| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is sseA [H]
Identifier: 145295558
GI number: 145295558
Start: 1646090
End: 1646959
Strand: Direct
Name: sseA [H]
Synonym: cgR_1485
Alternate gene names: 145295558
Gene position: 1646090-1646959 (Clockwise)
Preceding gene: 145295556
Following gene: 145295559
Centisome position: 49.67
GC content: 52.18
Gene sequence:
>870_bases ATGACTTCTCTTAAAGTAACTTCGTCCACAGATGCAACCAATAACAATGATGCCCATTTTCCTGAAGGTCCAGTGGTAAC TGTTGACTGGTTGTCACACAACCTTGACCGGGATGATGTCATCGTGTTGTGTGCCACAATGGAGGATGATGAAATTGCGC GTCAAGCGGGAATTCCGGGGGCATTTCTCGCTGACTTGGAAGGAGATTTCTCAGATCCACATTCCGAGCTTCCACACACC GCGCCACCGAATTTGGTGGGTTTGCTAGAAAGCTACGGCATTAGCACCGATTCCACGGTGGTTGTTTATGATCTGCACGG CCTCATGGTTGCACCGCGGGTGTGGTGGCTTCTTCGTATTGCTGGATTAAGCAGTATTGGTGTGCTTGATGGCGGATTGC CAGCCTGGGTTGATGCTGGTCTTCCGACGGAACCGTTGTCGCTACCTACAGGTGGTGGAAGGATCAGCGCAGAACCTCAG CCGGATTTGCTCGTTGGTGCTTCTGGAGTGGAACGTGCGATTGCACGTTCAAGCAAGGCAGTGATTGATGCTCGCAATGC GAGCCGATTCGCTGGCGTTGAAGAAGAGCCCCGTCCAGGCCTGCGAAAAGGGTCGATCCCTGGAAGCGTCAACATTCCCT TCACTGATATTTCTGATGAGCATGGTTTTGTTCGGCCAGCAGAAGAGCTGAAGGAATTGATCTTCAGCCGCACAAATGGA GCGCAGTCGTTGGTCTTTAGCTGTGGCTCTGGAGTCACAGCATGTGTTGATGCCTACGCTGCAGTTATCGCAGGTTATGA CGACGTTGTAGTGTATGAGGGCTCCTGGGCGGAATGGGGCAACCCGGCAAACCAAAAGCCAATTGCTTAA
Upstream 100 bases:
>100_bases GGTGGGAGAGTGCTACTATCTGCGGTTTTGTGAATTAAATGCTGTGAACTATCGCGAACTCCTCCCATTCAAGTGGTGTT AAGCACTAAGATGGCAGGTT
Downstream 100 bases:
>100_bases CGCCAGCTATGATAACCACTCATGAATGATTTCGATCCAGCACTGATTTCCGCGATGAGCCTTATCCCTCAGACGAGGTC TCGGATGGAATCAATCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTSLKVTSSTDATNNNDAHFPEGPVVTVDWLSHNLDRDDVIVLCATMEDDEIARQAGIPGAFLADLEGDFSDPHSELPHT APPNLVGLLESYGISTDSTVVVYDLHGLMVAPRVWWLLRIAGLSSIGVLDGGLPAWVDAGLPTEPLSLPTGGGRISAEPQ PDLLVGASGVERAIARSSKAVIDARNASRFAGVEEEPRPGLRKGSIPGSVNIPFTDISDEHGFVRPAEELKELIFSRTNG AQSLVFSCGSGVTACVDAYAAVIAGYDDVVVYEGSWAEWGNPANQKPIA
Sequences:
>Translated_289_residues MTSLKVTSSTDATNNNDAHFPEGPVVTVDWLSHNLDRDDVIVLCATMEDDEIARQAGIPGAFLADLEGDFSDPHSELPHT APPNLVGLLESYGISTDSTVVVYDLHGLMVAPRVWWLLRIAGLSSIGVLDGGLPAWVDAGLPTEPLSLPTGGGRISAEPQ PDLLVGASGVERAIARSSKAVIDARNASRFAGVEEEPRPGLRKGSIPGSVNIPFTDISDEHGFVRPAEELKELIFSRTNG AQSLVFSCGSGVTACVDAYAAVIAGYDDVVVYEGSWAEWGNPANQKPIA >Mature_288_residues TSLKVTSSTDATNNNDAHFPEGPVVTVDWLSHNLDRDDVIVLCATMEDDEIARQAGIPGAFLADLEGDFSDPHSELPHTA PPNLVGLLESYGISTDSTVVVYDLHGLMVAPRVWWLLRIAGLSSIGVLDGGLPAWVDAGLPTEPLSLPTGGGRISAEPQP DLLVGASGVERAIARSSKAVIDARNASRFAGVEEEPRPGLRKGSIPGSVNIPFTDISDEHGFVRPAEELKELIFSRTNGA QSLVFSCGSGVTACVDAYAAVIAGYDDVVVYEGSWAEWGNPANQKPIA
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI61835204, Length=227, Percent_Identity=36.1233480176211, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI194473681, Length=227, Percent_Identity=36.1233480176211, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI194473668, Length=227, Percent_Identity=36.1233480176211, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI17402865, Length=259, Percent_Identity=34.3629343629344, Blast_Score=129, Evalue=4e-30, Organism=Escherichia coli, GI87082121, Length=270, Percent_Identity=35.5555555555556, Blast_Score=157, Evalue=5e-40, Organism=Escherichia coli, GI87081967, Length=250, Percent_Identity=28.4, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561888, Length=289, Percent_Identity=23.8754325259516, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71997283, Length=294, Percent_Identity=23.1292517006803, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30513; Mature: 30382
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLKVTSSTDATNNNDAHFPEGPVVTVDWLSHNLDRDDVIVLCATMEDDEIARQAGIPG CCCEEECCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCEEEEEEECCHHHHHHHHCCCC AFLADLEGDFSDPHSELPHTAPPNLVGLLESYGISTDSTVVVYDLHGLMVAPRVWWLLRI EEEECCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH AGLSSIGVLDGGLPAWVDAGLPTEPLSLPTGGGRISAEPQPDLLVGASGVERAIARSSKA HCCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCEECCCCCCCEEEECHHHHHHHHHCCHH VIDARNASRFAGVEEEPRPGLRKGSIPGSVNIPFTDISDEHGFVRPAEELKELIFSRTNG EEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC AQSLVFSCGSGVTACVDAYAAVIAGYDDVVVYEGSWAEWGNPANQKPIA HHHHEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCHHCCCCCCCCCCC >Mature Secondary Structure TSLKVTSSTDATNNNDAHFPEGPVVTVDWLSHNLDRDDVIVLCATMEDDEIARQAGIPG CCEEECCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCEEEEEEECCHHHHHHHHCCCC AFLADLEGDFSDPHSELPHTAPPNLVGLLESYGISTDSTVVVYDLHGLMVAPRVWWLLRI EEEECCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH AGLSSIGVLDGGLPAWVDAGLPTEPLSLPTGGGRISAEPQPDLLVGASGVERAIARSSKA HCCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCEECCCCCCCEEEECHHHHHHHHHCCHH VIDARNASRFAGVEEEPRPGLRKGSIPGSVNIPFTDISDEHGFVRPAEELKELIFSRTNG EEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC AQSLVFSCGSGVTACVDAYAAVIAGYDDVVVYEGSWAEWGNPANQKPIA HHHHEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]