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The map label for this gene is uhpA [C]

Identifier: 145296375

GI number: 145296375

Start: 2520018

End: 2522705

Strand: Direct

Name: uhpA [C]

Synonym: cgR_2289

Alternate gene names: 145296375

Gene position: 2520018-2522705 (Clockwise)

Preceding gene: 145296374

Following gene: 145296376

Centisome position: 76.04

GC content: 56.14

Gene sequence:

>2688_bases
ATGGTTGCCTCAGTCTCTTTCACCCCGTCATCGTCCCAAACGTTCCTACCGCGGGCGTCGATCATCGTGCAAGAAGTCAG
CACACAGATCAAAAGATTAGAATCCGGCGAAGGCAAACTCTTCCACATCAGTGGCCAGCCCGGCGCGGGTAAAACAGAGT
TCGGCATGCAGCTTATCGATGAGCTCCAGGGCTGGACCGTGGTGCGTGCCACTTCCCTGTCGTGGCTGAAAAACAGCCCC
CGAAACCTCCTTGGACACATCGCCCACAAATTGGGTGCACACTCCGCCAACTCCATCCGTGGTGTGATCGACCGTCTCGA
TGCCTCCACCGTGGTGATCGTTGACGATGTCCACTGGGCCGACGTGGAATCCATGCAAAAACTCATCGAATATTCCATGC
GCATGGTTTCTGGCCGTTTCGCACTCATCATGATTGGCCTTGATGAAGAGAACTTAGTGTTCCACGATGAGGTGGTCTCG
CTCCCCTCCATCGCGGACTCCACCTACGTATTGCCGCCAATGAGTATTGAAGAAATCCGCCAGCTTGCGCTTACCGATGT
CCGCGGCCGCATCAGCACCACCACCGCCACAGACATCCAGCGCATCACCGGCGGCATCTACGGGCGAGTCAAAGAAGTCC
TCCACTCGGAATCCCCCGATCACTGGCGAATGCCCAACCCAAATATTCCCATCCCACAAAGCTGGCATGCCAACCTGTTG
AGACGCATCACCAACGAAGAAGTCTGGCATGTACTACTCGCCGTCGCGGCCCTTCCCTCCGGAGGCCCCATTGACCTGGT
AAAACTCCTAGGCAACGACCCCACGGGCATGCTTTGCGACGACGCCGTCCGCTCAGGCCTGCTCCGCGTGCTGCCGTCTG
ACGGCCAACCACAAGTGGATTTGGTCCTGCCGATCGACCGCGCCGTACTGCAATCACGCACTCCGCTCAACATTCTGGCG
CAGTTGCACCACAAGGCGGCCGAATATTACGGCAAGTGGAATCAAAAAGATGCCCAACTGGAGCACGAAGCATTTGCTGC
AATTGATCCAAATGATCCAGCAGTGCGAGCCCTAGCGCAGCGCGGATATGCGTTGGGTAGGACTGGCCACTGGATGGAAT
CGGCACACGCCCTATCTCTTGCCGCGAACCGCACTGCACACCAAGAAGAATCAAATAAGTACTTGCTGGAGTCCATCGAT
TCACTGATCGCCGCCGCCGATCTCCCCCAAGCTCGATCCAGAGCATCCACCCTTGATCTTGGAGAAACCGGCATTCAACA
AGACTCAATGCTGGGCTACCTGGCAATCCACGAAGGCCGACGCCTCGAAGCACGCAATCTCCTTCATCGTGCTTCTGAAG
AATTGCTGGCGCAGCACCCGATTGATCCGATCCACGGCCCCCGCATGGCTCAGCGCAAAGTACTGTTAAACTTATTGGAC
TGGAATCCAGAAGAACTCCTGGTGTGGGCTGATAGAGCAGTCGCATGGACTGATGAGGATGCTGGCGAAAAGGTTGAGGC
CCAAGCTATTTCCCTCATTGGACAATCCATCCTCGATGGCTGCCTCCCCGAAGATAAACCCATCCCCGGTGAAACCACCC
TTCACGCACAACGCCGCCACATGGCAATGGGCTGGCTTTCCATGGTTCATGATGATCCAGTAACTGCACGTCAAAAGCTT
GAACGTCGCACATCCATCAATGGTTCAGAACGCATCAGTTTGTGGCAAGACGGATGGCTGGCTCGGTCCCTACTCTTGAT
TGGCGAATGGGAGTCCGCAGCACGCACCGTAGAAATCGGTCTGGCCCGCGCCGAACAGTTTGGCATCCGCTTCCTCGAAC
CACTGTTACTGTGGTCGGGCGCCACAATTGCAACAGCCCGCGGAAACTCTGACTTGGCACGAAATTACATGAGCAGACTA
TCCACCGATCAAGACTCCTTCATCGTCCAATCTATGCCATCTGCGATGTGTCGCATGTGGGTCCACCGCCATAGAAATGA
AATCCCCGGTGCGATCGTGGCCGGAGAACAATTGGAAAAAATCGCCGCACACAAACACGTCAACGCACCCGGATTCTGGC
CATGGCAAGACATCCACGCAACGCATCTCATCCGCATCGGCGAAACTGAGCGCGCCCAGGAGTTAGTGAACTCCACGCTT
GAGGAGCTCAGAGGCTCCGATATCATGTCTGCCCACGCAAAAATTGCCGTTCCCGACGCCATGTTGATGATCCACCACGG
AGATGTGAAAAAGGGATTTAAGCGTTTCGACGACGCCCTCGATATGCTCGATCCCCTCACCCTCCCCTACTATCGGGCAC
GCATCTGCTTTGAATACGGCCAGGCCCTGAGACGCCAGGGGCAACGTCGACGTGCTGATGAACAATTTGCCCGTGCAGCT
TCCCTATTCCAAGACATGGGCGCCGACGCGATGGTCACCCTAGCCAACCGAGAACGCCGGGTGGGTGGCCTTGGTCAACG
ATCCGAGCAAGCCGGTGGGCTCACCCCTCAGGAATATGAAATTGCCCGATTAGTGTCATCTGGGCATGCCAACCGAGAGG
TCGCACAGGAGCTTTTCCTCTCGCCTAAGACCGTGGAATACCATCTCACCCGGGTGTACAAAAAGCTCGGAATACGCAAT
CGGATGGAACTTGCCGAGGCTTTGAAGAAGTACTCACACGACGCCTAG

Upstream 100 bases:

>100_bases
GCCAGTCGGTGGGGGCGACCAGGGATAACCCTTGGTCAATCTTAGGGACTTGTACCTGTTTTTGCAGGTACAAGTCCCTT
TTTTCGTCTAGTATTGATTT

Downstream 100 bases:

>100_bases
CAGCGGATATGTTTGCGGACAAGTATCCCCTAGATCTCTTTAGGGCTATCCCTAGTTTCAGCTTTCCTTACCACAGGATT
GAATGTGAATCACATCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 895; Mature: 895

Protein sequence:

>895_residues
MVASVSFTPSSSQTFLPRASIIVQEVSTQIKRLESGEGKLFHISGQPGAGKTEFGMQLIDELQGWTVVRATSLSWLKNSP
RNLLGHIAHKLGAHSANSIRGVIDRLDASTVVIVDDVHWADVESMQKLIEYSMRMVSGRFALIMIGLDEENLVFHDEVVS
LPSIADSTYVLPPMSIEEIRQLALTDVRGRISTTTATDIQRITGGIYGRVKEVLHSESPDHWRMPNPNIPIPQSWHANLL
RRITNEEVWHVLLAVAALPSGGPIDLVKLLGNDPTGMLCDDAVRSGLLRVLPSDGQPQVDLVLPIDRAVLQSRTPLNILA
QLHHKAAEYYGKWNQKDAQLEHEAFAAIDPNDPAVRALAQRGYALGRTGHWMESAHALSLAANRTAHQEESNKYLLESID
SLIAAADLPQARSRASTLDLGETGIQQDSMLGYLAIHEGRRLEARNLLHRASEELLAQHPIDPIHGPRMAQRKVLLNLLD
WNPEELLVWADRAVAWTDEDAGEKVEAQAISLIGQSILDGCLPEDKPIPGETTLHAQRRHMAMGWLSMVHDDPVTARQKL
ERRTSINGSERISLWQDGWLARSLLLIGEWESAARTVEIGLARAEQFGIRFLEPLLLWSGATIATARGNSDLARNYMSRL
STDQDSFIVQSMPSAMCRMWVHRHRNEIPGAIVAGEQLEKIAAHKHVNAPGFWPWQDIHATHLIRIGETERAQELVNSTL
EELRGSDIMSAHAKIAVPDAMLMIHHGDVKKGFKRFDDALDMLDPLTLPYYRARICFEYGQALRRQGQRRRADEQFARAA
SLFQDMGADAMVTLANRERRVGGLGQRSEQAGGLTPQEYEIARLVSSGHANREVAQELFLSPKTVEYHLTRVYKKLGIRN
RMELAEALKKYSHDA

Sequences:

>Translated_895_residues
MVASVSFTPSSSQTFLPRASIIVQEVSTQIKRLESGEGKLFHISGQPGAGKTEFGMQLIDELQGWTVVRATSLSWLKNSP
RNLLGHIAHKLGAHSANSIRGVIDRLDASTVVIVDDVHWADVESMQKLIEYSMRMVSGRFALIMIGLDEENLVFHDEVVS
LPSIADSTYVLPPMSIEEIRQLALTDVRGRISTTTATDIQRITGGIYGRVKEVLHSESPDHWRMPNPNIPIPQSWHANLL
RRITNEEVWHVLLAVAALPSGGPIDLVKLLGNDPTGMLCDDAVRSGLLRVLPSDGQPQVDLVLPIDRAVLQSRTPLNILA
QLHHKAAEYYGKWNQKDAQLEHEAFAAIDPNDPAVRALAQRGYALGRTGHWMESAHALSLAANRTAHQEESNKYLLESID
SLIAAADLPQARSRASTLDLGETGIQQDSMLGYLAIHEGRRLEARNLLHRASEELLAQHPIDPIHGPRMAQRKVLLNLLD
WNPEELLVWADRAVAWTDEDAGEKVEAQAISLIGQSILDGCLPEDKPIPGETTLHAQRRHMAMGWLSMVHDDPVTARQKL
ERRTSINGSERISLWQDGWLARSLLLIGEWESAARTVEIGLARAEQFGIRFLEPLLLWSGATIATARGNSDLARNYMSRL
STDQDSFIVQSMPSAMCRMWVHRHRNEIPGAIVAGEQLEKIAAHKHVNAPGFWPWQDIHATHLIRIGETERAQELVNSTL
EELRGSDIMSAHAKIAVPDAMLMIHHGDVKKGFKRFDDALDMLDPLTLPYYRARICFEYGQALRRQGQRRRADEQFARAA
SLFQDMGADAMVTLANRERRVGGLGQRSEQAGGLTPQEYEIARLVSSGHANREVAQELFLSPKTVEYHLTRVYKKLGIRN
RMELAEALKKYSHDA
>Mature_895_residues
MVASVSFTPSSSQTFLPRASIIVQEVSTQIKRLESGEGKLFHISGQPGAGKTEFGMQLIDELQGWTVVRATSLSWLKNSP
RNLLGHIAHKLGAHSANSIRGVIDRLDASTVVIVDDVHWADVESMQKLIEYSMRMVSGRFALIMIGLDEENLVFHDEVVS
LPSIADSTYVLPPMSIEEIRQLALTDVRGRISTTTATDIQRITGGIYGRVKEVLHSESPDHWRMPNPNIPIPQSWHANLL
RRITNEEVWHVLLAVAALPSGGPIDLVKLLGNDPTGMLCDDAVRSGLLRVLPSDGQPQVDLVLPIDRAVLQSRTPLNILA
QLHHKAAEYYGKWNQKDAQLEHEAFAAIDPNDPAVRALAQRGYALGRTGHWMESAHALSLAANRTAHQEESNKYLLESID
SLIAAADLPQARSRASTLDLGETGIQQDSMLGYLAIHEGRRLEARNLLHRASEELLAQHPIDPIHGPRMAQRKVLLNLLD
WNPEELLVWADRAVAWTDEDAGEKVEAQAISLIGQSILDGCLPEDKPIPGETTLHAQRRHMAMGWLSMVHDDPVTARQKL
ERRTSINGSERISLWQDGWLARSLLLIGEWESAARTVEIGLARAEQFGIRFLEPLLLWSGATIATARGNSDLARNYMSRL
STDQDSFIVQSMPSAMCRMWVHRHRNEIPGAIVAGEQLEKIAAHKHVNAPGFWPWQDIHATHLIRIGETERAQELVNSTL
EELRGSDIMSAHAKIAVPDAMLMIHHGDVKKGFKRFDDALDMLDPLTLPYYRARICFEYGQALRRQGQRRRADEQFARAA
SLFQDMGADAMVTLANRERRVGGLGQRSEQAGGLTPQEYEIARLVSSGHANREVAQELFLSPKTVEYHLTRVYKKLGIRN
RMELAEALKKYSHDA

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 99807; Mature: 99807

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASVSFTPSSSQTFLPRASIIVQEVSTQIKRLESGEGKLFHISGQPGAGKTEFGMQLID
CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
ELQGWTVVRATSLSWLKNSPRNLLGHIAHKLGAHSANSIRGVIDRLDASTVVIVDDVHWA
HHCCCEEEEECHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCC
DVESMQKLIEYSMRMVSGRFALIMIGLDEENLVFHDEVVSLPSIADSTYVLPPMSIEEIR
CHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHCCCCCCCCCEECCCCCHHHHH
QLALTDVRGRISTTTATDIQRITGGIYGRVKEVLHSESPDHWRMPNPNIPIPQSWHANLL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
RRITNEEVWHVLLAVAALPSGGPIDLVKLLGNDPTGMLCDDAVRSGLLRVLPSDGQPQVD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEHHHHHCCHHEECCCCCCCCEE
LVLPIDRAVLQSRTPLNILAQLHHKAAEYYGKWNQKDAQLEHEAFAAIDPNDPAVRALAQ
EEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEECCCCHHHHHHHH
RGYALGRTGHWMESAHALSLAANRTAHQEESNKYLLESIDSLIAAADLPQARSRASTLDL
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCC
GETGIQQDSMLGYLAIHEGRRLEARNLLHRASEELLAQHPIDPIHGPRMAQRKVLLNLLD
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
WNPEELLVWADRAVAWTDEDAGEKVEAQAISLIGQSILDGCLPEDKPIPGETTLHAQRRH
CCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
MAMGWLSMVHDDPVTARQKLERRTSINGSERISLWQDGWLARSLLLIGEWESAARTVEIG
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEHHCCHHHHHHHEEECCHHHHHHHHHH
LARAEQFGIRFLEPLLLWSGATIATARGNSDLARNYMSRLSTDQDSFIVQSMPSAMCRMW
HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VHRHRNEIPGAIVAGEQLEKIAAHKHVNAPGFWPWQDIHATHLIRIGETERAQELVNSTL
HHHHHCCCCCCEECHHHHHHHHHHCCCCCCCCCCCHHCCHHHEEEECCHHHHHHHHHHHH
EELRGSDIMSAHAKIAVPDAMLMIHHGDVKKGFKRFDDALDMLDPLTLPYYRARICFEYG
HHHCCCCHHHCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QALRRQGQRRRADEQFARAASLFQDMGADAMVTLANRERRVGGLGQRSEQAGGLTPQEYE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCHHCCCCCCCHHH
IARLVSSGHANREVAQELFLSPKTVEYHLTRVYKKLGIRNRMELAEALKKYSHDA
HHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVASVSFTPSSSQTFLPRASIIVQEVSTQIKRLESGEGKLFHISGQPGAGKTEFGMQLID
CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
ELQGWTVVRATSLSWLKNSPRNLLGHIAHKLGAHSANSIRGVIDRLDASTVVIVDDVHWA
HHCCCEEEEECHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCC
DVESMQKLIEYSMRMVSGRFALIMIGLDEENLVFHDEVVSLPSIADSTYVLPPMSIEEIR
CHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHCCCCCCCCCEECCCCCHHHHH
QLALTDVRGRISTTTATDIQRITGGIYGRVKEVLHSESPDHWRMPNPNIPIPQSWHANLL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
RRITNEEVWHVLLAVAALPSGGPIDLVKLLGNDPTGMLCDDAVRSGLLRVLPSDGQPQVD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEHHHHHCCHHEECCCCCCCCEE
LVLPIDRAVLQSRTPLNILAQLHHKAAEYYGKWNQKDAQLEHEAFAAIDPNDPAVRALAQ
EEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEECCCCHHHHHHHH
RGYALGRTGHWMESAHALSLAANRTAHQEESNKYLLESIDSLIAAADLPQARSRASTLDL
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCC
GETGIQQDSMLGYLAIHEGRRLEARNLLHRASEELLAQHPIDPIHGPRMAQRKVLLNLLD
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
WNPEELLVWADRAVAWTDEDAGEKVEAQAISLIGQSILDGCLPEDKPIPGETTLHAQRRH
CCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
MAMGWLSMVHDDPVTARQKLERRTSINGSERISLWQDGWLARSLLLIGEWESAARTVEIG
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEHHCCHHHHHHHEEECCHHHHHHHHHH
LARAEQFGIRFLEPLLLWSGATIATARGNSDLARNYMSRLSTDQDSFIVQSMPSAMCRMW
HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VHRHRNEIPGAIVAGEQLEKIAAHKHVNAPGFWPWQDIHATHLIRIGETERAQELVNSTL
HHHHHCCCCCCEECHHHHHHHHHHCCCCCCCCCCCHHCCHHHEEEECCHHHHHHHHHHHH
EELRGSDIMSAHAKIAVPDAMLMIHHGDVKKGFKRFDDALDMLDPLTLPYYRARICFEYG
HHHCCCCHHHCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QALRRQGQRRRADEQFARAASLFQDMGADAMVTLANRERRVGGLGQRSEQAGGLTPQEYE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCHHCCCCCCCHHH
IARLVSSGHANREVAQELFLSPKTVEYHLTRVYKKLGIRNRMELAEALKKYSHDA
HHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]