| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is benK [H]
Identifier: 145296376
GI number: 145296376
Start: 2522714
End: 2524192
Strand: Direct
Name: benK [H]
Synonym: cgR_2290
Alternate gene names: 145296376
Gene position: 2522714-2524192 (Clockwise)
Preceding gene: 145296375
Following gene: 145296377
Centisome position: 76.12
GC content: 57.94
Gene sequence:
>1479_bases ATGTTTGCGGACAAGTATCCCCTAGATCTCTTTAGGGCTATCCCTAGTTTCAGCTTTCCTTACCACAGGATTGAATGTGA ATCACATCACCAGCAGGTGACAATGTGTGATTACTTCACAAGCTCAAGGAGAATTTCTGTGGCTTCCCAAATTTCTGGCG GCTGGCAAAGTGCCAAACACCGCACCACTGTTTACATGGTCCTCGTAGTTGTGGGCATTTCTATTCTTTTTGACGGCTAC GATCTAGTGATCTACGGCGCCGTGCTGTCAACACTACTTGAAGATCCAACCCAGATCGGTGCGCTCAGCCCAGCAGTCGC CGGCACCCTTGGTTCCTACGCCATGATCGGCGTGATGATCGGTGCGCTGTCTGCAGGTGCCGTTGGTGACCGCCTTGGTC GTCGCAAAGTTATGCTCACCGCAATCGTCTGGTTCTCTGTGGGCATGGCGCTGACCGCGTTCGCGTCCTCGATTGCGCTG TTCGGTTTCTTGCGCTTCCTCACCGGACTTGGCGTGGGCATGATCGTTGCAACCGGCGGCGCAATCATCGCGGAGTTCGC TCCAGCGAATAGGCGCAACCTGTTCAATGCAATCGTGTACTCCGGTGTCCCAGCAGGCGGCGTACTGGCTTCCATCCTTG CGCTTCTCTTTGAAGATGTCATCGGCTGGCGCGGACTCTTCCTCATCGGTGGATCCCCACTACTGTTCCTCCTGCCACTT GCATACTTCTTCCTCCCAGAGTCCCCGCGCTGGCTCACCTCCCGCGGCCGTGCTGCGGACGCCAAAGCCCTCTGCGCACG CTATGGGCTGCCGACGGAGGAATTTGTCGTCGAAAAGCAGCAGGCAACAAAGGGCACCGGATTCGCTGGAATTTTCTCCT CCAAGTACCTCATGGGCACCATTCTCATCGGCGCAATGAGCTTCATCGGACTGCTGTCCACCTACGGCCTGAACACCTGG TTGCCAAAGATCATGGAATCCAACGGCGCAACCTCGCATGATTCCCTGTACTCCCTGCTGTTCCTCAACGGCGGCGCGGT ATTCGGCGGCCTCATCGCATCCTGGTTCGCTGACCGCATCGGCGCGAAGACCGTGATCACCTCCACCTTCGCTCTCGCCG CGATCTGCCTCGGAGTCCTGCCAAACATCTCCGCCTGGCCACTGATGTACACCGCAATTGCATTCGCAGGTGTCGGCGTC CTGGGCACCCAGGTTCTCACCTACGGCCTAACCTCGAACTTCTTCGGAACCGAATGCCGCGCAGCGGGAGTTGCATGGTG TGCAGGATTCGGCCGACTCGGCGGAATCGTCGGACCAGCAATCGGTGGCCTGATCATCGGCGCAGGATTCGGACCAAGCT CCGCATTCCTCATCTTCGCAGCAGCTGCCGCAATCGGCGCGGTCTGCACTTTGCTGATCCCGCGCTCCCCAGCAGAAGTA GAGGTCAAGGTCGCGCAGGAACCACTTGCACGTGTCTAA
Upstream 100 bases:
>100_bases AATACCATCTCACCCGGGTGTACAAAAAGCTCGGAATACGCAATCGGATGGAACTTGCCGAGGCTTTGAAGAAGTACTCA CACGACGCCTAGCAGCGGAT
Downstream 100 bases:
>100_bases CCCCAATTAATTCGAAACAAGGAAGCTTCGGCTTCCTTTTTCGGCATTTCACTAGCATTTAGAATTTAAGGAATTAGTTA ATGGCAAGCTCAGTATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MFADKYPLDLFRAIPSFSFPYHRIECESHHQQVTMCDYFTSSRRISVASQISGGWQSAKHRTTVYMVLVVVGISILFDGY DLVIYGAVLSTLLEDPTQIGALSPAVAGTLGSYAMIGVMIGALSAGAVGDRLGRRKVMLTAIVWFSVGMALTAFASSIAL FGFLRFLTGLGVGMIVATGGAIIAEFAPANRRNLFNAIVYSGVPAGGVLASILALLFEDVIGWRGLFLIGGSPLLFLLPL AYFFLPESPRWLTSRGRAADAKALCARYGLPTEEFVVEKQQATKGTGFAGIFSSKYLMGTILIGAMSFIGLLSTYGLNTW LPKIMESNGATSHDSLYSLLFLNGGAVFGGLIASWFADRIGAKTVITSTFALAAICLGVLPNISAWPLMYTAIAFAGVGV LGTQVLTYGLTSNFFGTECRAAGVAWCAGFGRLGGIVGPAIGGLIIGAGFGPSSAFLIFAAAAAIGAVCTLLIPRSPAEV EVKVAQEPLARV
Sequences:
>Translated_492_residues MFADKYPLDLFRAIPSFSFPYHRIECESHHQQVTMCDYFTSSRRISVASQISGGWQSAKHRTTVYMVLVVVGISILFDGY DLVIYGAVLSTLLEDPTQIGALSPAVAGTLGSYAMIGVMIGALSAGAVGDRLGRRKVMLTAIVWFSVGMALTAFASSIAL FGFLRFLTGLGVGMIVATGGAIIAEFAPANRRNLFNAIVYSGVPAGGVLASILALLFEDVIGWRGLFLIGGSPLLFLLPL AYFFLPESPRWLTSRGRAADAKALCARYGLPTEEFVVEKQQATKGTGFAGIFSSKYLMGTILIGAMSFIGLLSTYGLNTW LPKIMESNGATSHDSLYSLLFLNGGAVFGGLIASWFADRIGAKTVITSTFALAAICLGVLPNISAWPLMYTAIAFAGVGV LGTQVLTYGLTSNFFGTECRAAGVAWCAGFGRLGGIVGPAIGGLIIGAGFGPSSAFLIFAAAAAIGAVCTLLIPRSPAEV EVKVAQEPLARV >Mature_492_residues MFADKYPLDLFRAIPSFSFPYHRIECESHHQQVTMCDYFTSSRRISVASQISGGWQSAKHRTTVYMVLVVVGISILFDGY DLVIYGAVLSTLLEDPTQIGALSPAVAGTLGSYAMIGVMIGALSAGAVGDRLGRRKVMLTAIVWFSVGMALTAFASSIAL FGFLRFLTGLGVGMIVATGGAIIAEFAPANRRNLFNAIVYSGVPAGGVLASILALLFEDVIGWRGLFLIGGSPLLFLLPL AYFFLPESPRWLTSRGRAADAKALCARYGLPTEEFVVEKQQATKGTGFAGIFSSKYLMGTILIGAMSFIGLLSTYGLNTW LPKIMESNGATSHDSLYSLLFLNGGAVFGGLIASWFADRIGAKTVITSTFALAAICLGVLPNISAWPLMYTAIAFAGVGV LGTQVLTYGLTSNFFGTECRAAGVAWCAGFGRLGGIVGPAIGGLIIGAGFGPSSAFLIFAAAAAIGAVCTLLIPRSPAEV EVKVAQEPLARV
Specific function: Probable uptake of benzoate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=454, Percent_Identity=23.3480176211454, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI166064021, Length=382, Percent_Identity=25.6544502617801, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI7662270, Length=376, Percent_Identity=22.6063829787234, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI203098995, Length=218, Percent_Identity=30.2752293577982, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI213021148, Length=228, Percent_Identity=30.7017543859649, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI166197673, Length=363, Percent_Identity=26.4462809917355, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI21553331, Length=330, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI4506999, Length=376, Percent_Identity=26.3297872340426, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI87082159, Length=371, Percent_Identity=28.0323450134771, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI87081723, Length=351, Percent_Identity=27.3504273504274, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI87082231, Length=421, Percent_Identity=28.7410926365796, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1786229, Length=372, Percent_Identity=26.0752688172043, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI87082404, Length=405, Percent_Identity=25.1851851851852, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788074, Length=373, Percent_Identity=25.7372654155496, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1788068, Length=346, Percent_Identity=26.0115606936416, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1789207, Length=360, Percent_Identity=26.3888888888889, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1789312, Length=464, Percent_Identity=24.3534482758621, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32564663, Length=395, Percent_Identity=26.0759493670886, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71980582, Length=453, Percent_Identity=22.075055187638, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71980584, Length=453, Percent_Identity=22.075055187638, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32565921, Length=352, Percent_Identity=24.7159090909091, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193202825, Length=357, Percent_Identity=24.0896358543417, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71986689, Length=357, Percent_Identity=24.0896358543417, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17565978, Length=316, Percent_Identity=23.4177215189873, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17560496, Length=223, Percent_Identity=27.8026905829596, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71988651, Length=272, Percent_Identity=24.2647058823529, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17565976, Length=270, Percent_Identity=22.5925925925926, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6319718, Length=165, Percent_Identity=32.1212121212121, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320595, Length=215, Percent_Identity=26.046511627907, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24640198, Length=485, Percent_Identity=23.7113402061856, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24640196, Length=485, Percent_Identity=23.7113402061856, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24640200, Length=485, Percent_Identity=23.7113402061856, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI21355657, Length=405, Percent_Identity=27.6543209876543, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI45551160, Length=243, Percent_Identity=26.3374485596708, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24647367, Length=153, Percent_Identity=31.3725490196078, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI161078341, Length=153, Percent_Identity=31.3725490196078, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51711; Mature: 51711
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFADKYPLDLFRAIPSFSFPYHRIECESHHQQVTMCDYFTSSRRISVASQISGGWQSAKH CCCCCCCHHHHHHCCCCCCCCCEEECCCCCCEEEHHHHHCCCCCEEHHHHHCCCHHHHHH RTTVYMVLVVVGISILFDGYDLVIYGAVLSTLLEDPTQIGALSPAVAGTLGSYAMIGVMI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHH GALSAGAVGDRLGRRKVMLTAIVWFSVGMALTAFASSIALFGFLRFLTGLGVGMIVATGG HHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC AIIAEFAPANRRNLFNAIVYSGVPAGGVLASILALLFEDVIGWRGLFLIGGSPLLFLLPL HHEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH AYFFLPESPRWLTSRGRAADAKALCARYGLPTEEFVVEKQQATKGTGFAGIFSSKYLMGT HHHHCCCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ILIGAMSFIGLLSTYGLNTWLPKIMESNGATSHDSLYSLLFLNGGAVFGGLIASWFADRI HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH GAKTVITSTFALAAICLGVLPNISAWPLMYTAIAFAGVGVLGTQVLTYGLTSNFFGTECR CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AAGVAWCAGFGRLGGIVGPAIGGLIIGAGFGPSSAFLIFAAAAAIGAVCTLLIPRSPAEV HHHHHHHHHHHHHCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE EVKVAQEPLARV EEEEHHCHHCCC >Mature Secondary Structure MFADKYPLDLFRAIPSFSFPYHRIECESHHQQVTMCDYFTSSRRISVASQISGGWQSAKH CCCCCCCHHHHHHCCCCCCCCCEEECCCCCCEEEHHHHHCCCCCEEHHHHHCCCHHHHHH RTTVYMVLVVVGISILFDGYDLVIYGAVLSTLLEDPTQIGALSPAVAGTLGSYAMIGVMI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHH GALSAGAVGDRLGRRKVMLTAIVWFSVGMALTAFASSIALFGFLRFLTGLGVGMIVATGG HHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC AIIAEFAPANRRNLFNAIVYSGVPAGGVLASILALLFEDVIGWRGLFLIGGSPLLFLLPL HHEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH AYFFLPESPRWLTSRGRAADAKALCARYGLPTEEFVVEKQQATKGTGFAGIFSSKYLMGT HHHHCCCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ILIGAMSFIGLLSTYGLNTWLPKIMESNGATSHDSLYSLLFLNGGAVFGGLIASWFADRI HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH GAKTVITSTFALAAICLGVLPNISAWPLMYTAIAFAGVGVLGTQVLTYGLTSNFFGTECR CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AAGVAWCAGFGRLGGIVGPAIGGLIIGAGFGPSSAFLIFAAAAAIGAVCTLLIPRSPAEV HHHHHHHHHHHHHCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE EVKVAQEPLARV EEEEHHCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9294456 [H]