| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296587
Identifier: 145296587
GI number: 145296587
Start: 2752970
End: 2755756
Strand: Direct
Name: 145296587
Synonym: cgR_2495
Alternate gene names: NA
Gene position: 2752970-2755756 (Clockwise)
Preceding gene: 145296581
Following gene: 145296597
Centisome position: 83.07
GC content: 57.16
Gene sequence:
>2787_bases ATGTCTCGCATTTCTGCGCGCACTCTGGCAATCGCACTTGCCGGTGCAACCGCGGCCAGCCTGGCAGTTGTTCCAGCAGC AACAGCTAATCCTGCCGGAACCGCTCCTGTCATCAACGAAATCTACGGAGGCGGTGGAAACAGCGGATCGTTGTTCTCCA ACGACTTCATTGAGCTCTACAACCCAACCTCAGGGGACATTTCCCTCGACGGTTGGAGCGTTACCTACTACGCAGCCAAC GGTAACTCCGGCGGAACCACAAACCTGACCGGAAACATCCCTGCCAACGGTTACTACCTCATCCAGCAACGCGCAGGCAG CAACAACACCGGCGCTCTGCCTACCCCAGACGCCACCGGTAACTTGGCAATGGGTGCCTCCCAAGGATCAGTTGCACTGA CCGACAACTCAGGTCTAACCGCTGACCTTGTCGGATTCGGTGGCACGTCCATGTTTGAAGGAACAGCTGCTGCACCTGAG GCCAGCAACAAATTGTCTGTTCAACGCAAAGAAGTTGGCGTTGACTCTGATAACAACTCCGTAGATTTCGAGACTGGAGC TCCAACTCCAACGTCCTCGGGAGGATCCGCTCCTGTTGACCCAGGCGAGCCAGAAACTCCAGTAAACCCTGGGGAAACAG TCTCCATCGCACAAATCCAAGGAACCGGTCTCGCTACCCCACTCGAGGGTCAGACCGTCACCACCGAAGGTATTGTCACT GCCGTTTACGCAGAAGGCGGCTTCAACGGTTACTACATCCAGACACCTGGATCTGGTACTGCACCAAAGGTTGCTGGCGA CGCATCCGACGGCATCTTCGTCTACGTGGGAAGCAATGGCTCCTACCCAGAGCTCGGCGCATCTGTCACCGTCACTGGCA AGGCCACCGAACACTACGAGATGACTCAGCTAGGCAACTCCTCCTTCACCGTTTCGGACACCGCATTCGAGCCAGTAACC CCACTCGAACTGGACACCGTTCCTACTGGCGATGACATTCGCGAAGCATACGAAGGCATGCTGCTGAAGCCAACCGGCGC TCACACCGTGACCAACAACTACGCAACCAACAGCTTCGGTGAAATTGCCCTCGCCCCAGGTAACGAGCCTTTGTACCAGG CCACTCAAATGGTGGCACCGGGAGCCGAAGCGATTGCGTACGAGGCGGAAAACGTCGCAAAGCAAATTACGCTGGATGAC GGACGCTCCGGCAACTACACTCGCGGCGACTCCAGCACGCCTATGGCATGGCTTGTGCAGGACGGTGGCGAGACCATCAA GTCCATCCGCACCGGCGACCAGGTGGAATTCCAGGGACCAGTAATCTTCGATTACCGCTACGACCTGTGGAAATTCCAGC CACCCACCCCTGTCACCGGCAACACCGCAAGCTCCGACCTTCCTATCACCTGGGATGACACCCGCGCGGCTGAGCTAGCT TCAATCGATGACGTTGCTGGCGAATTCCACATCGCAAGCTTCAACGTGCTCAACTACTTCACCTCTCTCGGCGAAGATGA ACCAGGCTGCAGCGCATACAGGGATATCAACAACACCCCAGTCACCGCCAACAACTGTAACGTCCGTGGCGCTTACACCG AAGAAGCACTCGAAGATCAGCAGAGCAAGATCGTCGAAGCAATCAACCGCCTTGACGTCGATGTTCTTGGACTTGAAGAA ATCGAAAACACCGCGACCGTCACCGGCGACGTCTCCCGTCGCGATGACGCACTCAATACCCTCGTCGCAGCACTCAACGA GGCAGTTGGATCCGATCGCTGGGCGGCCGTCGAATCTCCAGAACAATTAGGCACCGATGAAGACTACATCCGCGTCGCCT TCATCTACGACCAAACCACCGTCAAGCCCGTCGGCGAATCCCGAATCTTCGACGACGCAGCCTTCACCGGCACCGCACGC CAGCCACTCGCACAGGAATTCCAGCCACTCAACGACAGCGAGAAATCCTTCGTCGGCGTAGTCAACCACTTCAAGTCCAA GGGCTCTGTCACTCGTGGAGACGCCGACACCGGCGACGGCCAAGGCAACAACGCCAACGTTCGCGTCGCACAGGCACAGG CACTCATCGACCACCTGGAAAACCAGGACGACTGGGCATCCAAGCCAATCTTCATCCTCGGCGACACCAACTCCTACGCC AAGGAAACCGCGATGACCACCCTCTACGGCGCTGGCTACACCAACATCGCCACCGAATTCGACGCTGGCTACAGCTACCA GTTCTCCGGCCGCATCGGCACCCTCGACCACGCACTCGGCAACGAAGCAGCCATGAAGCACGTCGTCGACGCCGAGGTCT GGGACATCAACGCTGACGAAGCAATCGCATTCGAATACTCCCGTCGACTCAACAACACCTCCGACGTATTCGAGAACAAC GTCTTCCGCTCCTCCGACCACGACCCAATCAAGGTCGGATTCAACCTCAGCGAGACCACTGAGCCTACCACTCCGGTAGA GCCCACTGATCCTGAAGAAACAACCGATCCAACTACCCCAGTTGAGCCAACTGATCCGGTAGAGACCACGGATCCATCTG TACCTACCGATCCAGTTGAAACCACCGATCCTTCAGAGCCAACCGACCCAGCAGAACCTACTGATCCAGCTGAGCCAACC GACCCTGAGGAAACCAAGGAGCCAGAGGAGCCAAAGACCCCTGGTTCCTCAAACGGAAGCTCCCAATACGCCACCATTGC AGCAATCATCGCAGCAATCCTAGGCGCCATTGCACTCGCATTCCAGTTCTTCCCATTCAAGTTCTAA
Upstream 100 bases:
>100_bases AACTGCCAGGTCGACCAAATTACTCGCCAAGCAGACTCCGAAAAACACGGGTAATTCATATGGCTTGTATCTAATCCATA CTGAACAGAGGACCTCTCCA
Downstream 100 bases:
>100_bases TCAACTTTTAGGGAGTAATCCCCTGCCCTCGCATTACGCGAGAGCAGGGGATTCTGCGTTTCGGGGCCTCCGTGTTCCTG CGTCTTGAAAACAGCGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Extracellular Nuclease; Nuclease; Endonuclease/Exonuclease/Phosphatase Family Protein; 5-Nucleotidase Domain Protein; 5-Nucleotidase Domain-Containing Protein; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; Endonuclease/Exonuclease/Phosphatase Family; 5-Nucleotidase; PKD Domain-Containing Protein; Large Secreted Protein; Exported Nuclease; Outer Membrane Adhesin Like Proteiin; Extracellular Nuclease Surface-Anchored; LPXTG-Motif Cell Wall Anchor Domain Protein; Calcineurin-Like Phosphoesterase; Endonuclease I; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Ig Domain Domain Protein; Extracellular Nuclease/Phosphatase; 5-Nucleotidase Family Protein; Secreted Protein
Number of amino acids: Translated: 928; Mature: 927
Protein sequence:
>928_residues MSRISARTLAIALAGATAASLAVVPAATANPAGTAPVINEIYGGGGNSGSLFSNDFIELYNPTSGDISLDGWSVTYYAAN GNSGGTTNLTGNIPANGYYLIQQRAGSNNTGALPTPDATGNLAMGASQGSVALTDNSGLTADLVGFGGTSMFEGTAAAPE ASNKLSVQRKEVGVDSDNNSVDFETGAPTPTSSGGSAPVDPGEPETPVNPGETVSIAQIQGTGLATPLEGQTVTTEGIVT AVYAEGGFNGYYIQTPGSGTAPKVAGDASDGIFVYVGSNGSYPELGASVTVTGKATEHYEMTQLGNSSFTVSDTAFEPVT PLELDTVPTGDDIREAYEGMLLKPTGAHTVTNNYATNSFGEIALAPGNEPLYQATQMVAPGAEAIAYEAENVAKQITLDD GRSGNYTRGDSSTPMAWLVQDGGETIKSIRTGDQVEFQGPVIFDYRYDLWKFQPPTPVTGNTASSDLPITWDDTRAAELA SIDDVAGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALEDQQSKIVEAINRLDVDVLGLEE IENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESPEQLGTDEDYIRVAFIYDQTTVKPVGESRIFDDAAFTGTAR QPLAQEFQPLNDSEKSFVGVVNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYA KETAMTTLYGAGYTNIATEFDAGYSYQFSGRIGTLDHALGNEAAMKHVVDAEVWDINADEAIAFEYSRRLNNTSDVFENN VFRSSDHDPIKVGFNLSETTEPTTPVEPTDPEETTDPTTPVEPTDPVETTDPSVPTDPVETTDPSEPTDPAEPTDPAEPT DPEETKEPEEPKTPGSSNGSSQYATIAAIIAAILGAIALAFQFFPFKF
Sequences:
>Translated_928_residues MSRISARTLAIALAGATAASLAVVPAATANPAGTAPVINEIYGGGGNSGSLFSNDFIELYNPTSGDISLDGWSVTYYAAN GNSGGTTNLTGNIPANGYYLIQQRAGSNNTGALPTPDATGNLAMGASQGSVALTDNSGLTADLVGFGGTSMFEGTAAAPE ASNKLSVQRKEVGVDSDNNSVDFETGAPTPTSSGGSAPVDPGEPETPVNPGETVSIAQIQGTGLATPLEGQTVTTEGIVT AVYAEGGFNGYYIQTPGSGTAPKVAGDASDGIFVYVGSNGSYPELGASVTVTGKATEHYEMTQLGNSSFTVSDTAFEPVT PLELDTVPTGDDIREAYEGMLLKPTGAHTVTNNYATNSFGEIALAPGNEPLYQATQMVAPGAEAIAYEAENVAKQITLDD GRSGNYTRGDSSTPMAWLVQDGGETIKSIRTGDQVEFQGPVIFDYRYDLWKFQPPTPVTGNTASSDLPITWDDTRAAELA SIDDVAGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALEDQQSKIVEAINRLDVDVLGLEE IENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESPEQLGTDEDYIRVAFIYDQTTVKPVGESRIFDDAAFTGTAR QPLAQEFQPLNDSEKSFVGVVNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYA KETAMTTLYGAGYTNIATEFDAGYSYQFSGRIGTLDHALGNEAAMKHVVDAEVWDINADEAIAFEYSRRLNNTSDVFENN VFRSSDHDPIKVGFNLSETTEPTTPVEPTDPEETTDPTTPVEPTDPVETTDPSVPTDPVETTDPSEPTDPAEPTDPAEPT DPEETKEPEEPKTPGSSNGSSQYATIAAIIAAILGAIALAFQFFPFKF >Mature_927_residues SRISARTLAIALAGATAASLAVVPAATANPAGTAPVINEIYGGGGNSGSLFSNDFIELYNPTSGDISLDGWSVTYYAANG NSGGTTNLTGNIPANGYYLIQQRAGSNNTGALPTPDATGNLAMGASQGSVALTDNSGLTADLVGFGGTSMFEGTAAAPEA SNKLSVQRKEVGVDSDNNSVDFETGAPTPTSSGGSAPVDPGEPETPVNPGETVSIAQIQGTGLATPLEGQTVTTEGIVTA VYAEGGFNGYYIQTPGSGTAPKVAGDASDGIFVYVGSNGSYPELGASVTVTGKATEHYEMTQLGNSSFTVSDTAFEPVTP LELDTVPTGDDIREAYEGMLLKPTGAHTVTNNYATNSFGEIALAPGNEPLYQATQMVAPGAEAIAYEAENVAKQITLDDG RSGNYTRGDSSTPMAWLVQDGGETIKSIRTGDQVEFQGPVIFDYRYDLWKFQPPTPVTGNTASSDLPITWDDTRAAELAS IDDVAGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALEDQQSKIVEAINRLDVDVLGLEEI ENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESPEQLGTDEDYIRVAFIYDQTTVKPVGESRIFDDAAFTGTARQ PLAQEFQPLNDSEKSFVGVVNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYAK ETAMTTLYGAGYTNIATEFDAGYSYQFSGRIGTLDHALGNEAAMKHVVDAEVWDINADEAIAFEYSRRLNNTSDVFENNV FRSSDHDPIKVGFNLSETTEPTTPVEPTDPEETTDPTTPVEPTDPVETTDPSVPTDPVETTDPSEPTDPAEPTDPAEPTD PEETKEPEEPKTPGSSNGSSQYATIAAIIAAILGAIALAFQFFPFKF
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97690; Mature: 97558
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRISARTLAIALAGATAASLAVVPAATANPAGTAPVINEIYGGGGNSGSLFSNDFIELY CCCCCCEEEEEEEECCCHHEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEE NPTSGDISLDGWSVTYYAANGNSGGTTNLTGNIPANGYYLIQQRAGSNNTGALPTPDATG CCCCCCEEECCEEEEEEEECCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC NLAMGASQGSVALTDNSGLTADLVGFGGTSMFEGTAAAPEASNKLSVQRKEVGVDSDNNS CEEECCCCCCEEEECCCCCEEEEEECCCCHHCCCCCCCCCCCCCCEEEHHHCCCCCCCCE VDFETGAPTPTSSGGSAPVDPGEPETPVNPGETVSIAQIQGTGLATPLEGQTVTTEGIVT EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCEEE AVYAEGGFNGYYIQTPGSGTAPKVAGDASDGIFVYVGSNGSYPELGASVTVTGKATEHYE EEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEE MTQLGNSSFTVSDTAFEPVTPLELDTVPTGDDIREAYEGMLLKPTGAHTVTNNYATNSFG HHHCCCCCEEEECCCCCCCCCCEECCCCCCHHHHHHHCCEEECCCCCCEEECCCCCCCCC EIALAPGNEPLYQATQMVAPGAEAIAYEAENVAKQITLDDGRSGNYTRGDSSTPMAWLVQ CEEECCCCCHHHHHHHHHCCCHHHEEECHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEE DGGETIKSIRTGDQVEFQGPVIFDYRYDLWKFQPPTPVTGNTASSDLPITWDDTRAAELA CCCHHHHHHCCCCEEEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCEEECCCCHHHHH SIDDVAGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALEDQ HHHHHCCCEEEEEHHHHHHHHHCCCCCCCCHHHHCCCCCCEECCCCCCCCCHHHHHHHHH QSKIVEAINRLDVDVLGLEEIENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESP HHHHHHHHHHCCCEEECHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCH EQLGTDEDYIRVAFIYDQTTVKPVGESRIFDDAAFTGTARQPLAQEFQPLNDSEKSFVGV HHHCCCCCEEEEEEEECCCCCCCCCCCCEECCHHCCCCCCCHHHHHHCCCCCCHHHHHHH VNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYA HHHHHCCCCEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCHH KETAMTTLYGAGYTNIATEFDAGYSYQFSGRIGTLDHALGNEAAMKHVVDAEVWDINADE HHHHHHEEECCCCCCHHEECCCCEEEEECCCCCCHHHHHCCHHHHHHHHCCEEEECCCCC AIAFEYSRRLNNTSDVFENNVFRSSDHDPIKVGFNLSETTEPTTPVEPTDPEETTDPTTP EEEHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC VEPTDPVETTDPSVPTDPVETTDPSEPTDPAEPTDPAEPTDPEETKEPEEPKTPGSSNGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC SQYATIAAIIAAILGAIALAFQFFPFKF CHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRISARTLAIALAGATAASLAVVPAATANPAGTAPVINEIYGGGGNSGSLFSNDFIELY CCCCCEEEEEEEECCCHHEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEE NPTSGDISLDGWSVTYYAANGNSGGTTNLTGNIPANGYYLIQQRAGSNNTGALPTPDATG CCCCCCEEECCEEEEEEEECCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC NLAMGASQGSVALTDNSGLTADLVGFGGTSMFEGTAAAPEASNKLSVQRKEVGVDSDNNS CEEECCCCCCEEEECCCCCEEEEEECCCCHHCCCCCCCCCCCCCCEEEHHHCCCCCCCCE VDFETGAPTPTSSGGSAPVDPGEPETPVNPGETVSIAQIQGTGLATPLEGQTVTTEGIVT EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCEEE AVYAEGGFNGYYIQTPGSGTAPKVAGDASDGIFVYVGSNGSYPELGASVTVTGKATEHYE EEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEE MTQLGNSSFTVSDTAFEPVTPLELDTVPTGDDIREAYEGMLLKPTGAHTVTNNYATNSFG HHHCCCCCEEEECCCCCCCCCCEECCCCCCHHHHHHHCCEEECCCCCCEEECCCCCCCCC EIALAPGNEPLYQATQMVAPGAEAIAYEAENVAKQITLDDGRSGNYTRGDSSTPMAWLVQ CEEECCCCCHHHHHHHHHCCCHHHEEECHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEE DGGETIKSIRTGDQVEFQGPVIFDYRYDLWKFQPPTPVTGNTASSDLPITWDDTRAAELA CCCHHHHHHCCCCEEEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCEEECCCCHHHHH SIDDVAGEFHIASFNVLNYFTSLGEDEPGCSAYRDINNTPVTANNCNVRGAYTEEALEDQ HHHHHCCCEEEEEHHHHHHHHHCCCCCCCCHHHHCCCCCCEECCCCCCCCCHHHHHHHHH QSKIVEAINRLDVDVLGLEEIENTATVTGDVSRRDDALNTLVAALNEAVGSDRWAAVESP HHHHHHHHHHCCCEEECHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCH EQLGTDEDYIRVAFIYDQTTVKPVGESRIFDDAAFTGTARQPLAQEFQPLNDSEKSFVGV HHHCCCCCEEEEEEEECCCCCCCCCCCCEECCHHCCCCCCCHHHHHHCCCCCCHHHHHHH VNHFKSKGSVTRGDADTGDGQGNNANVRVAQAQALIDHLENQDDWASKPIFILGDTNSYA HHHHHCCCCEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCHH KETAMTTLYGAGYTNIATEFDAGYSYQFSGRIGTLDHALGNEAAMKHVVDAEVWDINADE HHHHHHEEECCCCCCHHEECCCCEEEEECCCCCCHHHHHCCHHHHHHHHCCEEEECCCCC AIAFEYSRRLNNTSDVFENNVFRSSDHDPIKVGFNLSETTEPTTPVEPTDPEETTDPTTP EEEHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC VEPTDPVETTDPSVPTDPVETTDPSEPTDPAEPTDPAEPTDPEETKEPEEPKTPGSSNGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC SQYATIAAIIAAILGAIALAFQFFPFKF CHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA