCTACGGCCACACCCTGGTCGTACCCGTTGCAGAAGTTGACCGCTGGACCGACCTGCCTC AGGACATCTGGAGTGAAGTAAACGAGGCCTCCCAGCTCATCGGAAATGCAATCCGCACTGCATTCGACGCCCCTCGATGT GGCTACATCATCGCAGGATTCGATGTTCCCCACACCCACATCCACCTCTTCCCCACCGACAAAATGGCCGATTACGATTT CCGCAACGCCATGGCCACAGACGCCACCGACCCTGCAAAAATGGATGAAGCTGCAGAGAAGATCCGCGAAGCGCTGGACG GTCTGGTTTAG
Upstream 100 bases:
>100_bases TGGTTGAAAGTGGCGTCGAAAAGCGTCTTAAAATCACCGGCTCACCTGCATTATTTTATTCAACCTGAGTTTTACGCACG CCAAGTAGTAGTCTGTCCGT
Downstream 100 bases:
>100_bases TTCTTGTAGTTCTAATTGCTTTATTAAGAAAAGCCCACCCCTTTGCTTGGCTTTGGGGTGGGTTTTTGCGATCTGGGTGG GTCGATTGCGGAAAACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MASVFTKIINGELPGRFVYRSENVVAFLSIEPLTYGHTLVVPVAEVDRWTDLPQDIWSEVNEASQLIGNAIRTAFDAPRC GYIIAGFDVPHTHIHLFPTDKMADYDFRNAMATDATDPAKMDEAAEKIREALDGLV
Sequences:
>Translated_136_residues MASVFTKIINGELPGRFVYRSENVVAFLSIEPLTYGHTLVVPVAEVDRWTDLPQDIWSEVNEASQLIGNAIRTAFDAPRC GYIIAGFDVPHTHIHLFPTDKMADYDFRNAMATDATDPAKMDEAAEKIREALDGLV >Mature_135_residues ASVFTKIINGELPGRFVYRSENVVAFLSIEPLTYGHTLVVPVAEVDRWTDLPQDIWSEVNEASQLIGNAIRTAFDAPRCG YIIAGFDVPHTHIHLFPTDKMADYDFRNAMATDATDPAKMDEAAEKIREALDGLV
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 15125; Mature: 14994
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVFTKIINGELPGRFVYRSENVVAFLSIEPLTYGHTLVVPVAEVDRWTDLPQDIWSEV CHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCEEEEEHHHHHHHCCCHHHHHHHH NEASQLIGNAIRTAFDAPRCGYIIAGFDVPHTHIHLFPTDKMADYDFRNAMATDATDPAK HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCHH MDEAAEKIREALDGLV HHHHHHHHHHHHCCCC >Mature Secondary Structure ASVFTKIINGELPGRFVYRSENVVAFLSIEPLTYGHTLVVPVAEVDRWTDLPQDIWSEV HHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCEEEEEHHHHHHHCCCHHHHHHHH NEASQLIGNAIRTAFDAPRCGYIIAGFDVPHTHIHLFPTDKMADYDFRNAMATDATDPAK HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCHH MDEAAEKIREALDGLV HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]